| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,705,971 | C→A | 23.1% | intergenic (‑181/+127) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,705,971 | 0 | C | A | 23.1% | 440.9 / 124.0 | 182 | intergenic (‑181/+127) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base C (69/71); new base A (33/9); total (102/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.48e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.14e-01 | |||||||||||
Only 100 of 191 total aligned reads displayed.
GGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCT > NC_000913/3705873‑3706070 | gggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcg > 1:3034722/1‑100 (MQ=255) tGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGtt < 2:71224/100‑1 (MQ=255) tGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGtt < 1:3045970/100‑1 (MQ=255) gAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTa > 1:1229326/1‑100 (MQ=255) aaGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTa > 1:3186369/1‑99 (MQ=255) gTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAAc < 2:1888034/99‑1 (MQ=255) gTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACg > 1:3673142/1‑100 (MQ=255) aTTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGcc < 1:3240886/100‑1 (MQ=255) gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa > 1:721500/1‑100 (MQ=255) gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa > 1:2170085/1‑100 (MQ=255) ctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTAt > 1:1952097/1‑100 (MQ=255) ctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTAt > 1:1994346/1‑100 (MQ=255) gcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATcc > 2:590897/1‑100 (MQ=255) gacGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATcc > 2:2579282/3‑100 (MQ=255) ccGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCg < 1:3371274/100‑1 (MQ=255) cGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCgg < 2:2024779/100‑1 (MQ=255) cGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCgg < 1:2364407/100‑1 (MQ=37) cGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCgg < 2:2199478/100‑1 (MQ=37) ggATGGCGCTGCACGCAGAGGCACAGCGCTACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGc < 1:367745/100‑1 (MQ=25) ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGc < 2:654093/100‑1 (MQ=37) gATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGcc > 2:2642354/1‑100 (MQ=255) gATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGca < 1:1439088/100‑2 (MQ=37) gATGGCGCGGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTGTGGTTATGCCGGATGCGGCGTTATCGCCTTATCCGGcc < 1:1279210/100‑1 (MQ=25) tGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGCATa < 1:1804698/100‑1 (MQ=37) tGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGCATa < 2:3423502/100‑1 (MQ=37) gcgcTGCACGCAGAGGCACAGCGTCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑a < 1:511058/100‑1 (MQ=255) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATCCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑a < 1:2011271/100‑1 (MQ=255) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCAGCCTAC‑a > 1:363104/1‑100 (MQ=255) gcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCTGCGTTAACGCCTTATCCGGCCTAC‑aaa > 1:935600/1‑100 (MQ=255) gCACGCAGAGGCACAGCGCCACCGTATATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAAt > 1:1924241/1‑99 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCg < 2:573253/100‑1 (MQ=255) aCGCAGAGGCACAGCGCCACCGGGTATACAGACTGTTGAGAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑agaa > 1:3529737/1‑96 (MQ=255) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTg > 1:2084578/1‑100 (MQ=255) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTg > 2:3473030/1‑100 (MQ=21) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc < 1:2676683/100‑1 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc < 2:1254493/100‑1 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc < 2:749898/100‑1 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCa < 2:3103257/100‑1 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCa < 2:857784/100‑1 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCa > 1:2202194/1‑100 (MQ=255) caacgcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTGTGCCGGATGCGGCGTTAACACCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCa > 1:2379309/4‑98 (MQ=255) aGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATa < 2:1920368/100‑1 (MQ=255) gagcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATAc < 2:2470253/98‑1 (MQ=255) gcCACTGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACAt > 2:1213499/1‑100 (MQ=255) ccACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACAtt < 2:2182920/100‑1 (MQ=255) ccACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGACGGATGCGGCGTTAACGCCTTATTCGGCCTAC‑AAAATCGTGC‑AAATTCAATACAtt > 1:1894181/1‑100 (MQ=255) aCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGc < 2:1647400/100‑1 (MQ=255) aCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGc < 2:247163/100‑1 (MQ=255) ggTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGaa < 2:1264040/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑g < 2:492490/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑g < 2:1989021/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑g > 2:3218815/1‑100 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑g < 1:2800359/100‑1 (MQ=255) ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAgg < 1:1917468/100‑1 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGcc < 2:2951956/100‑1 (MQ=255) ttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCt > 2:1823407/1‑100 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTg > 1:2712378/1‑100 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTg > 1:3438451/1‑100 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATa > 1:3196531/1‑100 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGc < 1:3751427/100‑1 (MQ=255) tGCGCGTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCgg < 1:1307701/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGTCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgc > 1:2611423/1‑100 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGTTAAGCg > 2:2423031/1‑97 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGa < 1:2325865/98‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTGC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAg > 1:857020/1‑98 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg < 1:1419714/100‑1 (MQ=255) cttttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCATAC‑AAAAGCATGC‑AAATTCAATATATTGC‑‑AGAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAgcgc > 2:2007855/10‑100 (MQ=17) ttttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCATAC‑AAAATCGTGC‑TAATTCAATATATTGC‑‑AGAAA‑CCTT‑‑GTAGGCCTGATAAGCGTAGCGCa > 2:1505621/9‑100 (MQ=18) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCa > 2:3356334/1‑100 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCa > 2:301389/1‑100 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCa < 1:838261/100‑1 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCa < 2:1240099/100‑1 (MQ=255) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGC‑CAATTCAATATATTGC‑‑AGGAC‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCAt > 1:2726716/8‑100 (MQ=18) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTAT‑AAATTCAATGTATTGC‑‑AGTTT‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCAt > 2:2698219/8‑100 (MQ=21) tGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCAt > 1:1198358/1‑100 (MQ=255) ttgtaggCCGGATAAGGCGTTTACGCCGCATCTGGCCTAC‑AAATTCTTCC‑AAATTCAATATATTGC‑‑AGAAA‑TCAT‑‑GTAGGCCTGATAAGCGTAGCGCATc > 2:2307935/7‑100 (MQ=18) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATc > 1:2451771/1‑100 (MQ=255) gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCATAC‑AAATTC‑TGC‑AAATTCAACAAATTGC‑‑‑GAATCCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 1:1548395/5‑100 (MQ=18) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTT‑AAATTCAATATATTGC‑‑ACCAT‑CCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:1563847/5‑100 (MQ=21) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGA‑AAATTCAATATATTGC‑‑AGGAG‑CTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:2838790/5‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTAT‑AAATTCAATGTATTGC‑‑AGTTT‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAgg > 2:2889443/4‑100 (MQ=25) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCTTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAgg < 1:3496329/100‑1 (MQ=255) nggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑ATACCGCGC‑AAATTCAATATATTGCGGAGAAA‑AT‑‑‑‑GTAGGCCTGATAAGCGTAGCGCGTCAGGct > 1:2043341/3‑99 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGC‑AAATTCAACATATTGC‑‑AATTC‑TCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:1063249/3‑99 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGC‑AAATTCAATATATTGC‑‑AGGAA‑ACAC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGc > 2:172828/3‑100 (MQ=18) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa < 2:406035/100‑1 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa > 1:1379054/1‑100 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGC‑AAATTCAATATATTGC‑‑AGAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:386876/2‑100 (MQ=14) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGC‑CAATTCAATATATTGC‑‑AGGAC‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1389603/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGC‑AAATTCAATATATTGC‑‑‑‑AAT‑CTCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2116612/2‑100 (MQ=18) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 2:1460892/1‑100 (MQ=255) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:2885851/1‑100 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCTGGCCTAC‑AAATTCTTCC‑AAATTCAATATATTGC‑‑AGAAA‑TCAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 2:2975010/1‑99 (MQ=18) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAATGTGC‑AAATTCAATAAATTGC‑‑A‑AAT‑CAACATGTAGGCCGGATAAGCGCAGCGCATCAGGCa > 1:2571710/1‑100 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑GAAATCGTGC‑TAATTCAATATATTGT‑‑GGGCT‑CCAC‑‑GTAGGCCTGATAAGCGTAGCTCATCAGGCag > 1:2497197/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGC‑TAATTCAATATATTGC‑‑AGGGA‑CTAT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCag > 1:1217899/1‑99 (MQ=18) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:2232917/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:2341624/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:3025232/100‑1 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct < 1:3742334/100‑1 (MQ=255) | GGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGC‑AAATTCAATACATTGC‑‑AGAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCT > NC_000913/3705873‑3706070 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |