Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,033 IS1 (+) +9 bp intergenic (‑111/‑486) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1050545NA (NA)107 (1.200) 71/198 0.1 98.0% noncoding (768/768 nt) IS1 repeat region
?NC_000913 1293033 = 2 (0.020)intergenic (‑111/‑494) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 = 12930412 (0.020)95 (1.070) 74/198 0.1 97.7% intergenic (‑119/‑486) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 107 total aligned reads displayed.

CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1050447‑1050545
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAAC  >  NC_000913/1293033‑1293130
                                                                                                                                                                                                     
 GGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTG                                                                                                  <  2:2168109/100‑1
  GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGT                                                                                                 >  2:1561476/1‑100
  GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGT                                                                                                 >  1:1973738/1‑100
   AAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTG                                                                                                <  2:568926/100‑1
     GTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCC                                                                                              >  1:574396/1‑100
        GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCC                                                                                           <  2:1414523/100‑1
         CTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCA                                                                                          >  2:2133285/1‑100
         CTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCA                                                                                          >  1:313854/1‑100
         CTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCA                                                                                          <  1:2113803/100‑1
           GTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAAT                                                                                        <  2:273281/100‑1
              GTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAA                                                                                     >  2:599612/1‑100
               TTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAAT                                                                                    <  1:1915506/100‑1
                TCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATA                                                                                   <  1:1694272/100‑1
                  TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATC                                                                                 <  2:1719824/100‑1
                  TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATC                                                                                 <  2:1973724/100‑1
                  TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATC                                                                                 >  1:1420213/1‑100
                  TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATC                                                                                 >  1:467112/1‑100
                  TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATC                                                                                 >  2:103676/1‑100
                   CAAAATCGGTGGAGCTGCCTGACAAAGTCATCGGGCATTATCTGAACATAAACCACTATCAATTAGTTGGAGTCATTACCTGTGCCGCCAGTAAATATCT                                                                                <  2:749156/100‑1
                   CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCT                                                                                >  2:222063/1‑100
                   CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCT                                                                                >  2:186293/1‑100
                   CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCT                                                                                >  2:1618430/1‑100
                      AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTT                                                                             <  1:967876/100‑1
                      AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTT                                                                             <  2:2185521/100‑1
                       ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTC                                                                            <  2:1170588/100‑1
                             GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAA                                                                      >  2:2085661/1‑100
                                  TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGC                                                                 <  2:2170423/100‑1
                                   GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCC                                                                <  2:1139466/100‑1
                                   GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCC                                                                >  1:1445802/1‑100
                                   GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCC                                                                >  2:574715/1‑100
                                     ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAG                                                              >  2:33013/1‑100
                                     ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAG                                                              >  2:1623933/1‑100
                                     ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAG                                                              <  2:2028633/100‑1
                                     ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAAT                                                                     <  2:1286586/93‑1
                                      TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGA                                                             <  1:991350/100‑1
                                      TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGA                                                             <  1:1252599/100‑1
                                       GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATCAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAA                                                            <  2:1445793/100‑1
                                        ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAA                                                           >  1:28506/1‑100
                                         CAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAA                                                          >  2:176813/1‑100
                                          AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAG                                                         <  1:1391482/100‑1
                                          AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAG                                                         <  1:2133300/100‑1
                                           AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGA                                                        >  1:1963216/1‑100
                                                 TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGC                                                  >  2:507991/1‑100
                                                  CGGGCATTATCTGAACATAAAACACTATCAATAATTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGG                                                   <  2:415331/98‑1
                                                  CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCA                                                 >  2:906124/1‑100
                                                    GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATA                                               >  2:791036/1‑100
                                                      CATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATA                                             <  1:906131/100‑1
                                                       ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAG                                            >  2:1254824/1‑100
                                                        TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGC                                           <  2:28506/100‑1
                                                        TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGC                                           <  1:531581/100‑1
                                                         atctTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCC                                          <  1:890691/96‑1
                                                         TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCC                                          >  2:1843093/1‑100
                                                          ttccgatctTAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCC                                         <  1:1094692/91‑1
                                                          ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCC                                         <  1:1185217/100‑1
                                                           ctTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCT                                        <  2:835163/98‑1
                                                            CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTA                                       <  1:574718/100‑1
                                                            CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTA                                       <  2:1647321/100‑1
                                                             TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCagat                                      >  2:890684/1‑96
                                                             TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAg                                      >  1:835170/1‑99
                                                             TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT                                      >  1:1003650/1‑100
                                                              GAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCagat                                     >  2:1185210/1‑96
                                                               AACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTT                                    <  2:75057/100‑1
                                                               AACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTT                                    >  1:1351729/1‑100
                                                               AACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTT                                    >  2:2001945/1‑100
                                                                  ATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACA                                 >  1:1203023/1‑100
                                                                   TAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCagatcggaa                                >  2:1094685/1‑91
                                                                   TAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAC                                >  1:2046966/1‑100
                                                                    AAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACC                               <  1:2085676/100‑1
                                                                    AAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACC                               >  1:15240/1‑100
                                                                    AAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACC                               <  1:1623942/100‑1
                                                                    AAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACC                               >  2:13424/1‑100
                                                                      AACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGA                             >  2:479524/1‑100
                                                                        CACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATG                           <  1:1254831/100‑1
                                                                          CTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGAT                         >  2:866074/1‑100
                                                                              tAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCG                     <  1:1108021/99‑1
                                                                              CAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCG                     >  1:387928/1‑100
                                                                              CAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCG                     <  1:791043/100‑1
                                                                              CAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCG                     >  1:700518/1‑100
                                                                              CAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTC                      <  2:1530094/99‑1
                                                                               AATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGa                    >  2:1108014/1‑99
                                                                               AATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC                    >  1:1816280/1‑100
                                                                               AATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC                    <  2:1003643/100‑1
                                                                                 TAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAG                  >  1:1907033/1‑100
                                                                                 TAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAG                  <  2:1907021/100‑1
                                                                                   AGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCA                >  2:250459/1‑100
                                                                                   AGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCCATTTACACCGATGATTTCGCAGC                 >  2:1416995/1‑99
                                                                                       GGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTG            >  2:1781072/1‑100
                                                                                       GGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTG            >  2:199915/1‑100
                                                                                        GAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGA           <  1:2001960/100‑1
                                                                                         AGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAG          >  1:477583/1‑100
                                                                                            CATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTT       >  1:401976/1‑100
                                                                                            CATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTT       >  1:282261/1‑100
                                                                                            CATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTT       >  1:2215050/1‑100
                                                                                             ATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTA      <  2:1351720/100‑1
                                                                                             ATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTA      <  2:1203016/100‑1
                                                                                               TACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAA    >  1:1245496/1‑100
                                                                                               TACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAA    >  2:260296/1‑100
                                                                                                ACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAA   <  1:1561485/100‑1
                                                                                                 CCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAAC  <  1:1618439/100‑1
                                                                                                  CTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGGGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAAC  <  1:1417004/99‑1
                                                                                                                                                                                                     
CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1050447‑1050545
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAAC  >  NC_000913/1293033‑1293130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.