| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 147,727 | Δ12 bp | coding (760‑771/903 nt) | yadD → | transposase_31 family protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 147727 | 147738 | 12 | 79 [0] | [0] 78 | yadD | transposase_31 family protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 147726 | 0 (0.000) | 69 (0.830) | 48/186 | 0.9 | 100% | coding (759/903 nt) | yadD | transposase_31 family protein |
| ? | NC_000913 | 147739 = | 0 (0.000) | coding (772/903 nt) | yadD | transposase_31 family protein | |||||
TACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCAGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGC > NC_000913/147627‑147824 | tACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATT > 1:297670‑M1/1‑100 (MQ=255) aCTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTc > 1:1533684‑M1/1‑99 (MQ=255) tGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcag < 2:28195‑M1/100‑4 (MQ=255) aaCAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagca < 2:622960‑M1/100‑6 (MQ=255) aaGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcaggg < 2:1264680‑M1/100‑9 (MQ=255) gATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagac < 2:158936‑M1/100‑14 (MQ=255) gATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagac < 2:963179‑M1/100‑14 (MQ=255) ttGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacagg < 2:92933‑M1/100‑17 (MQ=255) ttGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacagg < 2:1645276‑M1/100‑17 (MQ=255) gTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaa > 1:789509‑M1/1‑82 (MQ=255) gTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaa < 1:510161‑M1/100‑19 (MQ=255) tACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaa > 2:588459‑M1/1‑78 (MQ=255) aCGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaag < 1:1575165‑M1/100‑24 (MQ=255) gtgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcagg < 2:778717‑M1/100‑29 (MQ=255) gtgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcagg > 2:1180643‑M1/1‑72 (MQ=255) gtgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcagg < 1:1809697‑M1/100‑29 (MQ=255) gtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaa > 2:972529‑M1/1‑70 (MQ=255) gtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaa > 1:1458652‑M1/1‑70 (MQ=255) gtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaa > 1:1269077‑M1/1‑70 (MQ=255) gtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcagga > 2:1964378‑M1/1‑70 (MQ=255) tGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaatt > 2:1898028‑M1/1‑68 (MQ=255) tGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaatt > 1:348512‑M1/1‑68 (MQ=255) gagaCAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgc > 2:256424‑M1/1‑65 (MQ=255) gagaCAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgc > 2:1955507‑M1/1‑65 (MQ=255) gagaCAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgc > 1:506294‑M1/1‑65 (MQ=255) gaCAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTGTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgccc > 2:362046‑M1/1‑63 (MQ=255) aCAGGGAAACGGGAGGGGAGTCTATGAGGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgccca < 1:2208694‑M1/100‑39 (MQ=255) cAGGGAGACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggacttcgcccag < 2:588687‑M1/100‑40 (MQ=255) cAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccag > 1:1844052‑M1/1‑61 (MQ=255) cAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccag > 1:1985686‑M1/1‑61 (MQ=255) aGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagc < 2:1178360‑M1/100‑41 (MQ=255) gggAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcg > 2:1731034‑M1/1‑59 (MQ=255) gggAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcg < 2:1844040‑M1/100‑42 (MQ=255) gggAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcg > 1:632213‑M1/1‑59 (MQ=255) cGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttct < 1:1582624‑M1/100‑48 (MQ=255) cGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttct > 2:2242004‑M1/1‑53 (MQ=255) gggaggggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctg < 2:33052‑M1/100‑49 (MQ=255) gggaggggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctg < 2:1146248‑M1/100‑49 (MQ=255) gggaggggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTaagcaaggaagacaggaagtaagtcaggaattcgcccagcgtcttctg < 2:104617‑M1/100‑49 (MQ=255) ggaggggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctga > 2:297175‑M1/1‑51 (MQ=255) aggggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagt < 1:633370‑M1/100‑52 (MQ=255) ggggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagta > 1:1623569‑M1/1‑48 (MQ=255) ggggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagta > 1:1938000‑M1/1‑48 (MQ=255) ggctaTGATGACGCGGGCGAAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaaggcaggaattcgcccagcgtcttctgagtaaagg < 2:2153751‑M1/97‑57 (MQ=255) gTCTATGATGACGCTGGCGCCGTGGTTTGCAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggcattcgcccagcgtcttctgagtaaagga > 2:1425495‑M1/1‑43 (MQ=255) gTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagaaaagga > 2:1915633‑M1/1‑43 (MQ=255) cTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaat > 2:710757‑M1/1‑41 (MQ=255) tgatggCGGTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtctgctgaggaaaggaatgtc > 2:329392‑M1/1‑38 (MQ=255) gatgaCGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtct > 1:173971‑M1/1‑37 (MQ=255) gatgaCGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtct > 1:115030‑M1/1‑37 (MQ=255) gatgaCGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtct > 1:2233365‑M1/1‑37 (MQ=255) gcgcAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaaggcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacg < 2:479955‑M1/100‑74 (MQ=255) aGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgc < 1:256427‑M1/100‑78 (MQ=255) aGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgc < 1:1955521‑M1/100‑78 (MQ=255) gTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgca < 2:716866‑M1/100‑79 (MQ=255) gTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgca > 1:1189755‑M1/1‑22 (MQ=255) ggTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcaga < 1:1898040‑M1/100‑81 (MQ=255) gTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagag > 1:2027438‑M1/1‑19 (MQ=255) tttGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagaga > 1:1868004‑M1/1‑18 (MQ=255) ttGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagat < 2:1565431‑M1/100‑84 (MQ=255) ttGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagat < 2:297667‑M1/100‑84 (MQ=255) gAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatg < 2:1813105‑M1/99‑85 (MQ=255) aaGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggc < 1:972537‑M1/100‑87 (MQ=255) agagAAAGGGATTcagcagggaagacaggaagtaagtaaggaattcgcccagcgtcttctgagtaaagaaatgtcccgggaagacgttgcagagatggca > 2:709820‑M1/1‑13 (MQ=255) gagaAAGGGATTcagcagggaagacagaaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaa > 1:1730134‑M1/1‑12 (MQ=255) gaAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaat > 1:1100046‑M1/1‑10 (MQ=255) gaAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaat < 1:329395‑M1/100‑91 (MQ=255) gaAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaat > 1:1951016‑M1/1‑10 (MQ=255) aaGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaattt > 2:570801‑M1/1‑8 (MQ=255) aaGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaattt > 2:807118‑M1/1‑8 (MQ=255) gggATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttac > 1:1625681‑M1/1‑6 (MQ=255) gggATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttac < 2:1269070‑M1/100‑95 (MQ=255) tctttcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacc < 1:1333172‑M1/97‑96 (MQ=255) ggATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacc < 2:1697835‑M1/100‑96 (MQ=255) ggATTcagcagggaagaaaggaaataagtcaggaatacgcacagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaattta < 2:1233661‑M1/98‑94 (MQ=255) aTTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacct > 2:560680‑M1/1‑3 (MQ=255) ttcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctct > 2:40307‑M1/1‑2 (MQ=255) ttcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctct > 2:1613157‑M1/1‑2 (MQ=255) ttcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttaccaga > 2:1333163‑M1/1‑2 (MQ=255) | TACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCAGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGC > NC_000913/147627‑147824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |