Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,781,140	0	A	G	20.0%	177.4 / 10.8	82	intergenic (+123/‑75)	lldD/trmL	L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent
Reads supporting (aligned to +/- strand):  ref base A (50/14);  new base G (0/16);  total (50/32)
Fisher's exact test for biased strand distribution p-value = 5.39e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAA  >  NC_000913/3781041‑3781238                                                                                                    |                                                                                                     cccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgaga                                                                                                      <  2:567730/100‑1 (MQ=255)     ctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGc                                                                                                  >  2:2015089/1‑100 (MQ=255)      tcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGcc                                                                                                 <  1:1460591/100‑1 (MQ=255)       cccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCGCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑g                                                                                               >  2:1826496/1‑100 (MQ=255)       cccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑g                                                                                               >  2:2255902/1‑100 (MQ=255)       cccTCAGGGAGAGGGGACCGTGCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACGGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag                                                                                                     <  2:2174850/95‑1 (MQ=255)          tCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑gggg                                                                                            <  2:71257/100‑1 (MQ=255)            aGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTg                                                                                          <  2:30668/100‑1 (MQ=255)             gggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGa                                                                                         >  1:1152569/1‑100 (MQ=255)             gggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGa                                                                                         >  1:1066072/1‑100 (MQ=255)             gggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGa                                                                                         >  2:1055004/1‑100 (MQ=255)                agagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAggg                                                                                      <  2:1951707/100‑1 (MQ=255)                   ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑aa                                                                                  >  2:2136249/1‑100 (MQ=255)                     ggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑aaaa                                                                                >  1:840052/1‑100 (MQ=255)                        ccGTTCGGCGCTGTATGTTCTCCCTCACTCTGAAACGACACCGCGCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGc                                                                             <  1:1826508/100‑1 (MQ=255)                        ccGTTCGGCGCTGTATGTCCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGc                                                                             <  1:844428/100‑1 (MQ=255)                        ccGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGc                                                                             <  1:1052518/100‑1 (MQ=255)                         cGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGcc                                                                            >  2:2129567/1‑100 (MQ=255)                          gTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCg                                                                           >  2:746556/1‑100 (MQ=255)                          gTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCg                                                                           >  1:1066082/1‑100 (MQ=255)                             cGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCAc                                                                        >  2:1368981/1‑100 (MQ=255)                             cGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCAc                                                                        >  2:1369392/1‑100 (MQ=255)                               gcgcTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTg                                                                      >  1:1094928/1‑100 (MQ=255)                                 gcTGCATGTCCTCCCCCCCTCTGAACCAACACCCCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGCGAGGGCC‑GGGGAGAGAGA‑AAAAGGCCGCGCTGc                                                                     <  2:1634964/99‑1 (MQ=255)                                  cTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTc                                                                   >  1:683745/1‑100 (MQ=255)                                    gtatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTTCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCAc                                                                 >  2:656104/1‑100 (MQ=255)                                    gtatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCAc                                                                 >  1:1171862/1‑100 (MQ=255)                                      atgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCa                                                               >  1:495791/1‑100 (MQ=255)                                      atgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCa                                                               >  1:61317/1‑100 (MQ=255)                                       tgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGTGTGAGGGG‑AAAAGGCCGCACTGCTCACCaa                                                              >  2:1255364/1‑100 (MQ=255)                                       tgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCaa                                                              >  1:764555/1‑100 (MQ=255)                                        gtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAAt                                                             >  2:2114585/1‑100 (MQ=255)                                           cTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAAtttt                                                          >  1:458676/1‑100 (MQ=255)                                           cTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAAtttt                                                          >  1:1807038/1‑100 (MQ=255)                                             cctccACCCTGAACCGACGCCGGACTTGTTTTTCCCCCCCAGCGCCGCCGGGGAGGGGGCC‑GGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTc                                                         <  2:144065/95‑1 (MQ=255)                                             cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCTCTCTCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCt                                                        >  2:944006/1‑100 (MQ=255)                                             cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCt                                                        >  2:1105174/1‑100 (MQ=255)                                             cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCt                                                        >  1:1946670/1‑100 (MQ=255)                                             cccTCACTCTGAAACGACACCGAACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCt                                                        >  2:1314345/1‑100 (MQ=255)                                              ccacactgggAAACGACCCCGCTCTCTTTTTTTCCCCTACACCCGTAGGGGGAGTGGTCC‑GGGGGGAGGGG‑AAAAGGCCGCACTGCGCACCAATTTTCTg                                                       <  1:410363/91‑1 (MQ=255)                                              ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCGCTCTCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTg                                                       >  1:1587807/1‑100 (MQ=255)                                               ccccctggaaaaCGACCCCCCCCT‑TTTTTTTCCCCCCCCCCCCCCCGGGGGGGGGGGC‑GGGGGGGGGGGAAAAAGGCCGCACTGCTCACCAATTTTCTGc                                                      <  1:1723584/91‑1 (MQ=255)                                               cTCACTCTGAAACGACACCGCCCTCTTTTTTTCCCCCTGGCCCCTCCGGGGAGAGGGCG‑GGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGc                                                      <  2:495788/100‑1 (MQ=255)                                                   ctctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATc                                                  >  1:1308497/1‑100 (MQ=255)                                                   ctctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATc                                                  >  1:1460728/1‑100 (MQ=255)                                                   ctctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATc                                                  >  1:639826/1‑100 (MQ=255)                                                   ctctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGCGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATc                                                  >  1:1102601/1‑100 (MQ=255)                                                     ctGAAACGACACCGCACTCTTTTTTTTTTTTTTTCACCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑ATAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt                                                >  2:804727/1‑100 (MQ=255)                                                     ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATTCt                                                >  1:733135/1‑100 (MQ=255)                                                        aagcGACACCGCACTCTTTTTTTCCCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcc                                             <  2:438752/97‑1 (MQ=255)                                                           cccccccGCACTTTTTTTTCCCCCCCCCCCCCTCGGGGGAGGGGGCG‑GGGGGGGGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc                                           <  1:2129582/94‑1 (MQ=255)                                                              ccccGCCCTCTTTTTTCCTCCCCCGCCCCGCGGGGGGGGGGGCG‑GGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGc                                        <  2:1603970/97‑1 (MQ=255)                                                              cacCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCa                                       >  2:873691/1‑100 (MQ=255)                                                               cccGCTCTCTTTTTTTCCCCCCCGCCCCTGCGGGGGAGGGGCC‑GGGTGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCg                                         <  1:1314354/96‑1 (MQ=255)                                                               cccGCCCTCTTTTTTTCTCCCCCGCCCCTCCGGGGAGGGGCCC‑GGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCAc                                      <  1:2017037/99‑1 (MQ=255)                                                                ccgctttttttttttCCCCCCCCCCCCCCCGGGGGGGGGGGCGGGGGGGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcc                                             <  1:1127736/85‑1 (MQ=255)                                                                ccGCACTC‑TTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa                                    >  1:1076010/1‑100 (MQ=255)                                                                 cGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa                                    >  1:1253197/1‑100 (MQ=255)                                                                  gCACTCTTTTTTTTTTTTTCTCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTaa                                   >  2:1571270/1‑100 (MQ=255)                                                                   cgttgttttttgCCCCCGCCCCCCTCGGGGGGGGGGGCG‑GGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCAc                                      <  2:1308488/91‑1 (MQ=255)                                                                     ctctTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg                                >  2:377381/1‑100 (MQ=255)                                                                        tttttttCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc                             >  1:1716936/1‑100 (MQ=255)                                                                        tttttttCCCCCCCCCCCCTCCGGGGGGGGGGCC‑GGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg                                <  2:61315/97‑1 (MQ=255)                                                                         ttttttCCCCCCCCCCCCCCCGGGGGAGGGGCC‑GGGGGGGGGGGAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc                             <  1:746563/100‑1 (MQ=255)                                                                         ctcttccgatcTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCa                            <  1:1803910/90‑1 (MQ=255)                                                                          tttttCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAg                           >  2:1778398/1‑100 (MQ=255)                                                                           ttttCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGt                          >  2:2127257/1‑100 (MQ=255)                                                                               ctcCCTCGCCCCCCGGGGGAGAGGGCC‑GGGGGGAGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc                      <  2:1094921/100‑1 (MQ=255)                                                                               ccccccccccccccGGGGGAGGGGGCG‑GGGTCGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc                      <  1:2255917/92‑1 (MQ=255)                                                                                 ccccccccccTCCGGGGAGGGGGCC‑GGGGTGAGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa                    <  2:1152562/94‑1 (MQ=255)                                                                                 cccTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCATTTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa                    >  2:1587898/1‑100 (MQ=255)                                                                                 cccTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa                    >  1:612635/1‑100 (MQ=255)                                                                                 cccTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa                    >  2:2089839/1‑100 (MQ=255)                                                                                  ccTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa                   >  1:1354663/1‑100 (MQ=255)                                                                                  ccTCCCCCCCCGGGGGAGGGGCCG‑GGGGTGAGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa                   <  1:1368990/100‑1 (MQ=255)                                                                                   cTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAgatcggaaga                  >  2:1477648/1‑91 (MQ=255)                                                                                     cgcgccgcgggggggCGGGCG‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAAc                 <  1:2254686/90‑1 (MQ=255)                                                                                     cGCCCCCCGGGGGGGGGGGCC‑GGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa                  <  2:111274/98‑1 (MQ=255)                                                                                      gCCCCTGCGGGGGGGGGGCC‑GGGGGGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa                    <  2:1295481/95‑1 (MQ=255)                                                                                      ctcccTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACAt               <  2:1047580/98‑1 (MQ=255)                                                                                        cccTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACAtag             >  1:1047587/1‑98 (MQ=255)                                                                                             cGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACtt        >  1:1304543/1‑100 (MQ=255)                                                                                              ggggggAGGGCG‑GGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTAc          <  2:1102594/97‑1 (MQ=255)                                                                                              ggggAGGGGGCG‑GGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt       <  2:1076003/100‑1 (MQ=255)                                                                                                  cgagGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACg    >  1:772365/2‑99 (MQ=255)                                                                                                   gagGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGaa  >  2:421740/1‑100 (MQ=255)                                                                                                    |                                                                                                     CCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAA  >  NC_000913/3781041‑3781238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑