New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1269275NA (NA)29 (0.230) 11/162 NT 21.3% coding (1/108 nt) ldrA toxic polypeptide, small
?NC_000913 = 1269313 118 (0.840)intergenic (‑38/+390) ldrA/ldrB toxic polypeptide, small/toxic polypeptide, small

GTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATatagccgc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1269177‑1269275
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATT  <  NC_000913/1269313‑1269207
                                                                                                                                                                                                              
GTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATA                                                                                                            <  1:1339580/100‑1
GTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATA                                                                                                            >  2:740743/1‑100
GTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATA                                                                                                            >  1:3798191/1‑100
 TTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATAT                                                                                                           <  2:1197011/100‑1
   ACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAG                                                                                                         >  2:2024192/1‑100
   ACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAG                                                                                                         <  2:504778/100‑1
   ACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCAAGAAAATCATGGCAAACTGCGCGAGCGTCATATAG                                                                                                         >  1:3108738/1‑100
    CGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGC                                                                                                        >  1:2424140/1‑100
    CGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGC                                                                                                        >  2:2258485/1‑100
    CGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGC                                                                                                        >  1:2924422/1‑100
    CGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGC                                                                                                        <  2:2742834/100‑1
    CGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGC                                                                                                        >  1:247347/1‑100
    CGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGC                                                                                                        >  1:770853/1‑100
     GCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAGAATCATGGCAAACTGCGCGAGCGTCATATAGCC                                                                                                       <  2:2365591/100‑1
     GCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCC                                                                                                       >  2:464802/1‑100
     GCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCC                                                                                                       >  1:1826172/1‑100
     GCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCC                                                                                                       >  1:1782588/1‑100
     GCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTACCCGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCC                                                                                                       >  2:1880375/1‑100
     GCCACCAGCTGACAATCGCTGCGGTAATAATTCACGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAG                                                                                                         >  2:1474840/1‑98
      CCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCG                                                                                                      >  1:200115/1‑100
      CCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCG                                                                                                      >  1:2814318/1‑100
      CCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCG                                                                                                      >  1:1610119/1‑100
      CCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCG                                                                                                      >  2:627794/1‑100
      CCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCG                                                                                                      >  2:2121773/1‑100
                                  ATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGC                                                                          <  1:132610/100‑1
                                   TTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCT                                                                         <  2:49598/100‑1
                                   TTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCT                                                                         <  2:51416/100‑1
                                    TCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTA                                                                        <  1:2842428/100‑1
                                    TCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTA                                                                        <  1:589005/100‑1
                                     CCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTA                                                                        <  2:712118/99‑1
                                      CCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATA                                                                      <  2:3062505/100‑1
                                      CCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATA                                                                      <  1:3464635/100‑1
                                       CGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATAT                                                                     <  2:300700/100‑1
                                       CGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATAT                                                                     <  1:2373199/100‑1
                                        GCCAGGATCGGTGCTGCCCGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATAT                                                                     <  1:257700/99‑1
                                        GCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTGATATAGGCGCAAAATGTTGTCATTACAACAAGGCGGCTATATG                                                                    <  2:1191940/100‑1
                                        GCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATG                                                                    <  1:2616418/100‑1
                                        GCCAGGAGCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATG                                                                    <  1:3198537/100‑1
                                         CCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGA                                                                   <  2:2632823/100‑1
                                         CCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATGACAACAAGGCGGCTATATGA                                                                   <  2:2418620/100‑1
                                          CAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGAC                                                                  <  2:13064/100‑1
                                          CAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGAC                                                                  <  1:1532091/100‑1
                                          CAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGAC                                                                  <  1:1315445/100‑1
                                          CAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGAC                                                                  <  1:1458322/100‑1
                                           AGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAACTGTTGTCATTACAACAAGGCGGCTATATGACG                                                                 <  1:3750480/100‑1
                                           AGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACa                                                                 <  2:3294510/100‑2
                                           AGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACG                                                                 <  1:2022348/100‑1
                                           AGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACG                                                                 <  1:3226248/100‑1
                                            gggTCGGTGCCGCGAGGTCGTGGCAGAAAGGCATGGGAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGA                                                                   <  2:2426632/94‑1
                                               TCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCG                                                             <  2:3163030/100‑1
                                                CGGTGCTGCGAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCTCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGt                                                                <  2:1203144/96‑2
                                                           GGTCGTACAAGAAAATCATGTAAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACG                                                                 <  2:3036767/84‑1
                                                                  CCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTT                                          <  1:934769/100‑1
                                                                                                   ATAGCCGCAAAATGTTGTCATTACAACAAGGTGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGG         >  1:2563041/1‑100
                                                                                                   ATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGG         <  2:3867101/100‑1
                                                                                                    TAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGA        >  2:452911/1‑100
                                                                                                     AGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAA       >  1:2976276/1‑100
                                                                                                     AGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAA       <  2:1166077/100‑1
                                                                                                      cCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAA       >  2:1789965/2‑99
                                                                                                      GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAAT      >  1:2860532/1‑100
                                                                                                      GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAAT      >  1:3113556/1‑100
                                                                                                      GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAAT      >  2:2983643/1‑100
                                                                                                      GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAAT      >  1:1831717/1‑100
                                                                                                      GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAAT      >  1:2601980/1‑100
                                                                                                      GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAAT      >  1:3304780/1‑100
                                                                                                      GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAAT      >  2:3470205/1‑100
                                                                                                      GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAAT      <  2:3884902/100‑1
                                                                                                      GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTAGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAA       <  2:3289173/99‑1
                                                                                                      GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCGCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCCGGAA       >  1:1752837/1‑99
                                                                                                       CCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATT     <  2:936847/100‑1
                                                                                                       CCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATT     <  2:1912560/100‑1
                                                                                                        CGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTA    <  2:1590108/100‑1
                                                                                                        CGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTA    >  1:997248/1‑100
                                                                                                         GCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTAT   >  2:2710626/1‑100
                                                                                                         GCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTAT   >  2:60655/1‑100
                                                                                                          CAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTAat  <  1:2677289/100‑3
                                                                                                          CAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATT  <  1:3162729/100‑1
                                                                                                          CAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATT  <  1:1443057/100‑1
                                                                                                          CAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATT     >  2:1224482/1‑97
                                                                                                          CAAAATGTTGTCATTACAACAAGGCGGCTATAGGACGCTCGCGCAGTTTGCCAGGAGTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATT  <  2:2102974/100‑1
                                                                                                                                                                                                              
GTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATatagccgc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1269177‑1269275
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATT  <  NC_000913/1269313‑1269207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.