| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4531468 = | 156 (1.100) | 9 (0.070) | 5/168 | NT | 6.0% | coding (184/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain |
| ? | NC_000913 | 4531508 = | 135 (1.010) | coding (144/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
GTCATGCTGTGCGAATTCAGGCGTCAGGCAAAAGAGGTCTGGCGAGACAGGCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4531570‑4531468‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgacGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTCCTGAAATCGCATT > NC_000913/4531508‑4531606 GTCATGCTGTGCGAATTCAGGCGTCAGGCAAAAGAGGTCTGGCGAGACAGGCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGC < 2:3921764/100‑1GTCATGCTGTGCGAATTCAGGCGTCAGGCAAAAGAGGTCTGGCGAGACAGGCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGC < 2:3715844/100‑1GTCATGCTGTGCGAATTCAGGCGTCAGGCAAAAGAGGTCTGGCGAGACAGGCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGC < 1:2896618/100‑1GTCATGCTGTGCGAATTCAGGCGTCAGGCAAAAGAGGTCTGGCGAGACAGGCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGC < 2:3683685/100‑1 TCATGCTGTGCGAATTCAGGCGTCAGGCAAAAGAGGTCTGGCGAGACAGGCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCG < 1:1351064/100‑1 TCATGCTGTGCGAATTCAGGCGTCAGGCAAAAGAGGTCTGGCGAGACAGGCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCG > 2:2331641/1‑100 TCATGCTGTGCGAATTCAGGCGTCAGGCAAAAGAGGTCTGGCGAGACAGGCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCG < 1:532049/100‑1 TCATGCTGTGCGAATTCAGGCGTCAGGCAAAAGAGGTCTGGCGAGACAGGCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCG < 1:3595696/100‑1 ATGCTGTGCGAATTCAGGCGTCAGGCAAAAGAGGTCTGGCGAGACAGGCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGAC < 2:400300/100‑1 ATGCTGTGCGAATTCAGGCGTCAGGCAAAAGAGGTCTGGCGAGACAGGCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGAC < 1:1491993/100‑1 GCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGA > 1:1500815/1‑100 GGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCG > 1:106459/1‑100 TGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACA > 1:1184671/1‑100 TGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACA > 1:3469657/1‑100 CGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCA > 1:3906156/1‑100 CGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCA > 1:3577596/1‑100 GTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCAT > 1:954537/1‑100 GTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCAT > 1:320744/1‑100 GTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCAT > 1:1465096/1‑100 GCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTCCTGAAATCG < 1:1616970/100‑1 CGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTCCTGAAATCGC > 1:2751418/1‑100 CGACATTCCCGAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCCCAGCATGACGTCAGCGACAGCGTTTTCGTGTCCTGAAATCGCAT < 2:1808877/99‑1 CGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTCCTGAAATCGCATT > 2:1987234/1‑100 GTCATGCTGTGCGAATTCAGGCGTCAGGCAAAAGAGGTCTGGCGAGACAGGCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4531570‑4531468‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgacGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTCCTGAAATCGCATT > NC_000913/4531508‑4531606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |