| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4588347 = | 173 (1.220) | 5 (0.040) | 5/166 | NT | 3.2% | coding (519/957 nt) | yjiA | metal‑binding GTPase |
| ? | NC_000913 | 4588379 = | 143 (1.090) | coding (487/957 nt) | yjiA | metal‑binding GTPase | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
TGAACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4588450‑4588347‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctgCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCATCCA > NC_000913/4588379‑4588477 TGAACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACG > 2:781011/1‑100TGAACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACG < 2:724551/100‑1TGAACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACG > 2:2505800/1‑100TGAACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACG < 1:254423/100‑1TGAACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACG < 1:3529921/100‑1 GAACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGC < 1:3764876/100‑1 AACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGCC > 1:1473802/1‑100 AACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGCC < 2:934760/100‑1 AACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGCC > 1:3670347/1‑100 AACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGCC < 1:2356944/100‑1 AACCAGTCCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGCC > 1:2077267/1‑100 ACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGCCT < 1:1066272/100‑1 ACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGCCT > 2:3412940/1‑100 TGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGCCTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGT > 1:1867613/1‑100 GACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGCCTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGT > 1:520555/1‑100 GTCGCAGGCGAAGCAGAAAAACTGCATGAACGCCTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAA > 1:678617/1‑100 TCGCAGGCGAAGCAGAAAAACTGCATGAACGCCTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAAC > 1:215262/1‑100 GGCGAAGCAGAAAAACTGCATGAACGCCTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTT > 2:1127095/1‑100 gaccgaaataTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATG < 2:2630905/90‑1 GCCTGCGACGTCGGTTTTGGTCAGCAGACTGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCA > 2:1854179/1‑100 GCCTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCA < 1:3298229/100‑1 GCCTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCA > 2:3004211/1‑100 GCCTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCA > 1:8316/1‑100 GCCTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCA > 1:1694829/1‑100 CCTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCAT > 2:2029646/1‑100 CCTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCAT > 2:3708131/1‑100 CCTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCAT > 1:523902/1‑100 CTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCATC > 2:1755442/1‑100 CTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCATC > 2:1103176/1‑100 CTGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCATC < 1:2647080/100‑1 TGCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCATCC > 2:90122/1‑100 GCGACGTCGGTTTTGGTCAGGAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCATCCA > 2:2412969/1‑100 TGAACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4588450‑4588347‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctgCGACGTCGGTTTTGGTCAGCAGAATGCGGTCGGCGTAGCCAACCTGTGACTGGGCGATGGTGAACTGGTTCATCTGCTCATCGGCATGTACCGCATCCA > NC_000913/4588379‑4588477 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |