| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4588805 | 130 (0.920) | 6 (0.050) | 5/164 | NT | 4.5% | coding (61/957 nt) | yjiA | metal‑binding GTPase |
| ? | NC_000913 | = 4588819 | 137 (1.050) | coding (47/957 nt) | yjiA | metal‑binding GTPase | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
CGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCAATCTTGTAGCCGTGCTGTTCGTTAAGAATATGGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4588701‑4588805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcagGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAAC < NC_000913/4588819‑4588721 CGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCAATCTTGTAGCCGTGCTGTTCGTTAAGAATATGG > 1:2512104/1‑100CGTGGCGCGGTCGCCAATCAGTTGATAATCAACAAAGACTTCGCCGAATTCGTTTTCAATCACGGCAATCTTGTAGCCGTGCTGTTCGTTAAGAATATGG > 2:1727196/1‑100 GTGGCGCGGTCGGCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCAATCTTGTAGCCGTGCTGTTCGTTAAGAATATGGC < 2:840143/100‑1 GTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCAATCTTGTAGCCGTGCTGTTCGTTAAGAATATGGC < 2:1513843/100‑1 TGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCAATCTTGTAGCCGTGCTGTTCGTTAAGAATATGGCG < 1:3243214/100‑1 CGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCAATCTTGTAGCCGTGCTGTTCGTTAAGAATATGGCGCAG < 2:858792/100‑1 TCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCAATCTTGTAGCCGTGCTGTTCGTTAAGAATATGGCGCAGGAAAAACCACCCTGCTGCGCCAT < 1:1614894/100‑1 TCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCAATCTTGTAGCCGTGCTGTTCGTTAAGAATATGGCGCAGGAAAAACCACCCTGCTGCGCCAT < 1:1614710/100‑1 AACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCAATCTTGTAGCCGTGCTGTTCGTTAAGAATATGGCGCAGGAAAAACCACCCTGCTGCGCCATAT < 1:1655088/100‑1 ACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCAATCTTGTAGCCGTGCTGTTCGTTAAGAATATGGCGCAGGAAAAACCACCCTGCTGCGCCATATT < 1:1029203/100‑1 ACTTCGCCGAATTCGTTTTCAATCACGGCAATCTTGTAGCCGTGCTGTTCGTTAAGAATATGGCGCAGGAAAAACCACCCTGCTGCGCCATATTCTTAAC < 1:2216166/100‑1 TCTTGTAGCCGTGCTGTTCGTTAAGAATATAGCGCAGGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTG < 1:1580083/100‑1 tccgatctAGGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTn < 1:2040835/92‑2 GGCGCAGGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATG > 1:334643/1‑100 GCGCAGGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATG < 2:3174850/99‑1 CGCAGGAAAAACCACCCTGCTGCGCCATATTCTTAACGACCAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTG > 2:3520313/1‑95 CGCAGGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGAT > 2:1520413/1‑100 CGCAGGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGAT > 2:99677/1‑100 GCAGGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATC > 1:1102422/1‑100 CAGGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCA < 2:127483/100‑1 CAGGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCA > 1:859224/1‑100 nGGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGAgatcgga > 2:2040824/2‑93 AGGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAA > 1:1982331/1‑100 GGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAAC > 2:2468059/1‑100 GGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAAC > 1:3666305/1‑100 GGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAAC > 1:3197563/1‑100 GGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAAC < 1:2841437/100‑1 CGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCAATCTTGTAGCCGTGCTGTTCGTTAAGAATATGGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4588701‑4588805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcagGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAAC < NC_000913/4588819‑4588721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |