| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 580768 | 127 (0.900) | 21 (0.180) | 10/146 | NT | 17.1% | intergenic (‑323/‑66) | ylcI/nohD | DUF3950 family protein, DLP12 prophage/DLP12 prophage; DNA packaging protein |
| ? | NC_000913 | = 580793 | 100 (0.870) | intergenic (‑348/‑41) | ylcI/nohD | DUF3950 family protein, DLP12 prophage/DLP12 prophage; DNA packaging protein | |||||
Only 100 of 234 total aligned reads displayed.
CTATTTATGAAAATTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACAT > NC_000913/580669‑580865 | cTATTTATGAAAATTTTCCGGTTTAAGGTGTTTCCTTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAG > 2:1354351‑M1/1‑100 (MQ=255)cTATTTATGAAAATTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAG > 1:2477823‑M1/1‑100 (MQ=255) tATTTATGAAAATTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAgg < 2:80342/100‑1 (MQ=255) tATTTATGAAAATTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAgg < 1:3354449/100‑1 (MQ=255) tATTTATGAAAATTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAgg < 1:1809131/100‑1 (MQ=255) aTGAAAATTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTg > 1:1439271/1‑100 (MQ=255) tGAAAATTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGa > 2:2410853/1‑100 (MQ=40) tGAAAATTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGa > 2:2597801/1‑100 (MQ=255) gAAAATTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGaa > 2:507979/1‑100 (MQ=255) gAAAATTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGaa > 1:166680/1‑100 (MQ=255) aaaaTTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGaaa > 1:1990118/1‑100 (MQ=255) aaaTTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAg < 1:412100/100‑1 (MQ=255) aaaTTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTGATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAg < 1:346305/100‑1 (MQ=255) tttCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAg > 2:3847250/1‑100 (MQ=255) ttCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGc > 1:3807618/1‑100 (MQ=255) ttCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGc > 2:1744481/1‑100 (MQ=255) ttCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGc < 1:1898206/100‑1 (MQ=255) tCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATTCCCCCTGAAAAAAAAGGAAACGACAGGTGCTGAAAGCGAg > 2:3945947/1‑98 (MQ=255) ggTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCtttt < 1:3563309/100‑1 (MQ=255) ggTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCtttt < 1:3238711/100‑1 (MQ=255) ggTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCCGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCtttt > 1:3854667/1‑100 (MQ=255) tttAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTg < 2:2988965/100‑1 (MQ=255) tAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGc > 2:1241900/1‑100 (MQ=255) aaGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGcc < 1:3741364/100‑1 (MQ=255) aGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCct < 1:3108049/100‑1 (MQ=255) ggTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTc < 1:1823709‑M2/100‑2 (MQ=255) tgtTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctg > 2:122311‑M2/1‑97 (MQ=255) gtTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgt > 2:589639‑M2/1‑96 (MQ=255) tttCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtc > 1:1659‑M2/1‑95 (MQ=255) tttCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtc > 2:40051‑M2/1‑95 (MQ=255) ttCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcg > 1:537770‑M2/1‑94 (MQ=255) tCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcgt < 1:2060012‑M2/100‑8 (MQ=255) ccGTTCTTCTTCGTCGTACCTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTACTGAAAGCGAGCTTTTTGACCTctgtcgt < 2:235510‑M2/99‑8 (MQ=255) cGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcgttt < 2:750604‑M2/100‑10 (MQ=255) ttcttcttcGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGACACGACAGaggccaaaaagctcgctttcagcacctgtcgtttc < 2:2469161‑M1/99‑36 (MQ=255) tcttcttcGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcgtttcct > 1:3176314‑M2/1‑88 (MQ=255) cttcttcGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcgtttcctt > 1:1359871‑M2/1‑87 (MQ=255) ttcttcGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTatgtcgtttccttt > 1:2661162‑M2/1‑86 (MQ=255) ttcttcGTCGTAACTTAAGGTATTTATTTAAAATACCCCCGGAAACGAAAGGAAACGACAGaaagcaaaaagctcgctttcagcacctgtcgtttccttt < 2:1153172‑M1/100‑40 (MQ=255) ttcGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGaggccaaaaagctcgctttcagcacctgtcgtttcctttctt < 1:1030767‑M1/100‑43 (MQ=255) gtcgtAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGt > 2:956307/1‑100 (MQ=255) tcgtAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGtt > 1:2976370/1‑100 (MQ=255) gtAACTTATTGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGtttt < 2:142470/100‑1 (MQ=255) gtAACTTAATGTTTTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGaggcccaaaagctcgttttcagcacctgtcgtttcctttcttttcagg < 1:2840057‑M1/100‑49 (MQ=255) gtAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGAGCTGAAAGCGAGCATTATGGCCActgtcgtttcctttcagtgttt < 2:1842691‑M2/99‑23 (MQ=255) tAACTTAATGTTTTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGaggcccaaaagctcgttttcagcacctgtcgtttcctttcttttcaggg < 1:1332685‑M1/100‑50 (MQ=255) aaCTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTg < 1:237593/100‑1 (MQ=255) aaCTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTg < 2:354796/100‑1 (MQ=255) aaCTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTg < 1:2597818/100‑1 (MQ=255) aCTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGt > 2:279467/1‑100 (MQ=255) aaTGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGaggccaaaaagctcgctttcagcacctgtcgtttcctttcttttcagggggtatt < 1:1962578‑M1/100‑56 (MQ=255) aTGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTg < 1:107912/100‑1 (MQ=255) tGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCCGTTTTTGTCCGTgg > 1:2108044/1‑100 (MQ=255) tGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCATTTTGGCAGCAGTAGTTTCCTATCCCTGTTTTTGTCCGTg > 2:474848/1‑99 (MQ=14) gTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGa > 1:2825945/1‑100 (MQ=255) tttatttaAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAAtg < 2:1067773/100‑1 (MQ=255) tatttaAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCTTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAAtgtg < 2:2892707/100‑1 (MQ=255) atttaAAATACCCCCTGAAAAGAAAGGAAACGACAGTTGCTGAAAGCGAGCTCTTTGGCTTCTCTCGTTTCCTTCCTATGTTTCTGTCCGTGGAAggt > 2:3166896/1‑98 (MQ=14) atttaAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGc < 1:699369/100‑1 (MQ=255) atttaAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGc < 2:3715387/100‑1 (MQ=255) atttaAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGc < 2:1668117/100‑1 (MQ=255) taAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAAt > 2:1089534/1‑100 (MQ=255) aaaTACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATgg < 2:3388900/100‑1 (MQ=255) cccccTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTc < 1:1510004/100‑1 (MQ=255) ccccTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTca > 2:1473004/1‑100 (MQ=255) ccTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTcaac < 1:3377469/100‑1 (MQ=255) cTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTcaaca < 1:956312/100‑1 (MQ=255) gAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACaaa > 1:1843632/1‑100 (MQ=255) gAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACaaa > 1:2661060/1‑100 (MQ=255) aaagaaagGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcgtttcctttcttttccgggggtatttaaaatcaataccttaagttaccac < 1:2296676‑M2/98‑56 (MQ=255) aaagaaagGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcgtttccttgcttttcagggggtattttaaataaatacattaagttacgacga < 1:2293668‑M2/100‑58 (MQ=255) aaagaaagGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACaaaaa > 2:1455397/1‑100 (MQ=255) aaagaaagGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACaaaaa < 1:2495332/100‑1 (MQ=255) agaaagGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTATGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAagc > 2:2158132/1‑100 (MQ=255) gaaagGAAACGACAGaggccaaaaagctcgctttcagcacctgtcgtttcctttcttttcagggggtattttaaataaatacattaagttacgacgaaga > 1:472365‑M1/1‑15 (MQ=255) aagGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAagcagc > 1:451784/1‑100 (MQ=255) aagGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAagcagc < 1:630763/100‑1 (MQ=255) aagGAAACGACAGGTGCTGAAAACGAGCTTTTGGGCCTctgtcgtttcctttcttttcagggggtattttaaataaaaacattaagttacgacgaagaag < 1:571344‑M2/100‑63 (MQ=255) agGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcgtttcctttcttttcagggggtattttaaataaatacattaagttactacgaagaaga < 2:898009‑M2/100‑64 (MQ=255) ggAAACGACAGaggccaaaaagctcgctttcagcacctgtcgtttcctttcttttcagggggtattttaaataaatacattaagttacgacgaagaagaa > 2:1337364‑M1/1‑11 (MQ=255) ggAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcgtttcctttcttttcagggggtattttaaatgaatacattaagttacgacgaagaaga < 1:2382668‑M2/99‑64 (MQ=255) ggAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcgtttcctttcttttcagggggtattttaaataaatacattaagttacgacgaagaagaa < 2:970886‑M2/100‑65 (MQ=255) ggAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAgctg > 1:1654503/1‑100 (MQ=255) ggAAACGACAGGTGCTGAAAACGAGCTTTTGGGCCTctgtcgtttcctttcttttcagggggtattttaaataaaaacattaagttacgacgaagaagaa < 1:453987‑M2/100‑65 (MQ=255) ggAAACGACAGGTGCTGAAAACGAGCTTTTGGGCCTctgtcgtttcctttcttttcagggggtattttaaataaaaacattaagttacgacgaagaagaa < 1:3002871‑M2/100‑65 (MQ=255) gAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcgtttcctttcttttcagggggtattttaaataaatacattaagttacgacgaagaagaac < 1:1120208‑M2/100‑66 (MQ=255) aaaCGACAGaggccaaaaagctcgctttcagcatctgtcgtttcctttcttttcagggggtattttaaataaatacattaagttacgacgaagaagaac < 1:1359528‑M1/99‑91 (MQ=255) aaaCGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcgtttcctttcttttcagggggtattttaaataaatacattaagttacgacgaagaagaacg < 1:2750818‑M2/100‑67 (MQ=255) aaaCGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGAAAGTAAAAAAAAAGCAgctggc < 2:32239/100‑1 (MQ=255) aaaCGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATAAAAAAAAAAAAAAAGCAgctggc < 2:1982351/100‑1 (MQ=17) aaCGACAGaggccaaaaagctcgctttcagcacctgtcgtttcctttcttttcagggggtattttaaataaatacattaagttacgacgaagaagaacgg < 1:3617304‑M1/100‑93 (MQ=255) aaCGACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcgtttcctttcttttcagggggtattttaaataaatacattaagttacgacgaagaagaacgg < 1:3469056‑M2/100‑68 (MQ=255) aCGACAGaggccaaaaagctcgctttcagcacctgtcgtttcctttcttttcagggggtattttaaataaatacattaagttacgacgaagaagaacgga > 1:577099‑M1/1‑7 (MQ=255) cGACAGaggccaaaaagctcgctttcagcacctgtcgtttcctttcttttcagggggtattttaaataaatacattaagttacgacgaagaagaacggaa < 1:1291010‑M1/100‑95 (MQ=255) cGACAGaggccaaaaagctcgctttcagcacctgtcgtttcctttcttttcagggggtattttaaataaatacattaagttacgacgaagaagaacggaa < 1:3439164‑M1/100‑95 (MQ=255) cGACAGaggccaaaaagctcgctttcagcacctgtcgtttcctttcttttcaggggggattttaaataaatacattaagttacgacgaagaagaacggaa > 1:2140957‑M1/1‑6 (MQ=255) gACAGGTGCTGAAAGCGAGCTTTTTGGCCTctgtcgtttcctttcttttcagggggtattttaaataaatacattaagttacgacgaagaagaacggaaa < 2:2845824‑M2/100‑71 (MQ=255) aCAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACa < 1:3927168/100‑1 (MQ=255) aCAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACa < 2:1832772/100‑1 (MQ=255) cAGGTGCTGAAAACGAGCTTTTGGGCCTctgtcgtttcctttcttttcagggggtattttaaataaaaacattaagttacgacgaagaagaacggaaatg < 2:3860625‑M2/100‑73 (MQ=255) | CTATTTATGAAAATTTTCCGGTTTAAGGTGTTTCCGTTCTTCTTCGTCGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACAT > NC_000913/580669‑580865 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |