New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2146653NA (NA)10 (0.080) 8/164 NT NA noncoding (54/84 nt) REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2146683 NA (NA)noncoding (84/84 nt) REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 178 total aligned reads displayed.

GTGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGC  >  NC_000913/2146554‑2146752
                                                                                                   |                                                                                                   
ccgatctgtagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAg                                                                                                     <  2:3205845/93‑1 (MQ=255)
  gAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgc                                                                                                   >  2:2945094‑M1/1‑98 (MQ=255)
   aaTAGTAGTTATTTGGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGTGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgcc                                                                                                  <  2:66205‑M1/100‑4 (MQ=255)
   aaTAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgcc                                                                                                  <  1:1169476‑M1/100‑4 (MQ=255)
    aTAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccg                                                                                                 <  1:2307098‑M1/100‑5 (MQ=255)
     tagtagTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccgg                                                                                                <  1:753454‑M1/100‑6 (MQ=255)
       gtagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAgagatcgg                                                                                              >  1:3205867/1‑93 (MQ=255)
       gtagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggat                                                                                              <  2:1805034‑M1/100‑8 (MQ=255)
        tagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATa                                                                                             <  1:1045811/100‑1 (MQ=255)
         agtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATaa                                                                                            >  2:1297816/1‑100 (MQ=255)
           ttATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAgg                                                                                          <  2:3644674/100‑1 (MQ=255)
           ttATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAgg                                                                                          <  1:3249122/100‑1 (MQ=255)
               ttCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCt                                                                                      >  1:167011/1‑100 (MQ=255)
               ttCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCt                                                                                      >  1:2998684/1‑100 (MQ=255)
                tCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGAGACGCTAACGCGTCTTATCATGCCTACCAATCGCTCATTCCCCAGGCCGGATAAGGCGCTc                                                                                     >  2:825980/1‑100 (MQ=255)
                 cgcgATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCg                                                                                    <  2:34437/100‑1 (MQ=255)
                  gcgATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagc                                                                                   >  2:356450‑M1/1‑82 (MQ=255)
                  gcgATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGc                                                                                   >  1:3743840/1‑100 (MQ=255)
                  gcgATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGc                                                                                   <  1:1078512/100‑1 (MQ=255)
                   cgATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCa                                                                                  >  1:293725/1‑100 (MQ=255)
                    gATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCAc                                                                                 <  1:3545816/100‑1 (MQ=255)
                    gATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCAc                                                                                 <  2:3820903/100‑1 (MQ=255)
                      ttAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCg                                                                               >  1:566827/1‑100 (MQ=255)
                      ttAACTGAGGCGGGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCTAGGCCGAATAAGGCGCTCGCACCg                                                                               <  2:3729674/100‑1 (MQ=255)
                        aaCTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCA                                                                             <  1:1462928‑M2/100‑1 (MQ=255)
                        aaCTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCA                                                                             <  2:177110‑M2/100‑1 (MQ=255)
                        aaCTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCA                                                                             <  1:910344‑M2/100‑1 (MQ=255)
                         aCTGACGCGTGCTTCCCCCTCGCCTGATGCGACGCTAACGCATGTCATCATGCCGACCTATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCAcc                                                                                <  2:2101313/96‑1 (MQ=255)
                          cTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATC                                                                           >  2:743038‑M2/1‑100 (MQ=255)
                             aGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGTCGGATAAGGCGCTCGCACCGCATCCGG                                                                        >  2:2089591‑M2/1‑100 (MQ=255)
                             aGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGG                                                                        >  1:3809197‑M2/1‑100 (MQ=255)
                             aGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGG                                                                        >  1:644714‑M2/1‑100 (MQ=255)
                               gCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcc                                                                      <  1:356450‑M1/100‑32 (MQ=255)
                               gCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCg                                                                      <  1:1269891/100‑1 (MQ=255)
                                cGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcct                                                                     <  1:3492735‑M1/100‑33 (MQ=255)
                                cGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcct                                                                     <  2:1681719‑M1/100‑33 (MQ=255)
                                  cgCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGAcc                                                                   <  1:1764467/99‑1 (MQ=255)
                                   gCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCTGGCGAcc                                                                   <  1:2876280/99‑1 (MQ=255)
                                    cTTCCCGATCGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAACTCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcctgggg                                                                 <  2:611560‑M1/100‑37 (MQ=255)
                                    cTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATACGGCGCTCGCACCGCATCCGGCGACCaa                                                                 >  2:337785/1‑100 (MQ=255)
                                     ttCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcctgggga                                                                <  1:400388‑M1/100‑38 (MQ=255)
                                      tCCCCATGGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACg                                                               >  1:2078980/1‑100 (MQ=255)
                                      tCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACg                                                               >  1:2224561/1‑100 (MQ=255)
                                        cccATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTc                                                             >  1:3072053/1‑100 (MQ=255)
                                         ccATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCa                                                            >  1:1896041/1‑100 (MQ=255)
                                          naTCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGGTAAGGCGCTCGCACCGCATCCGGCGACCAACGTCAt                                                           >  1:1386644/2‑100 (MQ=255)
                                          cATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCAt                                                           >  1:2635019/1‑100 (MQ=255)
                                             cGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCt                                                        <  2:3599429/100‑1 (MQ=255)
                                             cGCCGGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGc                                                         <  2:1655267/99‑1 (MQ=255)
                                                  gATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTc                                                   >  1:3095633/1‑100 (MQ=255)
                                                   aTGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCt                                                  <  1:3409883/100‑1 (MQ=255)
                                                   aTGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCt                                                  <  1:3753600/100‑1 (MQ=255)
                                                   aTGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATCCTTCGTCt                                                  >  1:3320482/1‑100 (MQ=255)
                                                    tGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTg                                                 >  1:3346787/1‑100 (MQ=255)
                                                    tGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTg                                                 >  2:2800540/1‑100 (MQ=255)
                                                     gCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTgg                                                <  1:1649738/100‑1 (MQ=255)
                                                      cGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGt                                               <  2:1752497/100‑1 (MQ=255)
                                                      cGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCAGCCGGCGACCAACGTCATGCTTCGTCTGGt                                               >  2:2375409/1‑100 (MQ=255)
                                                        aagCTAACACGTCCGATCATGCCTACAAATCGCTCACTCCCCAGGCCGCATAACCCGCTCACACCGCATCCGGCGACCAACGTCATGCTGCGTCTGGt                                               <  2:324394/96‑1 (MQ=255)
                                                        aCGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGTTTg                                             <  1:1974921/100‑1 (MQ=255)
                                                         cGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCCCCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGc                                            >  2:1188467/1‑100 (MQ=255)
                                                         cGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGc                                            >  2:1900308/1‑100 (MQ=255)
                                                             aaCGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGc                                        <  1:3151464/100‑1 (MQ=255)
                                                                   tCTTATCATGCCTACAAATCGCTCATTCCGCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACAAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCg                                  <  2:2365590/100‑1 (MQ=255)
                                                                   tCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCg                                  >  1:1869023/1‑100 (MQ=255)
                                                                      tATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGtat                               >  1:3420001/1‑100 (MQ=255)
                                                                       aTCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGtata                              >  1:293160/1‑100 (MQ=255)
                                                                         cATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATAcc                            >  2:2077137/1‑100 (MQ=255)
                                                                         cATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATAcc                            >  1:3302905/1‑100 (MQ=255)
                                                                           tGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAg                          >  1:3452850/1‑100 (MQ=255)
                                                                           tGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAg                          <  1:2603888/100‑1 (MQ=255)
                                                                            gCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTTATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGa                         <  1:2775802/100‑1 (MQ=255)
                                                                            gCCTACAAATCGCCCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCa                           <  2:1646327/98‑1 (MQ=255)
                                                                             ccTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                        >  2:2129664/1‑100 (MQ=255)
                                                                             ccTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                        <  1:754068/100‑1 (MQ=255)
                                                                             ccTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                        >  1:3290395/1‑100 (MQ=255)
                                                                             ccTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                        <  2:3176600/100‑1 (MQ=255)
                                                                               tACAAATCGCTCATTTCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGatat                      >  1:2628361/1‑100 (MQ=255)
                                                                                 cAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATg                     <  2:1006184/99‑1 (MQ=255)
                                                                                   aaTCGCTCATTCCCAAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGc                    <  2:3290373/98‑1 (MQ=255)
                                                                                    aTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAAc                 >  2:2546822/1‑100 (MQ=255)
                                                                                      cGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAg               <  1:1130001/100‑1 (MQ=255)
                                                                                       gCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgc              >  1:3064296/1‑100 (MQ=255)
                                                                                       gCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgc              <  2:1525681/100‑1 (MQ=255)
                                                                                        cTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgcg             <  2:293725/100‑1 (MQ=255)
                                                                                        cTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgcg             >  1:2693148/1‑100 (MQ=255)
                                                                                          cATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTACCAGCCTTCCGTATACCAGATATGCAACAGCGCa           >  2:1080019/1‑100 (MQ=255)
                                                                                           aTTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCAt          >  1:2215930/1‑100 (MQ=255)
                                                                                            ttCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATa         <  2:3622853/100‑1 (MQ=255)
                                                                                             tCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaa        <  1:400388‑M2/100‑64 (MQ=255)
                                                                                              ccccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAg       <  2:2272380/100‑1 (MQ=255)
                                                                                               cccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagc      <  1:2162652‑M2/100‑66 (MQ=255)
                                                                                               cccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGa      <  2:604151/100‑1 (MQ=255)
                                                                                               cccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCACAAGa      >  2:1995055/1‑100 (MQ=255)
                                                                                                ccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagca     <  1:1593455‑M2/100‑67 (MQ=255)
                                                                                                  aGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacg   <  1:1387040‑M2/100‑69 (MQ=255)
                                                                                                   ggCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacgc  <  1:356450‑M2/100‑70 (MQ=255)
                                                                                                   ggCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAAccc  >  1:1282776/1‑98 (MQ=255)
                                                                                                   ggCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGc  >  2:138991/1‑100 (MQ=255)
                                                                                                   ggCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGc  >  2:1807126/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GTGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGC  >  NC_000913/2146554‑2146752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.