New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2568139 =NA (NA)9 (0.070) 5/164 NT NA noncoding (1/183 nt) REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 2568169 = NA (NA)noncoding (31/183 nt) REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 204 total aligned reads displayed.

ATCCTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACT  >  NC_000913/2568040‑2568238
                                                                                                   |                                                                                                   
aTCCTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTg                                                                                                     >  1:3188838/1‑100 (MQ=255)
  ccTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGc                                                                                                   <  1:711073/100‑1 (MQ=255)
  ccTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGc                                                                                                   >  2:2844871/1‑100 (MQ=255)
   cTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCg                                                                                                  >  1:3642406/1‑100 (MQ=255)
    tGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCgg                                                                                                 >  1:3134936/1‑100 (MQ=255)
     gTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGa                                                                                                <  1:2790328/100‑1 (MQ=255)
      tCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGAt                                                                                               <  1:1010098/100‑1 (MQ=255)
       cTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATg                                                                                              >  2:2056961/1‑100 (MQ=255)
            gCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgcggcg                                                                                         <  1:3076788/100‑1 (MQ=255)
              aGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTa                                                                                       <  2:1652153/100‑1 (MQ=255)
              aGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTa                                                                                       <  2:225276/100‑1 (MQ=255)
               gCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTaa                                                                                      <  2:2874277/100‑1 (MQ=255)
               gCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTaa                                                                                      >  1:1351059/1‑100 (MQ=255)
                 tATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCAGCGCCTTTACTCCATGTTAGTTGTTATTTAGTGATGGATGCGGCGTaagc                                                                                    >  1:1737976/1‑98 (MQ=255)
                  aTCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACg                                                                                   <  1:1170381/100‑1 (MQ=255)
                    cAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGcc                                                                                 >  2:3000318/1‑100 (MQ=255)
                    cAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGc                                                                                  >  2:1451055/1‑99 (MQ=255)
                     aGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTaagatcgg                                                                                >  2:3193538/1‑94 (MQ=255)
                      gCATAAAGGACCTCATTATGTACATTATGGTTTCGTTTATTCCCAGCGCCTTTACGCCCTGTTAGTTGTCATTTATTGGCGAATGCGGCGTAAACGcc                                                                                 <  2:3432866/98‑1 (MQ=255)
                       cATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTa                                                                              >  1:863554/1‑100 (MQ=255)
                       cATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTa                                                                              >  2:2745548/1‑100 (MQ=255)
                        aTAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTAt                                                                             >  1:1545463/1‑100 (MQ=255)
                        aTAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTAt                                                                             >  1:3436860/1‑100 (MQ=255)
                         tAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATc                                                                            >  2:3905507/1‑100 (MQ=255)
                         cgccagttgcgcggtgcgattgccggatgcgatgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATc                                                                            >  1:1724197‑M1/75‑100 (MQ=255)
                          gccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATc                                                                            >  2:2082072‑M1/74‑99 (MQ=255)
                          aaaGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATcc                                                                           >  1:2946440/1‑100 (MQ=255)
                          aaaGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATcc                                                                           <  1:1902931/100‑1 (MQ=255)
                          aaaGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATcc                                                                           <  1:327575/100‑1 (MQ=255)
                           aaGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCg                                                                          >  1:595771/1‑100 (MQ=255)
                            cagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCGc                                                                         >  1:1141880‑M1/72‑100 (MQ=255)
                             gAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCg                                                                          <  1:1482384/98‑1 (MQ=255)
                             gAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGcc                                                                        <  1:2966514/100‑1 (MQ=255)
                              aaCATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGccc                                                                       >  2:131865/1‑100 (MQ=255)
                               aCATCATGATGTACATGATGATTTCGTTAATTCGCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCt                                                                      <  2:3525184/100‑1 (MQ=255)
                               aCATCATGATGTACATGATGATTTCGTTAATTCCCATAGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCt                                                                      >  2:2944007/1‑100 (MQ=255)
                                catcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTCTCCGCCCTa                                                                     >  2:3046565/1‑100 (MQ=255)
                                catcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTa                                                                     <  1:555454/100‑1 (MQ=255)
                                catcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTa                                                                     >  2:2900869/1‑100 (MQ=255)
                                catcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATAAGGCGTTTACGCCGCATCCGccaat                                                                     <  2:2695354/100‑4 (MQ=25)
                                catcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTCGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTa                                                                     >  1:209639/1‑100 (MQ=255)
                                       atgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGc                                                              <  1:2547740/100‑1 (MQ=255)
                                       atgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGc                                                              >  1:692531/1‑100 (MQ=255)
                                        tgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGc                                                              <  1:787922/99‑1 (MQ=255)
                                        tgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCa                                                             >  2:3704225/1‑100 (MQ=255)
                                        tgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCa                                                             >  2:2566681/1‑100 (MQ=255)
                                        tgTACATGATGATTTCGTTAATTCCCAGCGCCTTTACTCCCTGTTATTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCa                                                             <  2:2485301/100‑1 (MQ=255)
                                        gcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGc                                                              >  2:3223875‑M1/60‑99 (MQ=255)
                                          tACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAt                                                           <  1:2924424/100‑1 (MQ=255)
                                          tACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAt                                                           <  2:110117/100‑1 (MQ=255)
                                           aCATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATc                                                          <  1:974318/100‑1 (MQ=255)
                                            cATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATcc                                                         >  2:2631546/1‑100 (MQ=255)
                                            cATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATcc                                                         <  1:580382/100‑1 (MQ=255)
                                              tgatgaTTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCg                                                       >  2:2521982/1‑100 (MQ=255)
                                               gatgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCACTccc                                                        >  2:2283809/1‑98 (MQ=255)
                                                 tgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAg                                                    >  1:407807/1‑100 (MQ=255)
                                                  gatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAgg                                                   <  2:2890997/100‑1 (MQ=255)
                                                   atTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGc                                                  <  1:2751185/100‑1 (MQ=255)
                                                    tttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCt                                                 <  1:1445047/100‑1 (MQ=255)
                                                     ttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTg                                                >  2:91706/1‑100 (MQ=255)
                                                     ttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATACGCCCTACATGTGCAATCCCGTAGGc                                                  >  2:1832481/1‑98 (MQ=255)
                                                       cGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGa                                              >  2:1806795/1‑100 (MQ=255)
                                                       cGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGa                                              >  2:807312/1‑100 (MQ=255)
                                                        gTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGAt                                             >  2:2331274/1‑100 (MQ=255)
                                                         ttAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGaga                                            >  1:2033756/1‑98 (MQ=255)
                                                         ttAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATa                                            >  1:516570/1‑100 (MQ=255)
                                                           aaTTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAg                                          <  2:407807/100‑1 (MQ=255)
                                                           aaTTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAg                                          <  1:2493507/100‑1 (MQ=255)
                                                            aTTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGa                                         >  2:3657738/1‑100 (MQ=255)
                                                               cccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGCTAAGActc                                      >  2:498403/1‑98 (MQ=255)
                                                               cccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAcgc                                      >  2:763905/1‑100 (MQ=255)
                                                                ccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAcgcg                                     <  2:869515/100‑1 (MQ=255)
                                                                  aTCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGCATAAGACGCGGc                                   <  1:2592777/100‑1 (MQ=255)
                                                                   tCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCa                                  <  1:1558662/100‑1 (MQ=255)
                                                                     gCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAg                                <  1:1219151/100‑1 (MQ=255)
                                                                      ccTTTATTCCCTGTTAGTTTTTATTTATTGGAGGATGCGGCGTAACCGCCTTATCCGCCCTACATGTCCAATCCCGTAGGCTGGATAAGAcgcg                                     <  2:3139900/94‑1 (MQ=18)
                                                                      ccTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGc                               >  1:1441465/1‑100 (MQ=255)
                                                                       cTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCg                              <  2:2034083/100‑1 (MQ=255)
                                                                       cTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCg                              >  2:1035384/1‑100 (MQ=255)
                                                                        tttACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGca                              <  1:2307179/99‑2 (MQ=255)
                                                                          tACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCg                           <  1:3404463/100‑1 (MQ=255)
                                                                           aCTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCg                           >  2:1485360/1‑99 (MQ=255)
                                                                            cTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCa                         <  1:3640887/100‑1 (MQ=255)
                                                                                 tGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCgg                    >  2:3236810/1‑100 (MQ=255)
                                                                                 tGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCgg                    >  1:1684672/1‑100 (MQ=255)
                                                                                  gTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGc                   <  1:2671308/100‑1 (MQ=255)
                                                                                   ttAGTTGTTATTTATTGCCAGATGCGCCGTAAACGCCTTATCCGCCCCACATGTGCAATCCCGTAGACTGGATAAGACGCGGCAAGCGTCGCATCCGGc                   <  2:2350405/99‑1 (MQ=17)
                                                                                     aGTTGTTATTTATTGGCGGATGTGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAAt                <  1:2352765/100‑1 (MQ=255)
                                                                                     aGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAAt                <  1:3243558/100‑1 (MQ=255)
                                                                                       ttgttATTTATTGGAGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTg              <  2:3399502/100‑1 (MQ=255)
                                                                                         gttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCa            >  1:3018877/1‑100 (MQ=255)
                                                                                           tatttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCAcc          <  1:1881963/100‑1 (MQ=255)
                                                                                            atttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACcg         >  1:1951983/1‑100 (MQ=255)
                                                                                            atttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACcg         >  2:1965787/1‑100 (MQ=255)
                                                                                             tttattGGCGGATGCGGCGTAAACGCCTTATCCGCCATACATGTGAAATCACGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCATTTGCACcgc        >  2:966231/1‑100 (MQ=17)
                                                                                               tattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCgcgc      >  1:2162641/1‑100 (MQ=255)
                                                                                                  tGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCAc   >  1:3371397/1‑100 (MQ=255)
                                                                                                   GGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACt  >  2:247258‑M1/1‑100 (MQ=255)
                                                                                                   GGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACt  <  1:3482224‑M1/100‑1 (MQ=255)
                                                                                                   GGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACt  <  1:419538‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ATCCTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACT  >  NC_000913/2568040‑2568238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.