New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2794028 =NA (NA)12 (0.090) 7/166 NT NA noncoding (1/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 2794059 = NA (NA)noncoding (32/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 240 total aligned reads displayed.

ATCCTTGTACCGCTCACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAAT  >  NC_000913/2793929‑2794127
                                                                                                   |                                                                                                   
gagcggctccgccttacccggccaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagg                                                                                                     <  2:3728527‑M1/1‑1 (MQ=255)
 tCCTTGTACCGCTCACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGc                                                                                                    >  1:632214/1‑100 (MQ=255)
 agcggctccgccttacccggccaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGc                                                                                                    >  1:3931211‑M1/99‑100 (MQ=255)
 agcggctccgccttacccggccaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGc                                                                                                    <  2:1232223‑M1/2‑1 (MQ=255)
  gcggctccgccttacccggccaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGcc                                                                                                   >  2:943370‑M1/98‑100 (MQ=255)
  gcggctccgccttacccggccaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGcc                                                                                                   <  2:1543774‑M1/3‑1 (MQ=255)
  gcggctccgccttacccggccaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGcc                                                                                                   >  1:1632331‑M1/98‑100 (MQ=255)
   cggctccgccttacccggccaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttgtccgacctggatccccgtagGCCg                                                                                                  >  2:3618875‑M1/97‑100 (MQ=255)
   cTTGTACCGCTCACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCg                                                                                                  <  2:1590475/100‑1 (MQ=255)
    ggctccgccttacccggccaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctgggtccccgtagGCCgg                                                                                                 <  2:2685354‑M1/5‑1 (MQ=255)
    ggctccgccttacccggcaaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCgg                                                                                                 >  2:1724409‑M1/96‑100 (MQ=255)
      gTACCGCTCACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAg                                                                                               <  1:27384/100‑1 (MQ=255)
      gTACCGCTCACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAg                                                                                               <  1:2171661/100‑1 (MQ=255)
       tACCGCTCACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAgg                                                                                              <  1:2909920/100‑1 (MQ=255)
       tACCGCTCACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAgg                                                                                              >  2:1135238/1‑100 (MQ=255)
         ccGCTCACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCg                                                                                            >  2:1040352/1‑100 (MQ=255)
         ccGCTCACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCg                                                                                            >  1:755559/1‑100 (MQ=255)
           gCTCACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGAc                                                                                          >  2:659497/1‑100 (MQ=255)
              cACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCAGCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCt                                                                                       <  2:1945672/100‑1 (MQ=255)
                ccATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTgc                                                                                     >  1:809904/1‑100 (MQ=255)
                ccATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTgc                                                                                     >  2:2387058/1‑100 (MQ=255)
                  aTTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTgcgc                                                                                   >  1:3546290/1‑100 (MQ=255)
                   ttGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGcgcg                                                                                  <  1:1040358/100‑1 (MQ=255)
                   ttGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGcgcg                                                                                  <  2:310436/100‑1 (MQ=255)
                     gAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTc                                                                                >  1:2829761/1‑100 (MQ=255)
                     gAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTc                                                                                <  1:1859598/100‑1 (MQ=255)
                     gAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTc                                                                                <  2:3299245/100‑1 (MQ=255)
                     gAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTc                                                                                <  1:3302855/100‑1 (MQ=255)
                      aaGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCt                                                                               <  1:968172/100‑1 (MQ=255)
                      aaGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCt                                                                               <  2:1818732/100‑1 (MQ=255)
                          cGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTc                                                                           >  1:3602996/1‑100 (MQ=255)
                          cGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTc                                                                           <  2:2736339/100‑1 (MQ=255)
                          cGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTc                                                                           >  1:1665919/1‑100 (MQ=255)
                          cGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTc                                                                           >  2:871477/1‑100 (MQ=255)
                          atagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGACAAGACGCTGCGCGTCTTGTc                                                                           >  1:1437959‑M1/74‑100 (MQ=255)
                            cTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCg                                                                         >  1:2290733/1‑100 (MQ=255)
                              atttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGc                                                                       >  2:2516062‑M1/70‑100 (MQ=255)
                               aGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGcc                                                                      <  2:2104156/100‑1 (MQ=255)
                                  tCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTAc                                                                   >  2:3052193/1‑100 (MQ=255)
                                  tCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTAc                                                                   >  1:2537315/1‑100 (MQ=255)
                                    tcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACgg                                                                 >  1:1386211‑M1/64‑100 (MQ=255)
                                         gggTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATc                                                            <  2:3496808/100‑1 (MQ=255)
                                         gggTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATc                                                            <  2:1599244/100‑1 (MQ=255)
                                         gggTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATc                                                            <  1:1024487/100‑1 (MQ=255)
                                          ggTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATcc                                                           <  1:1295796/100‑1 (MQ=255)
                                           gTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCa                                                          <  1:170176/100‑1 (MQ=255)
                                              tGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGt                                                       >  2:2671034/1‑100 (MQ=255)
                                               ggAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTc                                                      >  2:3458872/1‑100 (MQ=255)
                                                 agaTCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCgg                                                    <  2:779855/100‑1 (MQ=255)
                                                   atcatcAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGAt                                                  <  2:3599923/100‑1 (MQ=255)
                                                   atcatcAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGAt                                                  <  1:2113333/100‑1 (MQ=255)
                                                   atcatcAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGAt                                                  <  2:283623/100‑1 (MQ=255)
                                                    tcatcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATa                                                 >  2:1735873/1‑100 (MQ=255)
                                                    tcatcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATa                                                 >  1:3237899/1‑100 (MQ=255)
                                                    tcatcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATa                                                 >  1:3377641/1‑100 (MQ=255)
                                                    tcatcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATa                                                 <  1:3788207/100‑1 (MQ=255)
                                                      atcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAg                                               >  2:531517/1‑100 (MQ=255)
                                                       tcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAgg                                              <  2:2048300/100‑1 (MQ=255)
                                                          gCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGGTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGt                                           >  2:1959396/1‑100 (MQ=255)
                                                           ccAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGtt                                          >  2:2577288/1‑100 (MQ=255)
                                                           ccAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGtt                                          >  2:2933174/1‑100 (MQ=255)
                                                             aGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTa                                        <  2:1221025/100‑1 (MQ=255)
                                                              gtgtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAc                                       >  1:3010669/1‑100 (MQ=255)
                                                                gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATGAGGCGTTTAcgc                                     <  1:2590530/100‑1 (MQ=255)
                                                                gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgc                                     <  1:1229024/100‑1 (MQ=255)
                                                                gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgc                                     >  1:737023/1‑100 (MQ=255)
                                                                gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgc                                     <  2:2537298/100‑1 (MQ=255)
                                                                gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgc                                     >  1:1656974/1‑100 (MQ=255)
                                                                gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgc                                     >  2:155042/1‑100 (MQ=255)
                                                                  tttGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgccg                                   <  1:929534/100‑1 (MQ=255)
                                                                     gatgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCAt                                >  2:2617161/1‑100 (MQ=255)
                                                                      atgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATc                               >  1:3641507/1‑100 (MQ=255)
                                                                       tgaGGCGAAGTAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAAGCCGCATcc                              >  1:1276975/1‑100 (MQ=255)
                                                                        gaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCg                             >  1:1933844/1‑100 (MQ=255)
                                                                        gaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCg                             >  1:568971/1‑100 (MQ=255)
                                                                         aGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGa                            <  1:1240379/100‑1 (MQ=255)
                                                                          ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATGCGGCGTAAACGCCTTATCCGAc                           <  2:3828650/100‑1 (MQ=37)
                                                                          ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                           <  2:142964/100‑1 (MQ=255)
                                                                          ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                           >  1:3728555/1‑100 (MQ=255)
                                                                          ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                           <  1:2377801/100‑1 (MQ=255)
                                                                          ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTCACGCCGCATCCGAc                           >  1:382599/1‑100 (MQ=255)
                                                                              aaGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATc                       <  2:2924425/100‑1 (MQ=255)
                                                                                 cAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGt                    <  1:861250/100‑1 (MQ=255)
                                                                                 cAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGt                    >  2:3017028/1‑100 (MQ=255)
                                                                                  aGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGTGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTa                   <  2:3154408/100‑1 (MQ=255)
                                                                                  aGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTa                   <  1:2012832/100‑1 (MQ=255)
                                                                                   gTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTAc                  >  2:2211898/1‑100 (MQ=255)
                                                                                    tAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACg                 <  1:524635/100‑1 (MQ=255)
                                                                                    tAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACg                 <  2:1084632/100‑1 (MQ=255)
                                                                                     aGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGt                <  2:3139189/100‑1 (MQ=255)
                                                                                        gtcgcTCGTATGGCGAAGGCGAAGATAAGGGTCTTGCCCCGCCTACGGCGGTCCAGGTAAGACAAGGCGTTTACGCCTCATCTAACAATCTGTACGTg               <  2:1467044/96‑1 (MQ=255)
                                                                                        gccgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGaa             <  2:580235/100‑1 (MQ=255)
                                                                                         ccgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGAGAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGaa             <  2:1355573/99‑1 (MQ=255)
                                                                                          cgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACa           <  2:1405180/100‑1 (MQ=255)
                                                                                          cgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACa           <  1:1450295/100‑1 (MQ=255)
                                                                                              ccTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaa       >  2:440079/1‑100 (MQ=255)
                                                                                               cTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaag      >  2:3779009/1‑100 (MQ=255)
                                                                                               cTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaag      <  1:132431/100‑1 (MQ=255)
                                                                                                tATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaaga     >  2:2020437/1‑100 (MQ=255)
                                                                                                   GCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACTCCGCATCCGACAATCTGTACGTGAACAGGAAGAAAt  >  1:3129692‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ATCCTTGTACCGCTCACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAAT  >  NC_000913/2793929‑2794127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.