New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 837541 =NA (NA)5 (0.040) 4/166 NT NA noncoding (3/123 nt) REP77 (repetitive extragenic palindromic) element; contains 3 REP sequences REP77 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 837571 = NA (NA)noncoding (33/123 nt) REP77 (repetitive extragenic palindromic) element; contains 3 REP sequences REP77 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 176 total aligned reads displayed.

GGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACT  >  NC_000913/837472‑837669
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ggTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCaa                                                                                                    >  1:3331137/1‑100 (MQ=255)
 gTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAAc                                                                                                   >  2:1895477/1‑100 (MQ=255)
 ccgcatccggcaacagatgcctgatgcgacgctaccgcgtcttatcaggcctacaaaatccgaaccgtTGGACGTAGCGTAAACGCCTGATCCGTCCAAc                                                                                                   >  2:1626432‑M1/69‑100 (MQ=255)
  tAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACg                                                                                                  <  2:3195160/100‑1 (MQ=255)
   gcatccggcaacagatgcctgatgcgacgctaccgcgtcttatcaggcctacaaaatccgaaccgtTGGACGTAGCGTAAACGCCTGATCCGTCCAACgg                                                                                                 >  1:230261‑M1/67‑100 (MQ=255)
   aaCATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACgg                                                                                                 <  1:3171532/100‑1 (MQ=255)
    aCATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGGAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAAc                                                                                                   <  1:2293927/97‑1 (MQ=255)
     cATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGtt                                                                                               >  1:1996586/1‑100 (MQ=255)
     cATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGtt                                                                                               >  2:249289/1‑100 (MQ=255)
      aTAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTc                                                                                              >  1:2275004/1‑100 (MQ=255)
       tAGGATCAATGAGGGTTAGAGCATATGCGTCTTTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCg                                                                                             <  1:3929882/100‑1 (MQ=255)
       tAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCg                                                                                             <  1:779222/100‑1 (MQ=255)
        aGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCgg                                                                                            <  1:1732569/100‑1 (MQ=255)
        aGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCgg                                                                                            <  1:233812/100‑1 (MQ=255)
        aGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCgg                                                                                            <  2:3761040/100‑1 (MQ=255)
         ggATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGa                                                                                           >  1:3702015/1‑100 (MQ=255)
         ggATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGa                                                                                           >  1:3010419/1‑100 (MQ=255)
         ggATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGa                                                                                           >  1:534128/1‑100 (MQ=255)
         ggATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGa                                                                                           >  2:3437862/1‑100 (MQ=255)
          gATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCgg                                                                                            >  2:3105294/1‑98 (MQ=255)
            tCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGAttt                                                                                        >  2:1725275/1‑100 (MQ=255)
              aaTGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTg                                                                                      >  1:2644012/1‑100 (MQ=255)
               aTGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGt                                                                                     <  1:942464/100‑1 (MQ=255)
               aTGAGGCGTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTg                                                                                      <  1:3766188/99‑1 (MQ=255)
                tGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTa                                                                                    <  1:3860247/100‑1 (MQ=255)
                gatgcctgatgcgacgctaccgcgtcttatcaggcctacaaaatccgaaccgtTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTa                                                                                    >  1:253808‑M1/54‑100 (MQ=255)
                 tggggTTAGAGCGTATGGTTCGTTCGGCAAACAGGCAGGGAAATTCTTGTGCTGGACGTAGCGTAAACGCCTGATGCGTCCAACGGTTCGGATTTTGTa                                                                                    <  2:3129044/97‑1 (MQ=255)
                   gggTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAgg                                                                                  <  2:605100/99‑1 (MQ=255)
                    gtttAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGcc                                                                                >  1:2675417/3‑100 (MQ=255)
                      ttAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTg                                                                              <  1:318364/100‑1 (MQ=255)
                      ttAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTg                                                                              <  2:554455/100‑1 (MQ=255)
                      ttAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTg                                                                              <  2:3949440/100‑1 (MQ=255)
                       tAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGa                                                                             <  1:3101012/100‑1 (MQ=255)
                        agagCATATGCGTCTGGCGGCAAACAGACAGGGAAATACTTGTGCTGGGCGTAGCGTAAACGCCTGATCGGTCCAACGGTTCGGATTTTGTAGGCCTg                                                                              <  2:1368316/98‑1 (MQ=255)
                         gagCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATa                                                                           >  1:2122316/1‑100 (MQ=255)
                          agCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGTCCTGATaa                                                                          >  2:609529/1‑100 (MQ=255)
                           gCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAg                                                                         >  1:3545507/1‑100 (MQ=255)
                            cATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGa                                                                        >  1:2756461/1‑100 (MQ=255)
                             atatGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGa                                                                        >  2:1764505/1‑99 (MQ=255)
                                tGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGAcgcg                                                                    <  2:2212888/100‑1 (MQ=255)
                                    tCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAg                                                                <  1:3034973/100‑1 (MQ=255)
                                     cTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGc                                                               >  2:44883/1‑100 (MQ=255)
                                     cTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGc                                                               >  2:3325950/1‑100 (MQ=255)
                                      tGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCg                                                              >  1:286140/1‑100 (MQ=255)
                                        tCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTc                                                            <  1:1460258/100‑1 (MQ=255)
                                         cGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCg                                                           >  1:261414/1‑100 (MQ=255)
                                          ggCAAACAGACAGGGAAATACTTGTGCTGGACGTGGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCg                                                              >  2:794994/1‑96 (MQ=255)
                                          ggCAAACAGACAGGGAAATACATGTGCTGGACCTTCCGCAAACGCCTGATCCGTCCAACGGTTCGGCTTTTGCTGGCCTGATACGACGCGGAAGCGTc                                                            >  2:1840662/1‑98 (MQ=255)
                                           gCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCa                                                         <  2:2568625/100‑1 (MQ=255)
                                           gCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCa                                                         <  1:1658380/100‑1 (MQ=255)
                                           gCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCa                                                         <  1:222329/100‑1 (MQ=255)
                                             aaaCAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATc                                                       >  2:881339/1‑100 (MQ=255)
                                               tccgatctggAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAg                                                     <  2:3939477/92‑1 (MQ=255)
                                                cagacagGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAgg                                                    >  1:1191636/1‑100 (MQ=255)
                                                cagacagGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAgg                                                    <  2:2236090/100‑1 (MQ=255)
                                                 agacagGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGGCTGATAAGACGCGGTAGCGTCGCATCAGGc                                                   >  1:3697786/1‑100 (MQ=255)
                                                 agacagGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGc                                                   <  1:2583180/100‑1 (MQ=255)
                                                  gacagGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCa                                                  >  2:1247628/1‑100 (MQ=255)
                                                   tctgggAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCAt                                                 <  2:2820135/97‑1 (MQ=255)
                                                   acagGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCAt                                                 >  2:1328959/1‑100 (MQ=255)
                                                    cagGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATc                                                >  1:1365662/1‑100 (MQ=255)
                                                      gggAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCAtaga                                              >  1:2820153/1‑97 (MQ=255)
                                                       ggAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAgagatcgga                                             >  1:3939507/1‑92 (MQ=255)
                                                            tatttGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCg                                        <  2:1061314/97‑1 (MQ=255)
                                                            tACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCg                                        <  2:3545481/100‑1 (MQ=255)
                                                            tACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCg                                        <  1:1125758/100‑1 (MQ=255)
                                                             aCTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCgg                                       <  1:2912681/100‑1 (MQ=255)
                                                                tgtgCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATg                                    >  1:1412544/1‑100 (MQ=255)
                                                                  cgttggacggatcaggcgtttacgctacgtccaACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATgcg                                  >  1:783732‑M2/34‑100 (MQ=255)
                                                                   gttggacggatcaggcgtttacgctacgtccaACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATgcgg                                 >  1:200361‑M2/33‑100 (MQ=255)
                                                                   gCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATgcgg                                 >  2:2304919/1‑100 (MQ=255)
                                                                   gCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATgcgg                                 <  2:2643995/100‑1 (MQ=255)
                                                                    cTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATgcggc                                <  1:1953988/100‑1 (MQ=255)
                                                                     TGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATgcggcg                               >  1:249289‑M1/1‑100 (MQ=255)
                                                                        ACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTaa                            >  1:671843‑M1/1‑100 (MQ=255)
                                                                           tAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGTCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACg                         >  2:2948958/1‑100 (MQ=255)
                                                                            aGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTaaa                           >  2:2263318/1‑97 (MQ=255)
                                                                             gCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGcc                       <  2:1599594/100‑1 (MQ=255)
                                                                              cGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCt                      >  2:3730056/1‑100 (MQ=255)
                                                                              cGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCt                      >  1:663843/1‑100 (MQ=255)
                                                                              cGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCt                      <  1:1284561/100‑1 (MQ=255)
                                                                              cGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCt                      <  1:2476889/100‑1 (MQ=255)
                                                                              cGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCt                      >  1:572278/1‑100 (MQ=255)
                                                                              cGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAACGTCGCATCAGGCATCTCTTGCCCGATGCGGCGGAAAAGcc                       >  2:3636277/1‑99 (MQ=25)
                                                                                tAAACGCCTGATCCTTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCt                      <  1:3554819/98‑1 (MQ=255)
                                                                                tAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTa                    >  2:989430/1‑100 (MQ=255)
                                                                                 aaaCGCCTGCTCCGTCCAACGGTTCGGATTCTGTAGGCCTTATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTa                    <  1:2528927/99‑1 (MQ=255)
                                                                                  aaCGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATc                  <  1:1091035/100‑1 (MQ=255)
                                                                                  aaCGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATc                  <  2:1126293/100‑1 (MQ=255)
                                                                                      ccTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTc              >  2:3408480/1‑100 (MQ=255)
                                                                                      ccTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTc              >  2:1954293/1‑100 (MQ=255)
                                                                                       cTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTcc             <  1:3408503/100‑1 (MQ=255)
                                                                                        tGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCt            >  1:1595223/1‑100 (MQ=255)
                                                                                          aTCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTTGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTAc          >  2:1237151/1‑100 (MQ=255)
                                                                                          aTCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGGGGCGTAAACGCCTTATCCGCCCTa           >  1:3112384/1‑99 (MQ=255)
                                                                                             cgtccaCCGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCAACTGTTGCCGGATGCGGTGTAAACGCCCTATCCGTCCTACGaa       >  2:2617686‑M2/7‑100 (MQ=255)
                                                                                             cgtccaACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGaa       >  1:558894‑M2/7‑100 (MQ=255)
                                                                                              gtccaACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAAt      >  2:3688312‑M2/6‑100 (MQ=255)
                                                                                               tccaACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAAtt     >  1:750498‑M2/5‑100 (MQ=255)
                                                                                                ccaACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCCCATCAGGCATCTGTTGCCGGATGCGGCGTAAACCCcttatccgtcccaacaaata    >  2:3739278‑M2/4‑91 (MQ=255)
                                                                                                   |                                                                                                  
GGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATTACT  >  NC_000913/837472‑837669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.