New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2236534 =NA (NA)8 (0.060) 5/164 NT NA noncoding (1/150 nt) REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 2236564 = NA (NA)noncoding (31/150 nt) REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 158 total aligned reads displayed.

AAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGT  >  NC_000913/2236465‑2236663
                                                                                                   |                                                                                                   
ggatgcaacgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGCCGGATGCGGCTTGAACGCCTTATCCGGcc                                                                                                     >  1:889750‑M1/70‑100 (MQ=255)
 aGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt                                                                                                    >  1:1072375/1‑100 (MQ=255)
 aGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt                                                                                                    >  1:3766893/1‑100 (MQ=255)
 aGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt                                                                                                    <  2:3576906/100‑1 (MQ=255)
 aGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt                                                                                                    >  1:3614611/1‑100 (MQ=255)
  gAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTa                                                                                                   <  2:1682087/100‑1 (MQ=255)
   aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTAc                                                                                                  <  2:3361833/100‑1 (MQ=255)
    aaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACa                                                                                                 <  1:1802574/100‑1 (MQ=255)
    aaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACa                                                                                                 >  2:2359923/1‑100 (MQ=255)
      ggCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTCCaaa                                                                                               >  2:2662000/1‑100 (MQ=255)
        cgctggcgcgttttatccggcctacaataagctcaacatactgatttgtatggttttgtagGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAc                                                                                             >  1:3149153‑M1/62‑100 (MQ=255)
        cGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAc                                                                                             >  1:1222434/1‑100 (MQ=255)
        cGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAc                                                                                             <  1:2309348/100‑1 (MQ=255)
          agaaagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCa                                                                                           <  2:343551/100‑1 (MQ=255)
           gaaagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCa                                                                                           >  1:3316040/1‑99 (MQ=255)
           gaaagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt                                                                                          <  1:325336/100‑1 (MQ=255)
           gaaagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt                                                                                          >  1:2503666/1‑100 (MQ=255)
           gaaagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt                                                                                          <  1:2412377/100‑1 (MQ=255)
             aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaataagctca                                                                                        >  1:3718740/1‑92 (MQ=255)
              agaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACa                                                                                       <  2:1429388/100‑1 (MQ=255)
                  cacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc                                                                                   <  2:164554/100‑1 (MQ=255)
                    cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg                                                                                 >  2:783376/1‑100 (MQ=255)
                    cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg                                                                                 <  2:2734155/100‑1 (MQ=255)
                    cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg                                                                                 >  2:2010898/1‑100 (MQ=255)
                     ccGGTAACGTTGTAAACCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGt                                                                                <  1:3646083/100‑1 (MQ=255)
                     ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGt                                                                                <  1:2630605/100‑1 (MQ=255)
                      cGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTa                                                                               <  2:74279/100‑1 (MQ=255)
                      cGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTa                                                                               <  2:723881/100‑1 (MQ=255)
                         tAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGt                                                                            >  1:1562811/1‑100 (MQ=255)
                         tAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGt                                                                            >  1:1562620/1‑100 (MQ=255)
                           aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTg                                                                          >  2:3100820/1‑100 (MQ=255)
                           aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTg                                                                          >  1:2796042/1‑100 (MQ=255)
                           aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTg                                                                          <  2:578143/100‑1 (MQ=255)
                             gTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAg                                                                        >  2:1503950/1‑100 (MQ=255)
                               tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAg                                                                        >  2:1102126/1‑98 (MQ=255)
                               tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCt                                                                      <  1:2070335/100‑1 (MQ=255)
                                 tAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGCACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTTAGCt                                                                      >  2:1044232/1‑98 (MQ=255)
                                  aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTAt                                                                   >  1:3206733/1‑100 (MQ=255)
                                      ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTa                                                               <  2:1928648/100‑1 (MQ=255)
                                       cAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAg                                                              <  1:498532/100‑1 (MQ=255)
                                        agagACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAgg                                                             <  1:3743910/100‑1 (MQ=255)
                                          agaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGcc                                                           <  1:1754559/100‑1 (MQ=255)
                                          agaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGcc                                                           <  1:783380/100‑1 (MQ=255)
                                           gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCg                                                          <  2:3450742/100‑1 (MQ=255)
                                           gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCg                                                          <  1:1456669/100‑1 (MQ=255)
                                             cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTTTAGGCCGGa                                                        >  2:2273309/1‑100 (MQ=255)
                                             cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCgg                                                         <  1:1329162/99‑1 (MQ=255)
                                              gCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGAt                                                       <  1:536941/100‑1 (MQ=255)
                                               cATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGa                                                        <  1:2298646/98‑1 (MQ=255)
                                               cATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATa                                                      <  1:1050676/100‑1 (MQ=255)
                                                 tCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATaaa                                                    <  1:2093253/100‑1 (MQ=255)
                                                 tCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATaaa                                                    >  1:305829/1‑100 (MQ=255)
                                                   cGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAAc                                                  >  1:2917859/1‑100 (MQ=255)
                                                   cGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAAc                                                  >  1:1902941/1‑100 (MQ=255)
                                                    ggCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAAcg                                                 >  2:2274359/1‑100 (MQ=255)
                                                      cATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAAcgtg                                               <  1:2662017/100‑3 (MQ=255)
                                                      cATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAAcgcg                                               <  1:337349/100‑1 (MQ=255)
                                                       aTTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACCAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAAcgccc                                              >  1:1595756/1‑98 (MQ=255)
                                                       aTTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACgcgc                                              >  2:3366714/1‑100 (MQ=255)
                                                       aTTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACgcgc                                              >  1:361409/1‑100 (MQ=255)
                                                        tttGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGcc                                             <  2:3236513/100‑1 (MQ=255)
                                                           ggTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGc                                          >  1:3126792/1‑100 (MQ=255)
                                                           ggTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGc                                          >  1:3750569/1‑100 (MQ=255)
                                                           ggTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGc                                          >  1:211180/1‑100 (MQ=255)
                                                             ttCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGt                                        <  2:1858788/100‑1 (MQ=255)
                                                              tCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGtt                                       <  1:2238244/100‑1 (MQ=255)
                                                               ttgtaggccggataaggcgttcaagccgcatccggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTg                                      >  1:52845‑M2/37‑100 (MQ=255)
                                                                  gTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCAt                                   >  1:614914/1‑100 (MQ=255)
                                                                  gTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCAt                                   <  1:608196/100‑1 (MQ=255)
                                                                     gccggataaggcgttcaagccgcatccggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCg                                >  1:258634‑M2/31‑100 (MQ=255)
                                                                     GCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCg                                <  2:3794853‑M1/100‑1 (MQ=255)
                                                                      CCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCgg                               <  2:419264‑M1/100‑1 (MQ=255)
                                                                       CGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGc                              >  2:82743‑M1/1‑100 (MQ=255)
                                                                        ggataaggcgttcaagccgcatccggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGc                              >  1:2240101‑M2/28‑99 (MQ=255)
                                                                        ggataaggcgttcaagccgcatccggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCa                             >  2:3177814‑M2/28‑100 (MQ=255)
                                                                         GATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCAt                            >  1:3438678‑M1/1‑100 (MQ=255)
                                                                           TGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCAttt                          >  2:2846494‑M1/1‑100 (MQ=255)
                                                                            gCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTg                         >  1:1594457/1‑100 (MQ=255)
                                                                             cGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTgg                        >  2:2912835/1‑100 (MQ=255)
                                                                             cGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTgg                        <  2:2792548/100‑1 (MQ=255)
                                                                              ggCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGc                       >  2:815147/1‑100 (MQ=255)
                                                                              ggCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGc                       >  2:2315999/1‑100 (MQ=255)
                                                                              ggCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGc                       <  1:78759/100‑1 (MQ=255)
                                                                              ggCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGc                       >  1:961060/1‑100 (MQ=255)
                                                                              ggCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGc                       <  2:361409/100‑1 (MQ=255)
                                                                                 ttGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTcc                    <  1:1391662/100‑1 (MQ=255)
                                                                                  tGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCt                   <  1:275368/100‑1 (MQ=255)
                                                                                   gAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTg                  >  2:3803883/1‑100 (MQ=255)
                                                                                     aCGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGtt                >  2:1063070/1‑100 (MQ=255)
                                                                                        ccTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGcc             >  2:495340/1‑100 (MQ=255)
                                                                                        ccTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAAAGCGCCTGCGTTGCAGCCGGCATTTGGCTCCTGTTGcc             >  2:2656858/1‑100 (MQ=255)
                                                                                        acTTATCCGGCCTCTAAAACAATACAAATCAGTATGTTGATCTTATTGTAGCCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGcc             <  2:1308065/99‑1 (MQ=255)
                                                                                         cTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCg            <  1:2875298/100‑1 (MQ=255)
                                                                                         cTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATCGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCg            <  1:3401649/100‑1 (MQ=255)
                                                                                           tATCCGGCCTACAAAACCAGACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGa          <  1:3449602/100‑1 (MQ=255)
                                                                                               cggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGACCGGATAAAACGCGCCAGCATTGCATCCGTCATTTGGCTCCTGTTGCCGGATgcg      >  2:3642415‑M2/5‑100 (MQ=255)
                                                                                                ggcCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATgcgg     >  1:1151751‑M2/4‑100 (MQ=255)
                                                                                                  cCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATgcggcg   <  1:1842063‑M2/99‑1 (MQ=255)
                                                                                                  cCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATgcggcg   <  1:1740497‑M2/99‑1 (MQ=255)
                                                                                                   cTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGt  <  2:3044551/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
AAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGT  >  NC_000913/2236465‑2236663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.