New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4344813 =NA (NA)19 (0.150) 11/160 NT NA intergenic (+23/+116) melB/yjdF melibiose:sodium symporter/DUF2238 family inner membrane protein
?NC_000913 4344842 = NA (NA)noncoding (28/95 nt) RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 178 total aligned reads displayed.

GTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATC  >  NC_000913/4344743‑4344941
                                                                                                   |                                                                                                   
atgccggatgcggcgtgaattccttatccggtctacaaaattggcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCAc                                                                                                     >  1:1139995‑M1/71‑100 (MQ=255)
 tgccggatgcggcgtgaattccttatccggtctacaaaagttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACg                                                                                                    >  2:1188802‑M1/70‑100 (MQ=255)
 tgccggatgcggcgtgaattccttatccgggctacaaaatttgcaaatctaaagcattacattaagtcgTGGCCTGATGCGATATGTTTATCAGGCCACg                                                                                                    >  2:777037‑M1/70‑100 (MQ=255)
   ccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACGTc                                                                                                  >  1:3845471‑M1/68‑100 (MQ=255)
     tGCTGATCTTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCtt                                                                                                >  1:2077391/1‑100 (MQ=255)
       cTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaa                                                                                              >  2:617992/1‑100 (MQ=255)
       cTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaa                                                                                              >  1:3161102/1‑100 (MQ=255)
       cTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaa                                                                                              >  1:2213802/1‑100 (MQ=255)
        tGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaat                                                                                             >  1:3178667/1‑100 (MQ=255)
         gATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatg                                                                                            >  2:1604753/1‑100 (MQ=255)
                 ggtcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCtt                                                                                    >  1:331195/1‑100 (MQ=255)
                 ggtcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCtt                                                                                    >  1:269478/1‑100 (MQ=255)
                 ggtcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCtt                                                                                    >  2:2172286/1‑100 (MQ=255)
                    cggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTgg                                                                                 <  1:3046168/100‑1 (MQ=255)
                       tGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGAtt                                                                              >  2:1256753/1‑100 (MQ=255)
                        gCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTCATGCGATATGTTTATCAGGCCACGGCTTAATGTAATGCTTTGGAttt                                                                             >  2:2665268/1‑100 (MQ=255)
                          agtgagtgATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCCCGTCTTAATGTAATGCTTTGGATTTGc                                                                           >  1:598112/1‑100 (MQ=255)
                          agtgagtgATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGc                                                                           <  1:3513478/100‑1 (MQ=255)
                           gtgagtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCa                                                                          >  1:1593632/1‑100 (MQ=255)
                               gtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAtt                                                                      >  2:3747213/1‑100 (MQ=255)
                                 tacaaaatttgcaaatccaaagcattacattaagacgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAAtttt                                                                    >  1:1411036‑M2/67‑100 (MQ=255)
                                 gaTGTGAAAGCCTGACGTGGACAATATCTATCGAAAATAGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAtttt                                                                    <  2:212586/100‑1 (MQ=255)
                                  acaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTg                                                                   >  1:744904‑M1/37‑100 (MQ=255)
                                  aTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTg                                                                   <  1:1664106/100‑1 (MQ=255)
                                   tgtgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGt                                                                  <  1:2031683/100‑1 (MQ=255)
                                    aaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTa                                                                 >  1:1411036‑M1/35‑100 (MQ=255)
                                     tgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAg                                                                >  1:3734165/1‑100 (MQ=255)
                                     tgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAg                                                                >  2:2501103/1‑100 (MQ=255)
                                     tgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAg                                                                >  2:2582035/1‑100 (MQ=255)
                                      gAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGa                                                               >  1:3433800/1‑100 (MQ=255)
                                      gAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGa                                                               >  1:736884/1‑100 (MQ=255)
                                          gCCTGACGTGGACACTAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCgg                                                           <  2:2685951/100‑1 (MQ=255)
                                          gCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCgg                                                           >  2:1840007/1‑100 (MQ=255)
                                           ccTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAGATTTTGTAGACCGGa                                                          >  1:3887972/1‑100 (MQ=255)
                                           ccTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGa                                                          <  2:787263/100‑1 (MQ=255)
                                            caaatccaaagcattacattaagacgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGAt                                                         >  1:1566271‑M2/56‑100 (MQ=255)
                                             tGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATa                                                        >  1:2209734/1‑100 (MQ=255)
                                              gACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATaa                                                       >  1:3682670/1‑100 (MQ=255)
                                                 gTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGa                                                    >  1:2859402/1‑100 (MQ=255)
                                                  tGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGaa                                                   >  1:832204/1‑100 (MQ=255)
                                                  tGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGaa                                                   <  1:1111955/100‑1 (MQ=255)
                                                   ggACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGAAGACCGGATAAGGAAt                                                  >  2:2305249/1‑100 (MQ=255)
                                                     aCAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTc                                                >  2:1412723/1‑100 (MQ=255)
                                                      gcattacattaagacgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCa                                               >  2:1995617‑M2/46‑100 (MQ=255)
                                                      cAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCa                                               >  2:966793/1‑100 (MQ=255)
                                                      cAATAGCTAACGAAAATGACCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTGATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCa                                               >  1:929223/1‑100 (MQ=255)
                                                      cAATAGCTAACGAAAAAGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGACAAGGAATTCa                                               >  2:2075096/1‑100 (MQ=255)
                                                       aaTAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAAt                                                  <  2:3358279/96‑1 (MQ=255)
                                                        aTAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcg                                             <  1:2381990/100‑1 (MQ=255)
                                                        aTAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTACAAATTTTGTAGACCGGATAAGGAATTCAcg                                             <  1:2202454/100‑1 (MQ=255)
                                                         tAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgc                                            <  2:2055765/100‑1 (MQ=255)
                                                         tAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgc                                            <  1:1604762/100‑1 (MQ=255)
                                                         tAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgc                                            >  1:3509882/1‑100 (MQ=255)
                                                          aGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgcc                                           <  1:1058812/100‑1 (MQ=255)
                                                          aGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgcc                                           <  1:918141/100‑1 (MQ=255)
                                                           gCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccg                                          <  2:3192837/100‑1 (MQ=255)
                                                           gCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccg                                          <  1:2492894/100‑1 (MQ=255)
                                                           gCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccg                                          >  1:2439927/1‑100 (MQ=255)
                                                             tAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCa                                        <  1:3021447/100‑1 (MQ=255)
                                                               aCGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATc                                      >  2:1549696/1‑100 (MQ=255)
                                                               aCGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATc                                      >  2:2009914/1‑100 (MQ=255)
                                                               aCGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATc                                      >  1:394372/1‑100 (MQ=255)
                                                                cGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATcc                                     >  1:3367114/1‑100 (MQ=255)
                                                                 gAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCg                                    >  1:1998515/1‑100 (MQ=255)
                                                                 agacgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCg                                    >  1:3333695‑M2/35‑100 (MQ=255)
                                                                  gacgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCgg                                   >  1:740312‑M2/34‑100 (MQ=255)
                                                                  aaaaTGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCgg                                   >  2:1787652/1‑100 (MQ=255)
                                                                    cgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCa                                 >  2:498863‑M2/32‑100 (MQ=255)
                                                                    cgtggcctgataaacatatcgcatcaggccaCGACTTAATGTAATGATTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCCGCa                                 >  2:2360429‑M2/32‑100 (MQ=255)
                                                                    aaTGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCa                                 <  2:385905/100‑1 (MQ=255)
                                                                      tggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATc                               >  2:2551712‑M2/30‑100 (MQ=255)
                                                                      tggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATc                               >  2:1699669‑M2/30‑100 (MQ=255)
                                                                      tggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACAGGATAAGGAATTCACGCCGCATCCGGCAt                                >  2:1073166‑M2/30‑99 (MQ=255)
                                                                       ggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATca                              >  1:399267‑M2/29‑100 (MQ=255)
                                                                       ggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATca                              >  1:3309587‑M2/29‑100 (MQ=255)
                                                                        gcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaa                             >  1:1456644‑M2/28‑100 (MQ=255)
                                                                        gcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaa                             >  1:1505640‑M2/28‑100 (MQ=255)
                                                                        GCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaa                             <  2:1568354‑M1/100‑1 (MQ=255)
                                                                         CCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaac                            >  2:2329941‑M1/1‑100 (MQ=255)
                                                                         CCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaac                            <  2:194485‑M1/100‑1 (MQ=255)
                                                                          CTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaaca                           >  2:3730711‑M1/1‑100 (MQ=255)
                                                                                cGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaacaagatcg                     >  1:58659/1‑95 (MQ=255)
                                                                                cGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCCGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgcgc                     <  2:540668/100‑1 (MQ=255)
                                                                                 gATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCa                    <  2:3432544/100‑1 (MQ=255)
                                                                                  atatGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCaa                   >  1:3840561/1‑100 (MQ=255)
                                                                                   tatGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAg                  <  1:2004510/100‑1 (MQ=255)
                                                                                   tatGTTTATCAGGCCACGTCTTAATGTAATGCTTAGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAg                  <  2:2077380/100‑1 (MQ=255)
                                                                                     tGTTTATCAGGCCACGTCTTAATGTAATGCGTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgtt                >  1:3788212/1‑100 (MQ=255)
                                                                                        ttATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgttgtt             >  1:1221326/1‑100 (MQ=255)
                                                                                        ttATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgttgtn             <  2:3842906/100‑2 (MQ=255)
                                                                                         tATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTa            >  2:490132/1‑100 (MQ=255)
                                                                                          aTCACGCCACGTCTCAATGTACTGCTTTGGATTTCCACATTTTGTAGCCCGGATAAGGCCTTCAAGCCGCCTCCGGCATCAACAAGGCGCCAgttgt              <  2:1311480/97‑1 (MQ=19)
                                                                                            caggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATcc         <  1:2502871‑M2/93‑1 (MQ=255)
                                                                                            caggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATcc         <  1:787143‑M2/93‑1 (MQ=255)
                                                                                              ggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCgg       <  1:3752112‑M2/95‑1 (MQ=255)
                                                                                              ggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCgg       <  2:353599‑M2/95‑1 (MQ=255)
                                                                                              ggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCgg       >  1:1953417‑M2/6‑100 (MQ=255)
                                                                                               gccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCATGTTGTTATccgtt      <  1:2665285‑M2/96‑3 (MQ=255)
                                                                                                ccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGtt     <  2:2921882‑M2/97‑1 (MQ=255)
                                                                                                  aCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTa    <  2:608764‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                   
GTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATC  >  NC_000913/4344743‑4344941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.