New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4570520139 (0.980)13 (0.100) 8/168 NT 9.1% coding (1055/1413 nt) yjiR putative DNA‑binding transcriptional regulator/putative aminotransferase
?NC_000913 = 4570536 129 (0.970)coding (1039/1413 nt) yjiR putative DNA‑binding transcriptional regulator/putative aminotransferase
Rejected: Frequency below cutoff threshold.

Only 100 of 162 total aligned reads displayed.

TATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCACGCGCAGGCCTGGTGCAAT  >  NC_000913/4570437‑4570632
                                                                                                   |                                                                                                
tataAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGa                                                                                                  >  2:1433546/1‑100 (MQ=255)
    aaGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGAcggc                                                                                              >  2:1092116‑M2/1‑96 (MQ=255)
     aGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGAcggca                                                                                             >  1:677061‑M2/1‑95 (MQ=255)
      gcgcCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGcac                                                                                            >  1:1095283/1‑100 (MQ=255)
      gcgcCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGcac                                                                                            >  2:3694273/1‑100 (MQ=255)
      gcgcCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGcac                                                                                            <  2:195386/100‑1 (MQ=255)
      gcgcCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGcac                                                                                            <  1:2433319/100‑1 (MQ=255)
       cgcCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGcaca                                                                                           >  2:47293/1‑100 (MQ=255)
         ccAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACAtt                                                                                         >  2:1028037/1‑100 (MQ=255)
          cAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTa                                                                                        <  1:159485/100‑1 (MQ=255)
            aaTTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTaaa                                                                                      >  1:3439663/1‑100 (MQ=255)
             aTTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAg                                                                                     <  2:835995/100‑1 (MQ=255)
             aTTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAg                                                                                     <  1:849885/100‑1 (MQ=255)
             aTTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAg                                                                                     <  1:3185303/100‑1 (MQ=255)
              ttGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAgc                                                                                    <  1:304341/100‑1 (MQ=255)
              ttGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAgc                                                                                    <  2:1678254/100‑1 (MQ=255)
                gcgcTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAgctg                                                                                  >  1:2881256/1‑100 (MQ=255)
                 cgcTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAgctgc                                                                                 <  2:3404743/100‑1 (MQ=255)
                 cgcTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAgctgc                                                                                 <  2:1182671/100‑1 (MQ=255)
                  gcTCATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAgctgct                                                                                <  2:2726156/100‑1 (MQ=255)
                   cTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGctgctg                                                                               >  1:2833212/1‑100 (MQ=255)
                     gATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGAt                                                                             <  1:3447678/100‑1 (MQ=255)
                       tAGATCTGCCGCATCCGCCGGATATGGCGCTGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGATGATgg                                                                           >  2:465466/1‑100 (MQ=255)
                       tAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAACCGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATg                                                                            <  2:1563730/99‑1 (MQ=255)
                        aGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGc                                                                          >  2:2314131/1‑100 (MQ=255)
                        aGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGc                                                                          <  2:2851656/100‑1 (MQ=255)
                         gATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCg                                                                         >  1:1132677/1‑100 (MQ=255)
                         gATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCg                                                                         <  2:3449333/100‑1 (MQ=255)
                         gATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCg                                                                         <  1:2667038/100‑1 (MQ=255)
                         gATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCg                                                                         <  1:874847/100‑1 (MQ=255)
                          aTCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGt                                                                        >  1:1784925/1‑100 (MQ=255)
                           tCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTa                                                                       <  1:3649658/100‑1 (MQ=255)
                              gCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTAttt                                                                    >  2:2582558/1‑100 (MQ=255)
                              gCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTAttt                                                                    >  1:1507328/1‑100 (MQ=255)
                                 gCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCat                                                                 <  1:2582575/100‑1 (MQ=255)
                                  cATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCata                                                                <  1:2791692/100‑1 (MQ=255)
                                  cATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCata                                                                >  1:2762336/1‑100 (MQ=255)
                                  cATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCata                                                                <  1:2244719/100‑1 (MQ=255)
                                   aTCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCata                                                                <  1:3739552/99‑1 (MQ=255)
                                   aTCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCATATTTCatat                                                               >  2:213737/1‑100 (MQ=255)
                                      cgccgGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCa                                                            >  1:3570247/1‑100 (MQ=255)
                                      cgccgGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCa                                                            <  2:30763/100‑1 (MQ=255)
                                      cgcaggaagtGGTGATGATAGTGCCCCTCCGGCACAAAAGATGTCGCGGCCATTTGCGTGGACGGGAGATTAACGGTGGAGATGGCGTATTTCgta                                                                <  2:1246591/87‑1 (MQ=255)
                                       gccgGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCAt                                                           >  1:1681426/1‑100 (MQ=255)
                                       gccgGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCAt                                                           >  1:638936/1‑100 (MQ=255)
                                           gATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGt                                                       >  1:1879087/1‑100 (MQ=255)
                                            atatGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGtt                                                      <  2:3858254/100‑1 (MQ=255)
                                            atatGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGtt                                                      <  2:596355/100‑1 (MQ=255)
                                               tGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTAt                                                   >  1:3200109/1‑100 (MQ=255)
                                               tGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATCCATCAGTTTa                                                    >  2:1222642/1‑99 (MQ=255)
                                                 gCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCg                                                 >  2:3360264/1‑100 (MQ=255)
                                                 gCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCg                                                 <  1:882084/100‑1 (MQ=255)
                                                  cGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGt                                                <  1:3875475/100‑1 (MQ=255)
                                                  cGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGt                                                <  2:3570221/100‑1 (MQ=255)
                                                  cGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCACTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGt                                                <  1:3003354/100‑1 (MQ=255)
                                                   gatgatAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGCCGGCACCTTAAAGCTGCTGATGGCGTATTTCATATGCCTCAGTTTATCGTg                                               >  2:1338101/1‑100 (MQ=255)
                                                   gatgatAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTg                                               >  1:1676460/1‑100 (MQ=255)
                                                     tgatAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGAt                                             >  2:3088447/1‑100 (MQ=255)
                                                      gatAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATa                                            >  1:2294538/1‑100 (MQ=255)
                                                       atAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATaa                                           >  1:793821/1‑100 (MQ=255)
                                                        tAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAAc                                          >  1:1520434/1‑100 (MQ=255)
                                                          gTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGc                                        <  2:1798241/100‑1 (MQ=255)
                                                          gTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGc                                        <  1:364992/100‑1 (MQ=255)
                                                           tGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGcc                                       >  2:1415148/1‑100 (MQ=255)
                                                            gACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGccc                                      >  1:2367431/1‑100 (MQ=255)
                                                             aCCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGcccc                                     >  2:2460587/1‑100 (MQ=255)
                                                             aCCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGcccc                                     <  2:487843/100‑1 (MQ=255)
                                                              ccTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGTCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCg                                    <  2:3744634/100‑1 (MQ=255)
                                                               cTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCgg                                   >  1:60015/1‑100 (MQ=255)
                                                               cTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCgg                                   >  1:1827389/1‑100 (MQ=255)
                                                                ttCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCgg                                   <  2:1236620/99‑1 (MQ=255)
                                                                 tCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTg                                 >  2:690680/1‑100 (MQ=255)
                                                                 tCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATCGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTg                                 <  1:2067746/100‑1 (MQ=255)
                                                                  ccAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGc                                <  2:2278503/100‑1 (MQ=255)
                                                                     gCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGac                             <  1:113012/100‑1 (MQ=255)
                                                                     gCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGac                             <  1:1030265/100‑1 (MQ=255)
                                                                     gCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGac                             <  1:2035546/100‑1 (MQ=255)
                                                                     gCACAAACGTTGCAGCCGCCCTGTTCGTGGACGGCACAGTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGa                              <  2:1174698/99‑1 (MQ=255)
                                                                      cacaAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGacc                            <  2:1101511/100‑1 (MQ=255)
                                                                       acaAACGTTGCCGCCGCCATTTGCGTGGAcggcaacgtttgtgctggaaggtcactatcatcgccatatccggcggatgcggcagatctatcagcgcaat                           <  1:1367429‑M2/100‑72 (MQ=255)
                                                                         aaaCGTTGCCGCCGCCATTTGCGTGGAcggcaacgtttgtgctggaaggtcactatcatcgccatatccggcggatgcggcagatctatcagcgcaattt                         <  1:534483‑M2/100‑74 (MQ=255)
                                                                         aaaCGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGacccaa                         >  2:440909/1‑100 (MQ=255)
                                                                         aaaCGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGaccca                          <  1:2141557/99‑1 (MQ=255)
                                                                          aaCGTTGCCGCCGCCATTTGCGTGGAcggcaacgtttgtgctggaaggtcactatcatcgccatatccggcggatgcggcagatctatcagcgagatcgg                        <  1:495785‑M2/100‑75 (MQ=255)
                                                                            cGTTGCCGCCGCCATTTGCGTGGAcggcaacgtttgtgctggaaggtcactatcatcgccatatccggcggatgcggcagatctatcagcgcaatttggc                      <  1:1298906‑M2/100‑77 (MQ=255)
                                                                             gTTGCCGCCGCCATTTGCGTGGAcggcaacgtttgtgctggaaggtcactatcatcgccatatccggcggatgcggcagatctatcagcgcaatttggcg                     <  2:712186‑M2/100‑78 (MQ=255)
                                                                                gccgccgccATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCAcgc                  >  2:3038796/1‑100 (MQ=255)
                                                                                 ncgccgccATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCAcgcg                 >  2:3436072/2‑100 (MQ=255)
                                                                                 ccgccgccATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCAcgcg                 >  1:389379/1‑100 (MQ=255)
                                                                                   gccgccATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCACgcgc                >  2:2186428/1‑99 (MQ=255)
                                                                                    ccgccATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCACGCGCAg              >  2:2859078/1‑100 (MQ=255)
                                                                                      gccATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTACTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCAcgcg                 <  2:2743556/95‑1 (MQ=255)
                                                                                       ttccgatcttGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCACGCGCAGGcc           <  1:3160084/91‑1 (MQ=255)
                                                                                       ccATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCACGCGCAGGcc           <  2:2629629/100‑1 (MQ=255)
                                                                                         aTTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCACGCGCAGGCCTg         <  1:1415157/100‑1 (MQ=255)
                                                                                            tGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCACCGGTGCGACCCAACCCACGCGCAGGCCTGGt       >  1:401379/1‑99 (MQ=255)
                                                                                             gCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCACGCGCAGGCCTGGTGc     <  1:2849034/100‑1 (MQ=255)
                                                                                             gCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCACGCGCAGGCCTGGTGc     >  1:2153104/1‑100 (MQ=255)
                                                                                              cGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCACGCGCAGGCCTGGTGCa    >  1:2037894/1‑100 (MQ=255)
                                                                                                tGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCACGCGCAGGccagatcggaa  >  2:3160063/1‑91 (MQ=255)
                                                                                                   |                                                                                                
TATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAAACGTTGCCGCCGCCATTTGCGTGGACGGCACATTAAAGCTGCTGATGGCGTATTTCATATGCATCAGTTTATCGTGATAACGCCCCGGTGCGACCCAACCCACGCGCAGGCCTGGTGCAAT  >  NC_000913/4570437‑4570632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.