Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,326,752 G→C 15.4% S215T (AGT→ACT)  atoB → acetyl‑CoA acetyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,326,7520GC15.4% 400.2 / 58.6 142S215T (AGT→ACT) atoBacetyl‑CoA acetyltransferase
Reads supporting (aligned to +/- strand):  ref base G (58/62);  new base C (12/10);  total (70/72)
Fisher's exact test for biased strand distribution p-value = 6.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01

Only 100 of 149 total aligned reads displayed.

ATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCTGGGAACGCGTC  >  NC_000913/2326653‑2326851
                                                                                                   |                                                                                                   
aTTGACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCTGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAg                                                                                                     <  2:2442457/100‑1 (MQ=255)
aTTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCTAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAg                                                                                                     <  1:249604/100‑1 (MQ=255)
aTTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAg                                                                                                     <  2:671218/100‑1 (MQ=255)
 ttCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGt                                                                                                    >  1:452258/1‑100 (MQ=255)
   cacaGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCa                                                                                                  >  1:2270481/1‑100 (MQ=255)
    acaGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCaa                                                                                                 <  1:3574290/100‑1 (MQ=255)
     caGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAGTGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAg                                                                                                >  1:2961911/1‑100 (MQ=255)
       gCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGAc                                                                                              >  2:3243283/1‑100 (MQ=255)
        cGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACg                                                                                             <  1:1822924/100‑1 (MQ=255)
         gTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGa                                                                                            >  2:886004/1‑100 (MQ=255)
           aaaGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTGACTGAAGACGaag                                                                                          <  1:1063494/100‑2 (MQ=255)
           aaaGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAAt                                                                                          >  2:583969/1‑100 (MQ=255)
            aaGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTGACTGAAGACGaagg                                                                                         <  2:3471168/100‑3 (MQ=255)
            aaGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTGACTGAAGACGaag                                                                                          <  2:1161661/99‑2 (MQ=255)
             aGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTGACTGAAGACGaaggt                                                                                        <  2:3003755/100‑4 (MQ=255)
              gCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTGACTGAAGACGaaggtt                                                                                       <  2:1158943/100‑5 (MQ=255)
              gCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTGACTGAAGACGaaggtt                                                                                       <  1:3393686/100‑5 (MQ=255)
                ggCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCg                                                                                     <  1:44712/100‑1 (MQ=255)
                ggCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCg                                                                                     <  1:2514341/100‑1 (MQ=255)
                 gCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTGACTGAAGACGaaggttttc                                                                                    <  2:1769781/100‑8 (MQ=38)
                  cAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTGACTGAAGACGaaggttttct                                                                                   <  2:2684032/100‑9 (MQ=38)
                   aGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGaaa                                                                                  <  1:3189973/100‑1 (MQ=255)
                     ccGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGc                                                                                >  1:2255418/1‑100 (MQ=255)
                      cGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCg                                                                               <  1:3932041/100‑1 (MQ=255)
                      cGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCg                                                                               >  2:2992466/1‑100 (MQ=255)
                      cGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCg                                                                               >  1:713163/1‑100 (MQ=255)
                          aTTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAAtt                                                                           <  1:2991701/100‑1 (MQ=255)
                           ttGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTc                                                                          <  1:3392244/100‑1 (MQ=255)
                            tGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCa                                                                         <  1:109822/100‑1 (MQ=255)
                             gAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCaa                                                                        <  2:2155576/100‑1 (MQ=255)
                               gTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACg                                                                      >  2:476734/1‑100 (MQ=255)
                                tCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACgg                                                                     <  1:3488646/100‑1 (MQ=255)
                                 ccGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGc                                                                    <  1:3265304/100‑1 (MQ=255)
                                  cGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCt                                                                   >  1:2372561/1‑100 (MQ=255)
                                  cGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCt                                                                   >  1:1745025/1‑100 (MQ=255)
                                   ggTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTg                                                                  <  2:2234485/100‑1 (MQ=255)
                                     tGCTTTTACAGCCGAACTCGTCCCGGTAAATGTTGTCACTCGAAAGAAATCCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGaa                                                                <  2:1485657/100‑1 (MQ=255)
                                      gCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATGCCCGAAAGCGAATTCAACGGCTGaa                                                                >  2:1376428/1‑99 (MQ=255)
                                       cTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGc                                                              >  2:447255/1‑100 (MQ=255)
                                         tttACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGt                                                            >  2:3718804/1‑100 (MQ=255)
                                         tttACAGCCGAAATCGTCCCGATAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGt                                                            >  2:3718619/1‑100 (MQ=255)
                                          ttACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGtt                                                           >  1:1603804/1‑100 (MQ=255)
                                           tACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTa                                                          <  1:662565/100‑1 (MQ=255)
                                           tACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTa                                                          <  1:1678509/100‑1 (MQ=255)
                                           tACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTa                                                          <  1:2922812/100‑1 (MQ=255)
                                           tACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTa                                                          >  1:2867050/1‑100 (MQ=255)
                                             cAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAgg                                                        >  1:1774651/1‑100 (MQ=255)
                                             cAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAgg                                                        >  1:1420044/1‑100 (MQ=255)
                                             cAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAgg                                                        <  2:3167603/100‑1 (MQ=255)
                                               gCCGAAATCGTCCCGGTAAATGTTGTCACTGGAAAGAAAACCTTCGTCTTCAGTCCGGACGAATTCCAGAAAGCGAATTCAACGGCTGAAGCGTTAGGt                                                       >  2:911509/1‑99 (MQ=255)
                                               gCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTg                                                      <  1:1719275/100‑1 (MQ=255)
                                                ccGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGc                                                     <  2:404676/100‑1 (MQ=255)
                                                 cGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCa                                                    <  2:3630970/100‑1 (MQ=255)
                                                    aaTCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCTCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTg                                                 <  2:2436579/100‑1 (MQ=255)
                                                      tCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTgcg                                               <  1:3095231/100‑1 (MQ=255)
                                                        gTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGcc                                             >  1:1185018/1‑100 (MQ=255)
                                                           ccGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCgg                                          <  1:1245190/100‑1 (MQ=255)
                                                           ccGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCgg                                          >  1:3348701/1‑100 (MQ=255)
                                                           ccGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCgg                                          >  1:1748565/1‑100 (MQ=255)
                                                           ccGGTAAATGTAGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCgg                                          >  2:3028671/1‑100 (MQ=255)
                                                            cGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGc                                         <  1:104179/100‑1 (MQ=255)
                                                              gTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAGCGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCt                                       <  2:2569769/100‑1 (MQ=255)
                                                              gTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGcc                                        >  2:557696/1‑99 (MQ=255)
                                                                aaaTGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTc                                     <  1:892451/100‑1 (MQ=255)
                                                                 aaTGTTTTCTCTCGAAAGAAAACCTTCGGCTTCAGTCAAGTCTAATTCCCTAAAGCGATTTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCg                                    <  1:2298591/100‑1 (MQ=255)
                                                                 aaTGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCg                                    <  1:1732335/100‑1 (MQ=255)
                                                                   tgttgtCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGa                                   <  1:1224591/99‑1 (MQ=255)
                                                                   tgttgtCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGAt                                  <  2:3386660/100‑1 (MQ=255)
                                                                   tgttgtCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGAt                                  >  2:3891736/1‑100 (MQ=255)
                                                                   tgttgtCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGAt                                  <  1:1558595/100‑1 (MQ=255)
                                                                   tgttgtCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGAt                                  <  2:3109821/100‑1 (MQ=255)
                                                                     ttgtCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATaa                                <  2:3732232/100‑1 (MQ=255)
                                                                     ttgtCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATaa                                <  2:1185009/100‑1 (MQ=255)
                                                                      tgtCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCGTTGCGCCCGGCCTTCGATaaa                               >  2:3175179/1‑100 (MQ=255)
                                                                       gtCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAg                              <  2:420035/100‑1 (MQ=255)
                                                                        tCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGc                             <  1:3918735/100‑1 (MQ=255)
                                                                           cTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAgg                          >  2:3697773/1‑100 (MQ=255)
                                                                            tCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGa                         <  1:3243305/100‑1 (MQ=255)
                                                                            tCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGa                         >  1:87608/1‑100 (MQ=255)
                                                                              gaaagaaaACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAAc                       >  1:3827873/1‑100 (MQ=255)
                                                                                  tcgggaattCGTCTTGACTGAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTc                   >  1:1211367/8‑100 (MQ=38)
                                                                                  gaaaACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTc                   <  1:2062208/100‑1 (MQ=255)
                                                                                  gaaaACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTc                   <  1:1177452/100‑1 (MQ=255)
                                                                                   aaaaCCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCa                  <  1:3095327/100‑1 (MQ=255)
                                                                                    gggaattCGTCTTGACTGAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCAc                 >  2:2142035/6‑100 (MQ=38)
                                                                                    aaaCCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCAc                 <  2:1048574/100‑1 (MQ=255)
                                                                                     ggaattCGTCTTGACTGAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCAcc                >  1:725454/5‑100 (MQ=255)
                                                                                     ggaattCGTCTTGACTGAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCAcc                >  2:1059512/5‑100 (MQ=255)
                                                                                     ggaattCGTCTTGACTGAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAACCAGGAACAGTCAcc                >  2:3241987/5‑100 (MQ=255)
                                                                                      gaattCGTCTTGACTGAAGACGAATTCCCGAAAGCGAATTCAACGGCTGACGCGTTAGGTGCATTGCGCCCGGCCTTCGATAACGCAGGACCAGTCAc                 >  2:1500504/4‑98 (MQ=255)
                                                                                        cTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCt             >  1:2695430/1‑100 (MQ=255)
                                                                                        attCGTCTTGACTGAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCt             >  2:3382922/2‑100 (MQ=255)
                                                                                          tCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCTgg           <  1:2151852/100‑1 (MQ=255)
                                                                                           cGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCTggg          <  2:1663855/100‑1 (MQ=255)
                                                                                              cTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCTGGGAAc       <  1:1541808/100‑1 (MQ=255)
                                                                                              cTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCTGGGAAc       >  2:635560/1‑100 (MQ=255)
                                                                                               ttCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCTGGGAAcg      >  2:3443142/1‑100 (MQ=255)
                                                                                               ttCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCTGGGAAcg      <  1:3087707/100‑1 (MQ=255)
                                                                                                 cAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCTGGGAAcgcg    >  1:3475938/1‑100 (MQ=255)
                                                                                                   gTCAAGACGAATTCCCGAAAGCAAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCTGGGAACGCGTc  >  2:2285215/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCTGGGAACGCGTC  >  NC_000913/2326653‑2326851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: