Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,980,746 C→T 15.7% intergenic (‑111/+18) ygeA ← / ← araE Asp/Glu_racemase family protein/arabinose transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,980,7460CT15.7% 479.5 / 60.7 189intergenic (‑111/+18)ygeA/araEAsp/Glu_racemase family protein/arabinose transporter
Reads supporting (aligned to +/- strand):  ref base C (84/75);  new base T (17/13);  total (101/88)
Fisher's exact test for biased strand distribution p-value = 8.42e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01

Only 100 of 197 total aligned reads displayed.

GATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGG  >  NC_000913/2980647‑2980844
                                                                                                   |                                                                                                  
  tgtgtgTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGcac                                                                                                  >  2:2036631/1‑100 (MQ=255)
     gtgtTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATc                                                                                               >  2:1433957/1‑100 (MQ=255)
     gtgtTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATc                                                                                               >  2:3652807/1‑100 (MQ=255)
       gtTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCg                                                                                             <  1:2526522/100‑1 (MQ=255)
        ttACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCgg                                                                                            <  2:1817027/100‑1 (MQ=255)
         tACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTGCTGTACATCCGGc                                                                                           <  2:2798603/100‑1 (MQ=255)
         tACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTGCTGTACATCCGGc                                                                                           <  1:2625863/100‑1 (MQ=255)
         tACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGc                                                                                           <  2:676064/100‑1 (MQ=255)
         tACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGc                                                                                           >  1:3601761/1‑100 (MQ=255)
         tACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGc                                                                                           <  1:1304445/100‑1 (MQ=255)
          aacgaaacaaGGAAGAATAAAAAACTAAACAAACGCTTCAACGGCCAAGTGCCCAATAAAAAAAAAAAAAAAAAGGGCCGGATGTACAGCACATCCg                                                                                             <  2:2087172/92‑1 (MQ=255)
          aCCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGcc                                                                                          <  2:1683410/100‑1 (MQ=255)
          aCCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCACAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGcc                                                                                          >  2:2113852/1‑100 (MQ=255)
           ccGCAACAAGGTTGAATATGGAACGAGACAAACGCCTGAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGTCGGATGTACAGCACATCTgg                                                                                            >  2:3755386/1‑97 (MQ=255)
           ccGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTGCTGTACATCCGGccc                                                                                         <  2:1955160/100‑1 (MQ=39)
           ccGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGccc                                                                                         >  2:36813/1‑100 (MQ=255)
            cGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCg                                                                                        >  1:330750/1‑100 (MQ=255)
             gCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCg                                                                                        >  1:3769185/1‑99 (MQ=255)
             gCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGt                                                                                       >  1:3199149/1‑100 (MQ=255)
              caacaaGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTg                                                                                      <  1:2229967/100‑1 (MQ=255)
              caacaaGACTGAATAAGGAACAAAGCAAACGCATCAACGGCCAAGTGCCCAATAAAAATAAAAAAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTg                                                                                      <  2:919442/100‑1 (MQ=255)
                acaaGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGaaa                                                                                   >  1:2133691/1‑100 (MQ=255)
                acaaGGATAAATAAGGAGCGAGACAGACGCCTCAACGGCCAAGTTTCCAATCTCTATTAACGAAATAAGGGCCTGATGTGCGGTACGTCCGGc                                                                                           <  2:1932422/93‑1 (MQ=255)
                 caaGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGaaa                                                                                   >  1:489314/1‑100 (MQ=255)
                  aaGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTGCTGTACATCCGGcccttttttc                                                                                  <  1:2390375/100‑8 (MQ=37)
                  aaGGCTGAAAAAAGAACGAGACAAACGCCTCAACGGCCAATTGCCCAATAAAAAAAAAAAAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAAt                                                                                  <  2:101585/100‑1 (MQ=255)
                   aGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATc                                                                                 <  1:3080023/100‑1 (MQ=255)
                   aGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATc                                                                                 >  2:1493586/1‑100 (MQ=255)
                    ggCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCa                                                                                <  2:3408249/100‑1 (MQ=255)
                     gCTCAATACGCAACAAGACAAACGCCTCAACGACCAGTTGCCCAATCCCTATTAACGACAAAAGGGCCGGATGTACAACACATCCGGCCCGTGAAATCat                                                                               <  2:2895077/100‑2 (MQ=255)
                      cTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGa                                                                              >  1:988104/1‑100 (MQ=255)
                      cTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGa                                                                              <  1:1198468/100‑1 (MQ=255)
                      cTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGa                                                                              >  1:1907989/1‑100 (MQ=255)
                       tGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGAc                                                                             >  2:1344796/1‑100 (MQ=255)
                        gAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATGAGACg                                                                            >  2:437516/1‑100 (MQ=255)
                        gAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACg                                                                            >  2:297327/1‑100 (MQ=255)
                          aTAATGAACGATACAAACGCCTCAACTGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGcc                                                                          <  1:1705492/100‑1 (MQ=255)
                             aGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGat                                                                       <  1:3661594/100‑1 (MQ=255)
                              ggAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGata                                                                      >  1:1558746/1‑100 (MQ=255)
                               gAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTCTTAACGAAAAAAGGCCCGGATGTACAGCCCATCCAGCCCGTGAAATCAGCCGCCGa                                                                        >  2:3817779/1‑97 (MQ=255)
                               gAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATCAACGAAAAAAGGGGCGGATGTACAGCACATACGGCCCGTGAAATCAGACGCCGatat                                                                     >  1:2942098/1‑100 (MQ=255)
                                  cGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTtc                                                                  <  2:122092/100‑1 (MQ=255)
                                   gagaCAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTtct                                                                 >  1:1126178/1‑100 (MQ=255)
                                    agaCAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTtctc                                                                >  2:53790/1‑100 (MQ=255)
                                    agaCAAACGCCTCAACGGCCAAGTGCCCAATAAAAATTAAAAAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTtctc                                                                <  2:1171585/100‑1 (MQ=255)
                                      aCAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCaa                                                              >  1:1043877/1‑100 (MQ=255)
                                          aCGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTtc                                                          <  1:622415/100‑1 (MQ=255)
                                             ccTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCg                                                       >  2:1993176/1‑100 (MQ=255)
                                              cTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGc                                                      <  2:1738788/100‑1 (MQ=255)
                                               tCAACGGCGAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGcc                                                     <  2:1496966/100‑1 (MQ=255)
                                                cAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTTAAATCAGACGCCGATATTTCTCAACTTCTCGCCt                                                    >  1:3332250/1‑100 (MQ=255)
                                                cAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCt                                                    <  1:1040970/100‑1 (MQ=255)
                                                cAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCt                                                    <  1:3449300/100‑1 (MQ=255)
                                                      ccAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATc                                              <  1:3578705/100‑1 (MQ=255)
                                                      ccAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATc                                              >  2:427255/1‑100 (MQ=255)
                                                        aaGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAg                                            <  1:2367350/100‑1 (MQ=255)
                                                        aaGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAg                                            >  1:277975/1‑100 (MQ=255)
                                                         aGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGt                                           >  1:758087/1‑100 (MQ=255)
                                                            gCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTg                                        >  2:2572387/1‑100 (MQ=255)
                                                              ccAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCg                                      <  2:723825/100‑1 (MQ=255)
                                                               cAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGt                                     <  2:860291/100‑1 (MQ=255)
                                                                 aTCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTc                                   <  1:343615/100‑1 (MQ=255)
                                                                  tctcTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCg                                  >  1:1087689/1‑100 (MQ=255)
                                                                   cactATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCg                                  <  1:899345/97‑1 (MQ=255)
                                                                    tctATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGat                                <  1:548936/100‑1 (MQ=255)
                                                                    tctATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGat                                <  1:1837733/100‑1 (MQ=255)
                                                                     ctATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGTCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGata                               >  2:2426626/1‑100 (MQ=255)
                                                                     ctATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGata                               <  1:2982401/100‑1 (MQ=255)
                                                                     ctATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGata                               >  2:3174499/1‑100 (MQ=255)
                                                                     ctATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCAATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGata                               >  2:2231710/1‑100 (MQ=255)
                                                                       aTTAACGAAAAAAGGGCCGGATGTACAGCACATCCGACCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTTGATATg                             >  2:3899639/1‑100 (MQ=255)
                                                                        ttAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGt                            >  1:3322203/1‑100 (MQ=255)
                                                                          aaCGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTc                          >  1:2463638/1‑100 (MQ=255)
                                                                           aCGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTcc                         <  1:2036642/100‑1 (MQ=255)
                                                                              tttcacgggCCGGATGTGCTGTACATCCGGCCCTTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGc                      >  1:845652/7‑100 (MQ=25)
                                                                                aaaaGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGt                    <  1:1749002/100‑1 (MQ=255)
                                                                                aaaaGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGt                    <  1:2243760/100‑1 (MQ=255)
                                                                                   cgggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGAc                 >  1:3339837/2‑100 (MQ=38)
                                                                                   cgggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATCTTCCAGCGTGa                  >  2:3273800/2‑99 (MQ=38)
                                                                                   cgggCCGGATGCGCTGTCCATCCGGCCCGTGACATGAGACGCCGCTATTTCTCAACTGCTCTCCTTCCATCAGTTTGCGTGCGACGTGTCCCACCGt                    >  2:2356138/2‑97 (MQ=255)
                                                                                    gggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACa                >  2:221526/1‑100 (MQ=39)
                                                                                    gggCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACa                >  2:2883786/1‑100 (MQ=255)
                                                                                     ggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAt               >  1:1661303/1‑100 (MQ=39)
                                                                                     ggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATATTCCAGCGTGACAt               >  2:2686189/1‑100 (MQ=38)
                                                                                     ggCCGGATGTGCTGTACATCCCGCTCGTGAAACCGGACGCCGATAATTCTCAACTTCACGCAAGCCATCAGGTTGAGATGGATATGTTCCAGCGTGa                  >  2:2079612/1‑97 (MQ=255)
                                                                                     ggCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAt               >  1:1779937/1‑100 (MQ=255)
                                                                                      gCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAtt              >  2:3200116/1‑100 (MQ=255)
                                                                                      gCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAtt              >  1:3269332/1‑100 (MQ=255)
                                                                                      gCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAtt              >  2:2165561/1‑100 (MQ=255)
                                                                                      gCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCATGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAtt              >  2:230974/1‑100 (MQ=255)
                                                                                          gATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTg          <  2:3578813/100‑1 (MQ=255)
                                                                                          gATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTg          <  1:2285536/100‑1 (MQ=255)
                                                                                          gATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTg          <  1:2952521/100‑1 (MQ=255)
                                                                                           aTGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTgg         <  2:2885334/100‑1 (MQ=255)
                                                                                           aTGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTgg         <  1:3002161/100‑1 (MQ=255)
                                                                                              tACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGCCATTTTTGGttt      >  1:966202/1‑100 (MQ=255)
                                                                                               aCAGCACATCCGGCCCGTGAAATCAGACGCCGATCTTTCTCAACTTCCCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTCGTTTc     >  2:453759/1‑100 (MQ=255)
                                                                                                cAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTcc    >  2:3881675/1‑100 (MQ=255)
                                                                                                  gCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCgg  <  2:1623495/100‑1 (MQ=255)
                                                                                                  gCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCgg  <  2:1558737/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
GATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGG  >  NC_000913/2980647‑2980844

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: