Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,322,700 A→G 15.3% intergenic (‑195/+33) secG ← / ← glmM preprotein translocase membrane subunit/phosphoglucosamine mutase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,322,7000AG15.3% 403.7 / 60.5 171intergenic (‑195/+33)secG/glmMpreprotein translocase membrane subunit/phosphoglucosamine mutase
Reads supporting (aligned to +/- strand):  ref base A (70/74);  new base G (10/16);  total (80/91)
Fisher's exact test for biased strand distribution p-value = 3.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.73e-01

Only 100 of 174 total aligned reads displayed.

AACCAAAGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCC  >  NC_000913/3322601‑3322798
                                                                                                   |                                                                                                   
aaCCAAAGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACa                                                                                                     >  1:2519233/1‑100 (MQ=255)
 aCCAAAGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACaa                                                                                                    >  1:1198643/1‑100 (MQ=255)
   cAAAGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATc                                                                                                  >  1:2044454/1‑100 (MQ=255)
    aaaGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATAAACTGCGGAAAAAAAAAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATcg                                                                                                 >  2:1300652/1‑100 (MQ=255)
     aaGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATcgc                                                                                                <  1:935728/100‑1 (MQ=255)
        cGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATcgccgc                                                                                             >  1:1276637/1‑100 (MQ=255)
         gAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCgccgcc                                                                                            <  1:1975905/100‑1 (MQ=255)
              aCCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCCttttt                                                                                      <  1:3814657/100‑1 (MQ=38)
              aCCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCttttt                                                                                      >  1:503645/1‑100 (MQ=255)
              aCCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCttttt                                                                                      <  1:3792834/100‑1 (MQ=255)
               ccTTCGAAAGACCACTTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCACAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCCttttt                                                                                      <  1:3273444/99‑1 (MQ=37)
               ccTGCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCCtttttt                                                                                     <  2:2359274/100‑2 (MQ=38)
                cTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCCttttttc                                                                                    <  1:724525/100‑3 (MQ=38)
                cTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAg                                                                                    >  1:3259478/1‑100 (MQ=255)
                attCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAGAACAGCAAAACCGCTGTGTTCGCTGAGAAAAACGGCGACAATCGCCGCCTTTTTAg                                                                                    >  2:2562780/2‑100 (MQ=255)
                 ttCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGc                                                                                   >  2:3720730/1‑100 (MQ=255)
                 ttCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGc                                                                                   >  1:879816/1‑100 (MQ=255)
                 ttCGCAAAGACAATTTTATCGCATTGTATCAACTGCAGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGTGATTGTCGCCttttttct                                                                                   <  2:806366/100‑4 (MQ=37)
                  tCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCCttttttctc                                                                                  <  2:2414792/100‑5 (MQ=37)
                  tCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCCttttttctc                                                                                  <  2:3034287/100‑5 (MQ=37)
                  tCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGcc                                                                                  >  2:1987543/1‑100 (MQ=255)
                   cGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGACAAAAGGCGACAATCGCCGCCTTTTTAGcc                                                                                  >  2:1267056/1‑99 (MQ=255)
                   cGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCa                                                                                 >  1:1467230/1‑100 (MQ=255)
                   cGCAAGGGCAATTTTAGCGCATTGTATAAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCCttttttctca                                                                                 <  2:1141756/100‑6 (MQ=25)
                    gCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCCttttttctcag                                                                                <  2:3216198/100‑7 (MQ=37)
                    gCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCCttttttctcag                                                                                <  2:3628856/100‑7 (MQ=37)
                     cAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGt                                                                               <  1:3128936/100‑1 (MQ=255)
                     cAAGAGCAACTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGt                                                                               <  2:3071804/100‑1 (MQ=255)
                      aaGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGtt                                                                              >  1:2928251/1‑100 (MQ=255)
                         ggCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATc                                                                           >  1:1331242/1‑100 (MQ=255)
                          gCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCt                                                                          <  1:2273243/100‑1 (MQ=255)
                            aaTTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTaa                                                                        <  1:1146188/100‑1 (MQ=255)
                            aaTTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTaa                                                                        >  1:1119582/1‑100 (MQ=255)
                               tttATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGc                                                                     <  1:695585/100‑1 (MQ=255)
                                 tATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCtt                                                                   >  2:2917901/1‑100 (MQ=255)
                                 tATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCtt                                                                   <  1:1645852/100‑1 (MQ=255)
                                  aTCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCttt                                                                  <  1:2162045/100‑1 (MQ=255)
                                  aTCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCttt                                                                  >  1:2233005/1‑100 (MQ=255)
                                   tCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTa                                                                 >  2:1576308/1‑100 (MQ=255)
                                    cGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTaa                                                                >  2:2751786/1‑100 (MQ=255)
                                    cGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTaa                                                                <  1:3363056/100‑1 (MQ=255)
                                    cGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTaa                                                                <  2:3244136/100‑1 (MQ=255)
                                    cGCATTGTATCAACTGAGGAAAAAAACAGCAAATCCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTaa                                                                <  1:3941910/100‑1 (MQ=255)
                                      cATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAAc                                                              <  1:1915806/100‑1 (MQ=255)
                                        ttGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACgg                                                            <  1:2180176/100‑1 (MQ=255)
                                            aTCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCttt                                                        >  1:1188127/1‑100 (MQ=255)
                                            aTCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCttt                                                        >  1:2338033/1‑100 (MQ=255)
                                            aTCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTAGCTGAGAAAAAAAGCGCAAAACGCCGCCCTTTAAGCGAGTAATCTAAAGCTATAAACgg                                                            >  2:2490420/1‑96 (MQ=255)
                                              cAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTa                                                      <  1:1974656/100‑1 (MQ=255)
                                               aaCTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTAc                                                     >  1:1698274/1‑100 (MQ=255)
                                               aaCTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTAc                                                     <  2:672689/100‑1 (MQ=255)
                                                aCTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACt                                                    >  2:2970514/1‑100 (MQ=255)
                                                   gCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCa                                                 <  1:717315/100‑1 (MQ=255)
                                                   gCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCa                                                 >  1:3454465/1‑100 (MQ=255)
                                                       aaaaaaaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCgg                                             <  1:1001256/100‑1 (MQ=255)
                                                        aaaaaaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGc                                            <  1:1953598/100‑1 (MQ=255)
                                                        aaaaaaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGc                                            <  2:1900011/100‑1 (MQ=255)
                                                          aaaaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGa                                          <  2:237957/100‑1 (MQ=255)
                                                          aaaaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGa                                          >  2:2213842/1‑100 (MQ=255)
                                                            aaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATg                                        <  2:1197515/100‑1 (MQ=255)
                                                            aaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATg                                        >  2:3140789/1‑100 (MQ=255)
                                                             aCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGCCAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGc                                       <  1:2768313/100‑1 (MQ=255)
                                                              cAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCg                                      >  1:979025/1‑100 (MQ=255)
                                                               aGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCgg                                     >  1:3322041/1‑100 (MQ=255)
                                                                gCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAGCTCTTTAAACGGCTTTTACTGCATCGCCGATGCAgt                                    <  2:1443275/100‑1 (MQ=255)
                                                                gCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGgt                                    >  2:1813235/1‑100 (MQ=255)
                                                                 cAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGgtg                                   <  2:2169534/100‑1 (MQ=255)
                                                                 cAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGgtg                                   <  2:1100881/100‑1 (MQ=255)
                                                                    aaCCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGCCGATGcagtaaaa                                <  1:2650053/100‑8 (MQ=255)
                                                                     aCCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTACACGGCTTTTACTGCATCGGCGATGCGGTGTGCa                               <  2:327096/100‑1 (MQ=255)
                                                                      ccGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCaa                              >  1:2370281/1‑100 (MQ=255)
                                                                        gATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAAt                            <  2:1331233/100‑1 (MQ=255)
                                                                          tgtgTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCAAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTc                          <  2:2518295/100‑1 (MQ=255)
                                                                          tgtgTTCCCTGAGAAAAAAGGCGACAATCGCTGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTc                          <  2:1363829/100‑1 (MQ=255)
                                                                           gtgtTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTc                          <  2:620510/99‑1 (MQ=255)
                                                                           gtgtTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCa                         <  2:784515/100‑1 (MQ=255)
                                                                            tgtTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAg                        >  1:3506007/1‑100 (MQ=255)
                                                                            tgtTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAg                        <  2:2828777/100‑1 (MQ=255)
                                                                            tgtTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAg                        <  1:583083/100‑1 (MQ=255)
                                                                             gtTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGt                       <  1:130470/100‑1 (MQ=255)
                                                                                cGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTCATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCAc                    <  2:3009011/100‑1 (MQ=255)
                                                                                 gCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCAcc                   >  2:2682427/1‑100 (MQ=255)
                                                                                  cTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCt                  >  1:2577284/1‑100 (MQ=255)
                                                                                   tGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTg                 >  2:3850129/1‑100 (MQ=255)
                                                                                    ggctaaaaaGGCGGCGATTGTCGCCTTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTg                 >  1:3544193/5‑100 (MQ=25)
                                                                                    ggctaaaaaGGCGGCGATTGTCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTgc                >  1:134089/5‑100 (MQ=37)
                                                                                     gctaaaaaGGCGGCGATTGTCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCCATGCGGTGTGCAAATTCAGTCACCTgc                >  2:27612/4‑99 (MQ=37)
                                                                                     agaAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCACATTCAGTCACCTgcg               >  1:3891568/1‑100 (MQ=255)
                                                                                     agaAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTgc                >  2:2048653/1‑99 (MQ=255)
                                                                                     agaAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGGTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTgcg               >  1:3325252/1‑100 (MQ=255)
                                                                                       aaaaaaGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCt             >  1:3788822/1‑100 (MQ=255)
                                                                                        aaaaaGGCGGCGATTGTCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCtt            >  1:996756/1‑100 (MQ=38)
                                                                                        aaaaaGGCGGCGATTGTCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCtt            >  1:3084662/1‑100 (MQ=38)
                                                                                          aaaGGCGGCGATTGTCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCg          >  1:1000643/1‑100 (MQ=255)
                                                                                             ggCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCt       >  1:3652066/1‑100 (MQ=255)
                                                                                               cGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGTATCGGCGATGCGGTGTGCAGATTCAGTAACCTGCGCTTCGtgtg      >  2:3577300/1‑96 (MQ=255)
                                                                                                gACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCg    >  1:3039946/1‑100 (MQ=255)
                                                                                                gACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCg    <  1:616868/100‑1 (MQ=255)
                                                                                                  cAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGcc  >  2:1628179/1‑100 (MQ=255)
                                                                                                  cAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGcc  >  1:986007/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AACCAAAGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCCTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCC  >  NC_000913/3322601‑3322798

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: