| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,352,539 | C→T | 17.1% | A163T (GCT→ACT) | arcB ← | aerobic respiration control sensor histidine protein kinase, cognate to two‑component response regulators ArcA and RssB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,352,539 | 0 | C | T | 17.1% | 331.9 / 52.7 | 142 | A163T (GCT→ACT) | arcB | aerobic respiration control sensor histidine protein kinase, cognate to two‑component response regulators ArcA and RssB |
| Reads supporting (aligned to +/- strand): ref base C (61/55); new base T (14/10); total (77/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.73e-01 | |||||||||||
Only 100 of 144 total aligned reads displayed.
CAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTG > NC_000913/3352441‑3352638 | cAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCa > 1:3281444/1‑100 (MQ=255)cAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCa > 1:3507065/1‑100 (MQ=255) aGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCAt > 1:1844906/1‑100 (MQ=255) gttgttTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGTATc < 2:609787/100‑1 (MQ=255) gttgttTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATc > 1:963823/1‑100 (MQ=255) ttgttTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCa < 1:1137321/100‑1 (MQ=255) tgttTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGTATCaa < 1:53767/100‑1 (MQ=255) gttTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaag < 1:2266280/100‑1 (MQ=255) tttttCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTGATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaagg < 2:1192196/100‑1 (MQ=255) ttttCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaagga > 1:1791966/1‑100 (MQ=255) tttCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACCGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaaggaa > 2:435408/1‑100 (MQ=255) tttCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGGATCaagga > 2:927586/1‑99 (MQ=255) ttCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGTATCaaggaag > 1:136124/1‑100 (MQ=255) ttCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaaggaag < 2:2269127/100‑1 (MQ=255) ttCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaaggaag < 2:1326831/100‑1 (MQ=255) ttCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaaggaag < 1:1501248/100‑1 (MQ=255) ttCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaaggaag > 2:530985/1‑100 (MQ=255) tCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaaggaagg < 1:2292090/100‑1 (MQ=255) cGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaaggaag < 2:836923/98‑1 (MQ=255) gCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAACAGCAGGTCGGAGGAAGTATAAAggagggaa > 2:2171651/1‑100 (MQ=255) gCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAggaaggaa > 1:1610556/1‑100 (MQ=255) cTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAAc > 1:666014/1‑100 (MQ=255) cTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAAc > 2:943288/1‑100 (MQ=255) cTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAAc > 1:1774529/1‑100 (MQ=255) tttCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTa < 2:2469285/100‑1 (MQ=255) tttCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTa < 1:2161927/100‑1 (MQ=255) tCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTatg < 1:2659476/100‑3 (MQ=255) tCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAg > 1:2830549/1‑100 (MQ=255) ccGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGTATCAAGGAAGGAACGTAAGa > 2:3482347/1‑100 (MQ=255) cGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGTATCAAGGAAGGAACGTAAGaa > 2:3073387/1‑100 (MQ=255) cGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGaa > 1:3632325/1‑100 (MQ=255) cGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGaa < 2:2512623/100‑1 (MQ=255) cagcagCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAg < 2:3870396/100‑1 (MQ=255) agcagcTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAgg > 2:1338679/1‑100 (MQ=255) gcagcTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGa > 2:2898769/1‑100 (MQ=255) gcagcTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGa > 2:2885341/1‑100 (MQ=255) gcagcTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGa > 1:2199084/1‑100 (MQ=255) gcagcTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGa < 1:2937979/100‑1 (MQ=255) gcagcTCCATCGCGCGGCTACAGCCGAAAAACTCTTTATCTTAGTTACGATAAAAAACCAAATCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAgg > 2:375423/1‑99 (MQ=255) agcTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGAtt > 2:1452897/1‑100 (MQ=255) agcTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGAtt < 2:1610547/100‑1 (MQ=255) gcTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATtg > 1:24264/1‑100 (MQ=255) cTCCATCGCGCGGTTACAGCCGGAAAACTTTTTATCAAAAAAAAAAAAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATtgc < 2:1972432/100‑1 (MQ=255) cTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGTATCAAGGAAGGAACGTAAGAATGAGGATtgc < 1:3073407/100‑1 (MQ=255) cTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGTATCAAGGAAGGAACGTAAGAATGAGGATtgc < 1:709675/100‑1 (MQ=255) cTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATtgc < 2:716153/100‑1 (MQ=255) cTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATtgc < 1:2702329/100‑1 (MQ=255) tCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATtgct > 2:3189045/1‑100 (MQ=255) ccATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATtgctg > 1:3088223/1‑100 (MQ=255) ccATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTAACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATtgctg < 2:2366083/100‑1 (MQ=255) acATCGCACGGTTACAGCCGGAAAACTCTTTATCTTCGTAACGATAAAAAACCAGGACAGGTAAAACATCAAGGAAGGAACGTAAGAATGAGGaat > 2:728165/2‑94 (MQ=255) aTCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTgctgct < 2:187952/100‑1 (MQ=255) gcgcgGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGa < 1:3574019/100‑1 (MQ=255) gcgcgGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGa > 1:1979434/1‑100 (MQ=255) gcgcgGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGa > 1:3091221/1‑100 (MQ=255) cgcgGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAg > 1:981538/1‑100 (MQ=255) cgGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGTATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCt > 2:178752/1‑100 (MQ=255) cgGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCt < 2:3717520/100‑1 (MQ=255) ggTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTg < 1:1394249/100‑1 (MQ=255) gTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGa > 2:3789215/1‑100 (MQ=255) ttACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGaa < 2:1974445/100‑1 (MQ=255) tACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAAt < 1:3795269/100‑1 (MQ=255) aCAGCCGGAAAACTCTTTATCGTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAAt < 2:387663/99‑1 (MQ=255) cAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAAttt > 1:2933431/1‑100 (MQ=255) aGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTtg < 1:117434/100‑1 (MQ=255) gCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTtgt > 1:1360981/1‑100 (MQ=255) ccGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGTATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTtgtg > 1:218306/1‑100 (MQ=255) ccGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTtgtg < 1:2432189/100‑1 (MQ=255) ccGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTtgtg < 2:897696/100‑1 (MQ=255) ccGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTtgtg < 1:1452906/100‑1 (MQ=255) ccGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTtgtg < 1:3337220/100‑1 (MQ=255) ccGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTtgtg < 1:3502795/100‑1 (MQ=255) ccGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTtgtg < 2:357020/100‑1 (MQ=255) cGGAAAACGCTTTATCTTCGTTACGATAAAAAACCCGGGCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTtgtg < 2:3123041/99‑1 (MQ=255) ggAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGTATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTAAATTTGTGtc > 1:2347484/1‑100 (MQ=255) ggAAAACTCTTGATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGTATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTgtgtn < 2:2107340/100‑2 (MQ=255) tctTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTcgc < 1:3189766/100‑1 (MQ=255) ctTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGTATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTcgcg > 1:2365036/1‑100 (MQ=255) ctTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTcgcg > 2:842436/1‑100 (MQ=255) ctTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTcgcg > 1:1985870/1‑100 (MQ=255) ttATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATTAAGGAAGGAACGTAAGAATGAGGGTTGCTGCTCGAGCTGAATTTGTGTCTCTTggcg > 2:3861067/1‑98 (MQ=255) cTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGAAAGAATGAGGATTGCTGCTCGAGCGGAATTTGTGTCTCTTCGCGCTCtt > 2:2471690/1‑99 (MQ=255) tCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGa < 1:371853/100‑1 (MQ=255) cGTTACGATAAAAAACCAGGTCGGGTGAAGTATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGAt < 1:1419373/100‑1 (MQ=255) gTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGAtt < 1:421312/100‑1 (MQ=255) ttACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGAttt > 1:3625084/1‑100 (MQ=255) tACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTc < 2:3091201/100‑1 (MQ=255) tACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTc > 1:3908185/1‑100 (MQ=255) cGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCaa > 2:3897425/1‑100 (MQ=255) aTAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGGCTCTTCGCGCTCTTTGATTTCAAtt > 1:783906/1‑100 (MQ=255) tAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAAttt > 1:2579096/1‑100 (MQ=255) aaaaaCCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTc < 1:530988/100‑1 (MQ=255) aCCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGtt > 1:3225653/1‑100 (MQ=255) ccAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTg < 2:905235/100‑1 (MQ=255) ccAGGTCGGGTGAAGCATCAAGGAAGGAACATAGGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTg > 2:2591559/1‑100 (MQ=255) cAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTgg > 1:1838147/1‑100 (MQ=255) aaGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTc < 2:1230065/100‑1 (MQ=255) aGCATCGAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTcc < 2:3624563/100‑1 (MQ=255) aGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTcc < 1:126741/100‑1 (MQ=255) cATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTGGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTg > 1:2777575/1‑100 (MQ=255) | CAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCTCGAGCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTG > NC_000913/3352441‑3352638 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |