| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,088,091 | G→C | 16.9% | intergenic (+34/+16) | yiiG → / ← frvR | DUF3829 family lipoprotein/putative frv operon regulator; contains a PTS EIIA domain |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,088,091 | 0 | G | C | 16.9% | 382.0 / 73.2 | 153 | intergenic (+34/+16) | yiiG/frvR | DUF3829 family lipoprotein/putative frv operon regulator; contains a PTS EIIA domain |
| Reads supporting (aligned to +/- strand): ref base G (67/60); new base C (13/13); total (80/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.79e-01 | |||||||||||
Only 100 of 173 total aligned reads displayed.
ACTCTTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCT > NC_000913/4087993‑4088190 | aCTCTTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATgcggc < 1:2965696/100‑1 (MQ=255) ctctTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTTATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATgcggc > 2:317466/1‑99 (MQ=255) ctctTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATgcggcg < 1:537633/100‑1 (MQ=255) ctctTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATgcggcg > 1:3824177/1‑100 (MQ=255) ctctTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATgcggcg > 1:1949493/1‑100 (MQ=255) ctctTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATgcggcg < 2:2068018/100‑1 (MQ=255) ctctTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATgcggc < 2:1241202/99‑1 (MQ=255) ctctTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATgcgccg < 1:2168779/100‑1 (MQ=255) ctctTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATgcgccg < 1:3462360/100‑1 (MQ=255) ntttCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGgcgc > 2:614828/2‑99 (MQ=255) ctTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCa < 1:890377/100‑1 (MQ=255) tCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATcc < 2:177021/100‑1 (MQ=255) tCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATcc < 1:371361/100‑1 (MQ=255) tCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATcc > 1:3531863/1‑100 (MQ=255) cccGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCg > 2:974054/1‑100 (MQ=255) cccGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGCCGCATCCg > 1:2013696/1‑100 (MQ=255) ccGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCg > 2:1605580/1‑99 (MQ=255) ccGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGa < 2:2866679/100‑1 (MQ=255) ccGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGa > 1:3554692/1‑100 (MQ=255) cGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGac < 1:1068484/100‑1 (MQ=255) cGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGCCGCATCCGac < 2:3872579/100‑1 (MQ=255) cGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGCCGCATCCGac < 1:30514/100‑1 (MQ=255) cGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGCCGCATCCGac < 2:2316904/100‑1 (MQ=255) gagaGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGCCGCATCCGaca < 1:705269/100‑1 (MQ=255) gagaGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGCCGCATCCGac < 2:2614992/99‑1 (MQ=255) agagCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGCCGCATCCGacac < 1:1412618/100‑1 (MQ=255) agagCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGCCGCATCCGacac < 2:2013686/100‑1 (MQ=255) aaagCATGACGCGAGTACAACGACATGGTTTATGACTATAATAGCCTTCTTTAAACGTTGTTGCGGATAAATGCAGTGTCTGATgccgcg > 2:1311283/3‑90 (MQ=255) gCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGt < 2:3914440/100‑1 (MQ=255) cATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGtt > 2:2513598/1‑100 (MQ=255) cATTACACGAGTACAACGAAATTGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGt < 2:3531837/99‑1 (MQ=255) tACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCAc < 1:1436978/100‑1 (MQ=255) tACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCAc > 1:390310/1‑100 (MQ=255) aCGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCAcc < 2:1593246/100‑1 (MQ=255) cgcgAGTACAACGAAATGGTTGATGACTAAAAGAGCCCGCGTTAAACGTGTTTGAGGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCAc < 2:3568199/98‑1 (MQ=255) gcgAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCAcc > 1:791361/1‑98 (MQ=255) aGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTtg < 2:1377494/100‑1 (MQ=255) aGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTtg > 1:3408132/1‑100 (MQ=255) aGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCAGATGCGGCACATCCGACACAGTTCACCCCtt > 2:3523809/1‑99 (MQ=255) gTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATACATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTtgt < 2:300753/100‑1 (MQ=255) gTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTtgt > 1:3694243/1‑100 (MQ=255) aCAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGa < 2:672512/100‑1 (MQ=255) aCAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGAAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGa > 1:2614763/1‑100 (MQ=255) cAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGCTGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGaa > 2:2195290/1‑100 (MQ=255) cAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGaa > 1:2633007/1‑100 (MQ=255) aaCGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAg < 2:3694215/100‑1 (MQ=255) aaCGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAg > 2:3428023/1‑100 (MQ=255) aaTGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACt < 1:2333494/100‑1 (MQ=255) gatgaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATaaa > 2:2692806/1‑100 (MQ=255) gatgaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATaaa > 1:724435/1‑100 (MQ=255) aCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGcc > 1:649187/1‑100 (MQ=255) aCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGcc > 1:650075/1‑100 (MQ=255) aCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGcc > 1:1715894/1‑100 (MQ=255) tataATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTc < 1:3335708/100‑1 (MQ=255) ataataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCa > 1:1962171/1‑100 (MQ=255) ataataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCa < 2:1538391/100‑1 (MQ=255) taataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCat > 2:1915953/1‑100 (MQ=255) gCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCt > 1:489309/1‑100 (MQ=255) ccTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTg > 1:1243848/1‑100 (MQ=255) tGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGtt < 2:1447129/100‑1 (MQ=255) cGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTaa > 2:1084537/1‑100 (MQ=255) gTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAc > 1:2307920/1‑100 (MQ=255) ttAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAcc > 1:3204372/1‑100 (MQ=255) tAAACGTTTTTGATGCTAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAccc > 2:507886/1‑100 (MQ=255) aaaCGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCg < 2:3077837/100‑1 (MQ=255) aaCGTTTTTGATTATAAATGCAGTGTCGGATGCGGCGCATCCGAGACAGTTCACCCCTTGGGAAGTAACTCCATAGATGCCTCATATCCTGTCAACCCgg < 2:1117938/100‑1 (MQ=255) aCGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGc < 2:3249162/100‑1 (MQ=255) aCGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGc < 2:2260258/100‑1 (MQ=255) cGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCa > 2:2821864/1‑100 (MQ=255) tttttGATGATAAATGCAGTGTCGGATGCGGCGCATCCGCCACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAcc < 1:3120487/93‑1 (MQ=255) tttttGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaat < 1:2692823/100‑1 (MQ=255) ttttGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaata < 1:3685436/100‑1 (MQ=255) tttGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaataa > 1:1820861/1‑100 (MQ=255) ttGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATACCTCATATCCTGTTAACCCGGCaataa > 1:295610/1‑99 (MQ=255) ttGATGATAAATGCAGTGTCGGATGCAGTCCATCCTACACAGTTCACCCCTTTTGAAGTACCTCCATAAATTCCTCATATCCTGTTAACCCGGCaataa < 2:3511623/99‑1 (MQ=255) gatgatAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtct > 1:2707117/1‑100 (MQ=255) gatAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTccg > 1:2191736/1‑100 (MQ=255) gatAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTcc > 2:525717/1‑99 (MQ=255) tAAATGCAGTGTCTGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTccgcc > 2:2444236/1‑100 (MQ=255) aaTGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCgg < 1:883907/100‑1 (MQ=255) gaactgtgtCGGATGCGCCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGa > 1:102089/6‑100 (MQ=255) aTGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGa > 2:2015242/1‑100 (MQ=255) tGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAt < 1:3893665/100‑1 (MQ=255) gCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATg > 2:2862966/1‑100 (MQ=255) aGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAATTGCCTCATATCCTGCTAACCCGGCAATAATCTCCGCCGGATGCt < 2:1435657/100‑1 (MQ=255) gtgtCGGATGCGCCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTg > 2:66831/1‑100 (MQ=255) gtgtCGGATGCGCCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGACAATAATCTCCGCCGGATGCTg > 1:2420241/1‑100 (MQ=255) tgtCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGa > 1:2507400/1‑100 (MQ=255) tgtCGGATGCGCCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGa > 1:1666179/1‑100 (MQ=255) tgtCGGATGCGCCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGa > 1:54892/1‑100 (MQ=255) gtCGGCTGCGCCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCAGATGc > 2:877923/1‑96 (MQ=255) tCGGATGTGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGaca < 2:3675984/100‑1 (MQ=255) tCGGATGCGCCGCATCCGACACAGTTCACCCCTTGTGAAGGAACTGCAGAAATGCCTCATGTCCTGTGAACCCGGCAATAATCTCCGCCGGATGCTGac > 1:179426/1‑99 (MQ=255) cGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGacac > 2:438623/1‑100 (MQ=255) ggATGCGCCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGAcaca > 1:3643366/1‑100 (MQ=255) gATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACaa < 1:1506243/100‑1 (MQ=255) tGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAata > 1:222308/1‑100 (MQ=255) gcgccgCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTAATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGGCACAatat < 2:11655/100‑1 (MQ=255) gcgcATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCt > 1:204926/1‑100 (MQ=255) gcgcATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCt > 1:1163343/1‑100 (MQ=255) | ACTCTTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCT > NC_000913/4087993‑4088190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |