| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,196,331 | C→G | 100% | intergenic (‑232/+1) | thiC ← / ← rsd | phosphomethylpyrimidine synthase/stationary phase protein, binds sigma 70 RNA polymerase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,196,331 | 0 | C | G | 95.6% | 627.5 / 13.2 | 180 | intergenic (‑232/+1) | thiC/rsd | phosphomethylpyrimidine synthase/stationary phase protein, binds sigma 70 RNA polymerase subunit |
| Reads supporting (aligned to +/- strand): ref base C (4/4); new base G (82/90); total (86/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 181 total aligned reads displayed.
GATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTCAG > NC_000913/4196232‑4196426 | gATCCCGAATAAACGGTCTCAGCCAGTTAAGGTACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAc < 1:53104/100‑1 (MQ=255) cccGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCa < 2:3707594/100‑1 (MQ=255) ccGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCaa > 1:1544689/1‑100 (MQ=255) ccGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCaa > 1:1498988/1‑100 (MQ=255) cGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAg < 1:2784978/100‑1 (MQ=255) cGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAg > 1:1129949/1‑100 (MQ=255) cGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAg < 2:1722565/100‑1 (MQ=255) aaaCGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGa > 2:1990260/1‑100 (MQ=255) aaaCGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGa < 2:85090/100‑1 (MQ=255) aaCGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGAt > 1:2756734/1‑100 (MQ=255) aaCGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGAt > 1:3641550/1‑100 (MQ=255) cGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGt < 1:2346722/100‑1 (MQ=255) cGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGt < 2:3776963/100‑1 (MQ=255) gTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGttt < 1:3650400/100‑1 (MQ=255) ctcAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGa < 1:1268519/100‑1 (MQ=255) tcAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGAc > 1:3126014/1‑100 (MQ=255) cAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGAcg > 2:1438923/1‑100 (MQ=255) gCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGAcgcg > 2:2952216/1‑100 (MQ=255) aGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATGACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACgcgggc < 2:1691015/100‑1 (MQ=255) aGTTAAGACAGTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGCAGTCAAGCAGGATGTTTGACgcggg > 2:2776491/1‑99 (MQ=255) gTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACgcgggcg < 1:2989424/100‑1 (MQ=255) gTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACgcgggcg < 1:2330858/100‑1 (MQ=255) ttAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACgcgggcgg < 2:3601688/100‑1 (MQ=255) tAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGggcggc > 2:1649082/1‑100 (MQ=255) ctggCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGgcggcg < 1:2296386/98‑1 (MQ=255) aaGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGgcggcg < 2:1879550/100‑1 (MQ=255) aGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGgcggcg > 2:2230120/1‑99 (MQ=255) aGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGt > 2:1255181/1‑100 (MQ=255) aGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGt < 1:2237675/100‑1 (MQ=255) aGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCGt < 1:1361555/100‑1 (MQ=255) ggCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGt > 1:3734541/1‑99 (MQ=255) ggCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTc > 2:3196504/1‑100 (MQ=255) gCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCa < 1:2892152/100‑1 (MQ=255) gCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCa > 1:2176985/1‑100 (MQ=255) cACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCaa > 1:1159133/1‑100 (MQ=255) cACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCCGCCCGCGTCaa < 1:3327968/100‑1 (MQ=255) aCTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCCGCCCGCGTCaaa < 1:349206/100‑2 (MQ=255) cTCCGACAAGAAATTAGCCCCGCAAATGGGGCATCGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGTCGGTGTCAAGc < 2:2068576/100‑1 (MQ=255) tCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCa < 1:2952234/100‑1 (MQ=255) tCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCCGCCCGCGTCAAACa < 1:1416937/100‑1 (MQ=255) ccGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCAc > 1:2308076/1‑100 (MQ=255) ccGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCCGCCCGCGTCAAACat < 1:2013730/100‑2 (MQ=255) ccGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCCGCCCGCGTCAAACat < 1:3457805/100‑2 (MQ=255) ccGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGCTTGACGCCGCCCGCGTCAAACat < 2:3347065/100‑2 (MQ=38) cGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCGAGCAcc < 2:2850780/100‑1 (MQ=255) gACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACca > 1:3597371/1‑100 (MQ=255) aCAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACcag < 2:3156309/100‑1 (MQ=255) aCAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCCGCCCGCGTCaaacatcct < 1:1214745/100‑8 (MQ=37) cAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACcagc > 1:3757256/1‑100 (MQ=255) cAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACcagc > 2:1500156/1‑100 (MQ=255) aaGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACcagca < 2:907379/100‑1 (MQ=255) nttAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATc > 1:1895048/2‑100 (MQ=255) ttAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCa < 1:2975338/100‑1 (MQ=255) aGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGc < 1:2204763/100‑1 (MQ=255) gCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGc < 2:3397825/99‑1 (MQ=255) gCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCt > 1:1107230/1‑100 (MQ=255) gCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCt < 1:2494088/100‑1 (MQ=255) gCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCt > 1:1424071/1‑100 (MQ=255) cccGCAAATGGGGGATTGAATGTAAATTACGCGTTAACCGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTa > 2:2432585/1‑100 (MQ=255) cccGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTa > 1:272285/1‑100 (MQ=255) cccGCAAATGGGGCATTGAATGTAAATTACGCGTAAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTa > 1:1488077/1‑100 (MQ=255) gCAAATGGGGCGTTGAATGTAAATTACGAGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATcg < 2:882436/100‑2 (MQ=255) aaaTGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTc < 1:1698295/100‑1 (MQ=255) ggggCATTGAATGTAACTTACGCGTTAACAGCGCAGAAGTAGAGCAGGATGTTTGAAGCGGGCCGCGTCAAGCCCCAACAGAATCAGCTTATCTTACAGc < 2:2299773/100‑1 (MQ=255) ggggCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCatc < 1:2659001/100‑3 (MQ=255) gggCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGca < 1:2085059/100‑1 (MQ=255) ggCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGcac > 2:232499/1‑100 (MQ=255) cATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGcaca > 1:1729369/1‑99 (MQ=255) tGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgc < 1:1070889/100‑1 (MQ=255) aaTGTAAATTACGTGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgc < 2:3188247/100‑1 (MQ=255) aaTGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgc > 2:3358798/1‑100 (MQ=255) aTGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgcg > 2:816620/1‑100 (MQ=255) aTGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgcg > 1:3813643/1‑100 (MQ=255) aTGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgcg > 2:1712597/1‑100 (MQ=255) aTGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgc > 2:2996125/1‑99 (MQ=255) tGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgcgc > 1:795763/1‑100 (MQ=255) gTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCt > 2:974561/1‑100 (MQ=255) tAAATTACGCGTTAACAGCGCATAAGTCAAGCAGGATTTTTGACGCGGACGGCGTCAAGCACCAGGAGAATGAGCTTATCTTCCAGCACAAAGCGCGCtt > 2:1928909/1‑100 (MQ=255) tAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCtt > 2:1904769/1‑100 (MQ=255) tAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCtt > 2:74713/1‑100 (MQ=255) aaTTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTcc < 2:187244/100‑1 (MQ=255) aCGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAgcg < 1:761466/100‑1 (MQ=255) cgTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCt > 2:1771983/1‑100 (MQ=255) cgTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCt > 1:2994144/1‑100 (MQ=255) ttAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCg < 1:2869462/100‑1 (MQ=255) aaCAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGcc < 2:1725930/100‑1 (MQ=255) aCAGCGCAGAAGTCAAGCAGGATGTTTAACGCGGGAGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAACGAGCTTCCAGCGCCTCGc > 2:43379/1‑98 (MQ=255) aGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGAt > 1:1310954/1‑100 (MQ=255) gcgcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATg < 2:809017/100‑1 (MQ=255) gcgcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATg > 1:2126213/1‑100 (MQ=255) gagcAGAACTCCAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATg < 1:3547495/98‑1 (MQ=255) cgcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGt < 1:957908/100‑1 (MQ=255) gcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTc > 2:3521158/1‑100 (MQ=255) gcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTc < 1:3385075/100‑1 (MQ=255) gcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTc < 2:3676085/100‑1 (MQ=255) gcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTc > 1:3255796/1‑100 (MQ=255) gcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTc < 2:1786700/100‑1 (MQ=255) cAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTCa < 1:15837/100‑1 (MQ=255) aGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTCAg < 1:722570/100‑1 (MQ=255) aGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTCAg < 2:652337/100‑1 (MQ=255) | GATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTCAG > NC_000913/4196232‑4196426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |