Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,032,336 G→C 17.2% intergenic (‑19/+48) dcm ← / ← yedJ DNA cytosine methyltransferase/putative HD superfamily phosphohydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,032,3360GC17.2% 412.4 / 81.2 163intergenic (‑19/+48)dcm/yedJDNA cytosine methyltransferase/putative HD superfamily phosphohydrolase
Reads supporting (aligned to +/- strand):  ref base G (67/68);  new base C (13/15);  total (80/83)
Fisher's exact test for biased strand distribution p-value = 8.37e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.19e-01

Only 100 of 173 total aligned reads displayed.

AATTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGACACCTTCATTC  >  NC_000913/2032237‑2032435
                                                                                                   |                                                                                                   
aaTTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATATCACCGGCCATCTg                                                                                                     >  2:3162893/1‑100 (MQ=255)
 aTTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTga                                                                                                    <  1:3895795/100‑1 (MQ=255)
 aTTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTga                                                                                                    >  1:3680739/1‑100 (MQ=255)
     gcagcaGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATg                                                                                                >  1:2753181/1‑100 (MQ=255)
      cagcagTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATgg                                                                                               <  2:2343786/100‑1 (MQ=255)
       agcagTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGc                                                                                              >  2:2243867/1‑100 (MQ=255)
       agcagTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGc                                                                                              <  1:2379250/100‑1 (MQ=255)
        gcagTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGcc                                                                                             >  2:3430271/1‑100 (MQ=255)
         cagTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCg                                                                                            <  2:3865191/100‑1 (MQ=255)
           gTTTCTCCAGCATTGCCTGGGCGGCATTCCCGGTGCTGTATGAATCGGTGACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCgg                                                                                           <  1:279570/99‑2 (MQ=255)
            tttCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCggtg                                                                                         <  1:929683/100‑4 (MQ=255)
            tttCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCggtg                                                                                         <  2:3707226/100‑4 (MQ=255)
             ttCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCggtga                                                                                        <  2:305464/100‑5 (MQ=255)
             ttCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCggtga                                                                                        <  1:3557285/100‑5 (MQ=255)
             ttCTCAAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCggtga                                                                                        <  2:2574452/100‑5 (MQ=255)
              tctcCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAgg                                                                                       >  1:3056636/1‑100 (MQ=255)
              tctcCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAgg                                                                                       >  1:991635/1‑100 (MQ=255)
               ctcCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGt                                                                                      <  2:3104384/100‑1 (MQ=255)
               ctcCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCggtgaaa                                                                                      <  1:3199359/100‑7 (MQ=255)
                 ccAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGtaa                                                                                    >  1:1139377/1‑98 (MQ=255)
                 ccAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTa                                                                                    <  2:2750701/100‑1 (MQ=255)
                 ccAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTa                                                                                    <  2:734885/100‑1 (MQ=255)
                  cAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTaa                                                                                   <  1:3723959/100‑1 (MQ=255)
                  cAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTaa                                                                                   >  2:1708206/1‑100 (MQ=255)
                  cAGCATTGCCTGTGCGGCATTCCCGGTGCTCTACGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCAGACAGGTTaa                                                                                   >  2:2597822/1‑100 (MQ=255)
                   aGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAAc                                                                                  <  2:1794857/100‑1 (MQ=255)
                       ttGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATaa                                                                              <  2:1998891/100‑1 (MQ=255)
                        tGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATaa                                                                              <  1:256775/99‑1 (MQ=255)
                         gCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAAtt                                                                            <  1:3113486/100‑1 (MQ=255)
                         gCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAAtt                                                                            >  2:3035498/1‑100 (MQ=255)
                         gCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAAtt                                                                            >  1:3404478/1‑100 (MQ=255)
                            tgtgCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACa                                                                         >  2:2675572/1‑100 (MQ=255)
                             gtgCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAg                                                                        <  2:3942633/100‑1 (MQ=255)
                              tgCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGc                                                                       <  1:1650605/100‑1 (MQ=255)
                               gCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGcc                                                                      >  2:1528881/1‑100 (MQ=255)
                               gCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGcc                                                                      <  1:1444844/100‑1 (MQ=255)
                               gCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGcc                                                                      >  2:2446322/1‑100 (MQ=255)
                                cGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATGTCACCGGCCATATGAGATGGCCGACAGGGTAACATAATTACAGCCa                                                                     >  2:1440329/1‑100 (MQ=255)
                                   cATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCAttt                                                                  <  1:2817058/100‑1 (MQ=255)
                                      tCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAgg                                                               <  1:3466251/100‑1 (MQ=255)
                                       cccGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAggg                                                              >  1:1876021/1‑100 (MQ=255)
                                       cccGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAggg                                                              <  1:1629099/100‑1 (MQ=255)
                                       cccGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAgg                                                               <  2:2796827/99‑1 (MQ=255)
                                        ccGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGc                                                             <  2:3267822/100‑1 (MQ=255)
                                         cGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCTGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGcc                                                            <  1:2928964/100‑1 (MQ=255)
                                            tGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCAcg                                                         <  1:1552869/100‑1 (MQ=255)
                                             gCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCGGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGTCAAcgc                                                        >  2:182565/1‑100 (MQ=255)
                                              cTGTATGAATCGGTTACTTATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCAcgcg                                                       <  2:2469229/100‑1 (MQ=255)
                                               tGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACgcgc                                                      >  1:273591/1‑100 (MQ=255)
                                                gTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCt                                                     >  2:795756/1‑100 (MQ=255)
                                                gTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCt                                                     >  2:1008992/1‑100 (MQ=255)
                                                 tATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTc                                                    <  1:3224362/100‑1 (MQ=255)
                                                  aTGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTca                                                   >  1:2510245/1‑100 (MQ=255)
                                                    gAATCTGTGACAGATATCTTTTCCTGCATAGATTTCCCCGCCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGTCCACGCGCTcagc                                                 <  2:1001180/100‑1 (MQ=255)
                                                    gAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTcagc                                                 >  1:395912/1‑100 (MQ=255)
                                                     aaTCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTcagcc                                                >  1:258349/1‑100 (MQ=255)
                                                     aaTCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTcagcc                                                <  2:1298571/100‑1 (MQ=255)
                                                      aTCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTcagcca                                               >  1:2172364/1‑100 (MQ=255)
                                                          gTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCgg                                           <  1:1084820/100‑1 (MQ=255)
                                                          gTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCgg                                           <  1:3818428/100‑1 (MQ=255)
                                                          gTTACTCATATATTGCCCTACATATATTTCACCGGCAACCTGAGATGGCCGACAGGTTAACATACTTACAGCCATTTATTTCCACGCTCCCAGCCAGCg                                            <  2:207642/99‑1 (MQ=255)
                                                            tACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGAt                                         <  1:745170/100‑1 (MQ=255)
                                                                gATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGaaa                                     >  1:956327/1‑100 (MQ=255)
                                                                 atatatTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATATTTACAGCCATATAGGGCCACGCGCTCAGCCAGCGGATGaata                                    <  1:2667656/100‑3 (MQ=255)
                                                                 atatatGTGCCTGCATAGATTTCCGCGGCCATCTGAGCAGGCAGACAGGTTAACATAATTACAGCGATTTAGGGCCACGCTCTCAGCCAGCGGATGaaaa                                    <  2:963334/100‑1 (MQ=255)
                                                                  tatatTTTCCTGCATAGATTTCACCTGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAAc                                   <  2:3649841/100‑1 (MQ=255)
                                                                   atatTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACg                                  >  2:352960/1‑100 (MQ=255)
                                                                    tatTTTCCTGAATAGATTTCACCGCACATCTGAGATGGCCGACAGGTTAACATAATTAAAGCCATTTAGGGACACGCGCTCAGCCATCGAATGAAAACGc                                 >  2:405949/1‑100 (MQ=255)
                                                                     atTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCa                                <  1:2558661/100‑1 (MQ=255)
                                                                     atTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCa                                >  2:2831117/1‑100 (MQ=255)
                                                                      ttttCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCAt                               <  2:2753164/100‑1 (MQ=255)
                                                                           cTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATc                          >  1:3152625/1‑100 (MQ=255)
                                                                            tGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCa                         <  1:1834596/100‑1 (MQ=255)
                                                                            tGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCa                         >  2:317552/1‑100 (MQ=255)
                                                                             gCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCAc                        >  1:1423720/1‑100 (MQ=255)
                                                                             gCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCAc                        >  2:1188553/1‑100 (MQ=255)
                                                                              cATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCAcc                       >  2:19147/1‑100 (MQ=255)
                                                                               aTAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCt                      <  1:2575715/100‑1 (MQ=255)
                                                                                tAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCtt                     >  1:2334984/1‑100 (MQ=255)
                                                                                gttaacctgtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCtt                     >  1:2253970/11‑100 (MQ=38)
                                                                                 aGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTtg                    <  1:4449/100‑1 (MQ=255)
                                                                                  gATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTtgt                   >  2:691866/1‑100 (MQ=255)
                                                                                   aTTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTtgtg                  <  2:3229384/100‑1 (MQ=255)
                                                                                   aTTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTtgtg                  >  1:930304/1‑100 (MQ=255)
                                                                                    tttCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCAAGCGGATGAAAACGCATCTATCACCTTGTGa                 >  2:2673748/1‑100 (MQ=255)
                                                                                     cctgtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCGCTTTAGGGCCACGCGCTCAGCCAGCTGATGAAAACGCGTCTATCACCGTGTGa                 >  2:1546690/6‑99 (MQ=255)
                                                                                     cctgtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGAt                >  1:3315432/6‑100 (MQ=255)
                                                                                     cctgtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGAt                >  1:627394/6‑100 (MQ=255)
                                                                                     cctgtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGAt                >  1:2049513/6‑100 (MQ=255)
                                                                                       tgtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCg              >  2:2731551/4‑100 (MQ=255)
                                                                                       cACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCg              >  2:1253283/1‑100 (MQ=255)
                                                                                       cACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCg              >  1:3621694/1‑100 (MQ=255)
                                                                                        gtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGa             >  1:2261746/3‑100 (MQ=255)
                                                                                        gtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGa             >  1:712914/3‑100 (MQ=255)
                                                                                          cGGCCATCTGAGATGGCCGACAGGTAAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGaca           <  2:1139368/100‑1 (MQ=255)
                                                                                           ggCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGacac          >  2:2992852/1‑100 (MQ=255)
                                                                                           ggCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGacac          >  1:2468222/1‑100 (MQ=255)
                                                                                                tCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGACACCTTCa     >  1:755408/1‑100 (MQ=255)
                                                                                                tCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGACACCTTCa     <  2:2017321/100‑1 (MQ=255)
                                                                                                   gagaTGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGACACCTTCATtc  <  1:693034/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
AATTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGACACCTTCATTC  >  NC_000913/2032237‑2032435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: