| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,048 | 0 | G | T | 24.5% | 242.7 / 68.6 | 94 | intergenic (‑258/+50) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base G (35/36); new base T (23/0); total (58/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.56e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.78e-01 | |||||||||||
CGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCA > NC_000913/3705951‑3706143 | cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAg < 1:1814239/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAgc > 1:1944092/1‑100 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAgc > 2:1478234/1‑100 (MQ=255) ccgatcttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg < 1:2018964/94‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg > 1:343608/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg > 2:376388/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg > 2:1671658/1‑100 (MQ=255) attttgtaggCCGGATAAGGCGTTAACGCCGCATCCTGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcgc > 2:471679/10‑100 (MQ=17) ttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAATCATGAAAATTCAATACATTGC‑‑A‑AG‑AT‑TTTC‑‑GTAGGCCTGATAAGCGTAGCGCATc > 1:1040961/7‑100 (MQ=17) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg < 1:1252198/100‑1 (MQ=255) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAGCACGCAAACTCAATATATTGC‑‑A‑GA‑GA‑TCAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 1:560033/5‑100 (MQ=17) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcgagatcgg > 2:2018953/1‑93 (MQ=255) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAgg > 1:236987/1‑100 (MQ=255) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAACCTGCAAATTCAATATATTGC‑‑A‑GG‑AT‑ACGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:730057/3‑100 (MQ=18) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGc < 1:1624273/100‑1 (MQ=255) ggtcggataaggcgTTCACGCCGCATCCGACCCACAAAGTCTTGCAAAATCAATAAATTGC‑‑AGGA‑AC‑GAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:73401/11‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGC‑‑A‑‑A‑TA‑TGAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGcga > 1:563293/2‑98 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAATTGTGTAAATTCAATAAATTGA‑‑T‑CG‑AT‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:1132936/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAACATGCAAATTCAATAGATTGC‑‑A‑GAGAT‑TAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:217134/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAATCATGCAAATCCAAAATATTGC‑‑A‑GG‑AG‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAt > 1:1329195/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAATCATGCAAATCCAAAATATTGC‑‑A‑GG‑AG‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAt > 1:643340/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAACCGCGCAAATTCAATATATTGCGGA‑GA‑AA‑AT‑‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGctg > 1:572536/2‑98 (MQ=21) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 2:1165565/1‑100 (MQ=255) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:1906487/1‑100 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAATCGTGCAAATTCAACATATTGC‑‑‑‑‑A‑AT‑TCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGctg > 1:335593/1‑98 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAACCGCGCAAATTCAATATATTGCGGA‑GA‑AA‑AT‑‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGctgt > 1:1336869/1‑97 (MQ=21) ccggataaggcgTTTACGCCGCATCCGGCCTACAAAAACGTGCAAATTCAATACATTGC‑‑ATGG‑GC‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 2:1077409/9‑98 (MQ=17) ccggataaggcgTTCACGCCGCATCCGGCCTACAAAATTGTGTAAATTCAATAAATTGA‑‑T‑CG‑AT‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 1:1714715/9‑98 (MQ=21) cggataaggcgTTTACGCCGCATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGC‑‑ATGG‑GC‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaatt > 2:618536/8‑97 (MQ=18) cggataaggcgTTCACGCCGCATCCGGCCTACAAAAACCTGCAAATTCAATATATTGC‑‑A‑GG‑AT‑ACGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaatt > 1:1485094/8‑97 (MQ=18) cGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:192989/1‑98 (MQ=255) ggataaggcgTTTACGCCGCATCCGGCCTACAAATTC‑TGCAAATTCAACAAATTGC‑‑‑‑GA‑ATCCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttgc > 1:1143073/7‑98 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTACAAGATCGTGCAAATTCAATATATTGC‑‑A‑TG‑AG‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaggtt > 2:1204936/7‑96 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTACAAAAACATGCAAATTCAATAGATTGC‑‑A‑GAGAT‑TAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAattt > 1:1723011/7‑100 (MQ=17) gATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAttttt < 1:1671670/100‑1 (MQ=255) taaggcgTTCACGCCGCATCCGGCCTACAAAATCATGAAAATTCAATACATTGC‑‑A‑AG‑AT‑TTTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCacgctcgc > 2:1025950/4‑93 (MQ=17) taaggcgTTCACGCCGCATCCGGCCTACAAAATCATGAAAATTCAATACATTGC‑‑A‑AG‑AT‑TTTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCacgctcgc > 2:1088188/4‑93 (MQ=18) aaggcgTTCACGCCGCATCCGGCCTAC‑AAATCATGCAAATCCAAAATATTGC‑‑A‑GG‑AG‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCATTtatgcgt > 2:279898/3‑98 (MQ=25) cggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct < 1:527321/100‑1 (MQ=255) gcgTTTACGCCGCATCCGGCCTACAAAATCGTGCTAATTCAATATATTGC‑‑A‑GA‑AA‑CCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAGTtttgcgttt > 2:1336865/1‑100 (MQ=18) gcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgccttt > 2:940242/1‑100 (MQ=255) gcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgccttt > 2:940427/1‑100 (MQ=255) cgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg > 1:919810/1‑100 (MQ=255) gTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgc > 2:1272430/1‑100 (MQ=255) ttAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc < 2:919808/100‑1 (MQ=255) ttAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc < 2:1944080/100‑1 (MQ=255) tAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa < 1:1043809/100‑1 (MQ=255) gCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg < 1:783479/100‑1 (MQ=255) gCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg < 1:1732902/100‑1 (MQ=255) gCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg < 2:751675/100‑1 (MQ=255) ttATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCt < 2:255911/100‑1 (MQ=255) tATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCtt < 2:1603939/100‑1 (MQ=255) ccGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa > 1:601539/1‑100 (MQ=255) cGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt > 1:1221389/1‑100 (MQ=255) cGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt < 1:1877874/100‑1 (MQ=255) ccTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc < 1:994388/100‑1 (MQ=255) tACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt > 2:549730/1‑100 (MQ=255) tACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt > 2:1180844/1‑100 (MQ=255) aCAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 1:1509133/1‑100 (MQ=255) cAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt < 1:376387/100‑1 (MQ=255) cAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt < 2:397544/100‑1 (MQ=255) aaaaTCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa < 2:242054/100‑1 (MQ=255) aaTCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat < 1:893972/100‑1 (MQ=255) aaTCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat < 2:1420627/100‑1 (MQ=255) tGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGTCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 1:1124394/100‑1 (MQ=255) tGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 2:985377/100‑1 (MQ=255) gCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg < 1:1180849/100‑1 (MQ=255) gCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg < 2:236988/100‑1 (MQ=255) cAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGa > 1:1099347/1‑100 (MQ=255) naaTTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAt > 2:1711028/2‑100 (MQ=255) aaaTTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAt > 2:1711136/1‑100 (MQ=255) ttCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATaga > 1:1634669/1‑100 (MQ=255) aCATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTATTGCCTTTGACATAAGACATGTACGGCTTTTAATAATTCGATAGAGACg > 2:375097/1‑98 (MQ=25) aTTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAA‑TATTCGATAGAGACGTTTTc > 1:93758/1‑100 (MQ=255) ttGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTc < 1:715646/100‑1 (MQ=255) c‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa > 1:1251488/1‑100 (MQ=255) a‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa > 1:194390/1‑99 (MQ=255) a‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg > 1:1191647/1‑100 (MQ=255) a‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg > 1:1322194/1‑100 (MQ=255) gA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt < 2:1344319/100‑1 (MQ=255) gA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt < 2:1344344/100‑1 (MQ=255) gA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt < 1:1272436/100‑1 (MQ=255) tctggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTg < 2:487587/97‑1 (MQ=255) gTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTTTTTTTTTTTTCAGTCTTGTATGGCTTTTAGTTATTCGATAGGGACGTTTTCGCAGTCGTGtt > 2:1786128/1‑98 (MQ=21) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 1:1478243/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 2:1866172/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 1:1461006/100‑1 (MQ=255) ggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTgaga > 1:487586/1‑97 (MQ=255) gCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTa > 2:1428428/1‑100 (MQ=255) tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg > 2:352108/1‑100 (MQ=255) aaGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATc > 1:824802/1‑100 (MQ=255) aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATcn < 1:1711040/100‑2 (MQ=255) aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa < 1:1711148/100‑1 (MQ=255) aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa < 2:464792/100‑1 (MQ=255) | CGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCA > NC_000913/3705951‑3706143 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |