| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,449,624 | Δ1 bp | 15.3% | coding (426/822 nt) | yfcO ← | DUF2544 family putative outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,449,624 | 0 | C | . | 15.3% | 468.7 / 85.3 | 157 | coding (426/822 nt) | yfcO | DUF2544 family putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (58/74); new base . (12/12); total (70/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
GTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCTCAAATGTA > NC_000913/2449527‑2449723 | tttGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCa < 2:1081170/100‑1 (MQ=255) tcttccgatcTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCa < 2:1963881/91‑1 (MQ=255) tGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATGGTGTAGTGAC‑TATCAGACCCCTGATACGTCACg > 2:354074/1‑100 (MQ=255) tGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCAc < 1:298679/99‑1 (MQ=38) tGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACg < 2:1263405/100‑1 (MQ=255) gccTTACTGCTATAATTCCGAGGCCAAGAAACGTCATAAGGGAGCACAGAACCGGATGGACAAATCGCGACGTGAA‑CAGCAGGCCCCTGAGACGTCa > 2:3565417/3‑97 (MQ=255) cTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑ccc > 1:2720088/1‑100 (MQ=255) cTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑ccc > 2:2599508/1‑100 (MQ=255) ttACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACgacac < 2:114219/100‑5 (MQ=37) tACTGACCTAATTCTCATTCCATGAAACGTCATAATGTTGAACAGACACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACgacacg < 1:1499321/100‑6 (MQ=21) tACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑ccccc > 2:2567986/1‑100 (MQ=255) tACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑ccccc < 1:3408156/100‑1 (MQ=255) cTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGCAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTg > 2:150323/1‑100 (MQ=255) tGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGGCGTGACGTATCAGGGGCCTGATA‑GTCACgacacgatt < 1:28926/100‑9 (MQ=21) gACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGga > 2:349383/1‑100 (MQ=255) gACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGga > 1:530225/1‑100 (MQ=255) gACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGga > 1:271029/1‑100 (MQ=255) aCATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑TCCCCTGgag > 2:2766639/1‑100 (MQ=255) cATAATTCTCATTCCATGACACGTCATAATGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGgag < 2:720289/99‑1 (MQ=255) aTAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGagag < 1:411752/100‑1 (MQ=255) tAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAgg > 1:2304457/1‑100 (MQ=255) aaTTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAgg > 1:2868589/1‑99 (MQ=255) aTTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TAGCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCt < 2:527089/100‑1 (MQ=255) ttCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACG‑CCCCCTGGAGAGGCtt < 2:1204232/100‑1 (MQ=38) tctcATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTc < 2:1664180/100‑1 (MQ=255) ctcATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCa < 1:789885/100‑1 (MQ=255) ctcATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCa < 1:150054/100‑1 (MQ=255) ctcATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCa > 1:1534484/1‑100 (MQ=255) tcATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCag < 2:2954087/100‑1 (MQ=255) tcATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCag < 1:2630833/100‑1 (MQ=255) cATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCGCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCcga > 2:1010930/1‑100 (MQ=255) cATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCaga > 2:2012709/1‑100 (MQ=255) aTTCCATGAAACGTCATAAGGTTGAACAGAAACGTATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGGTTCagag < 2:1907885/100‑1 (MQ=255) aTTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCagag < 2:2827653/100‑1 (MQ=255) aTTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCagag > 1:625474/1‑100 (MQ=255) aTTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCagag > 2:827780/1‑100 (MQ=255) tCCATTAGACGTCATGAGGTGGAGCAGATACTTATGGACAAATCGTGTCGTGAC‑TAGCGGGGCCCTGATACGTGACG‑CCCCCTGGAGAGGCTTCagag > 2:722728/1‑98 (MQ=255) ccATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGtca < 2:848678/100‑1 (MQ=255) cATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCagagggcg > 1:2232281/1‑96 (MQ=255) cATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGtcat > 1:2169487/1‑100 (MQ=255) aTGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGtcatt < 2:3201210/100‑1 (MQ=255) aTGAAACGTCATAAGGTCGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATGAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGtcatt > 2:2386500/1‑100 (MQ=255) tGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGtcattc < 1:1431776/100‑1 (MQ=255) aaaCGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGtcattcat < 1:3329049/100‑1 (MQ=255) aaaCGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGtcattcat < 2:1931304/100‑1 (MQ=255) aaaCGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGtcattcat < 2:530223/100‑1 (MQ=255) aCGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCatan < 2:1306214/100‑2 (MQ=255) cGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCataat < 1:3508339/100‑1 (MQ=255) cGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCataat > 1:2843062/1‑100 (MQ=255) tatatGGTTGTACACAAACGGATGGACAAATCGTGCTGTGAC‑TATTGTGCCGCTTGTATGTCACG‑CCCCCTGCAGAGGCTTCAGGGGCATTTATAATaac < 2:1468563/99‑1 (MQ=255) cATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATaac < 1:3046308/100‑1 (MQ=255) aTAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATaacc < 1:3029512/100‑1 (MQ=255) aTAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCACCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATaac < 2:3262659/99‑1 (MQ=255) ggTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATaaccaacc > 1:189950/1‑100 (MQ=255) gTTGAACAGAAACGGATGGACAAATCGTGTCGTGAA‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGGGGCTTCAGAGTCATTCATAATAaccaacca > 1:3208648/1‑100 (MQ=255) gAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATgg > 1:2456017/1‑100 (MQ=255) aaCAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGa > 1:1151813/1‑100 (MQ=255) aCAGAAACGGATGGACAAATCGTCTCGTGAC‑TATCAGGCCCCTTATACTTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGAc < 2:3469036/100‑1 (MQ=255) gAAACGGATGGACAAATCGTGTCGTGCC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGaaaa > 2:865302/1‑99 (MQ=255) gAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAg > 2:1708398/1‑100 (MQ=255) ggATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAg < 2:1462876/100‑1 (MQ=255) cttccgatctaTCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAg < 2:162496/90‑1 (MQ=255) gACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAg > 2:3388504/1‑100 (MQ=255) gACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGa > 1:1714704/1‑100 (MQ=255) aCAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGAt < 1:3575/100‑1 (MQ=255) tcgtgtcgtgAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAAt < 1:836050/100‑1 (MQ=255) cgtgtcgtgAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAAtc > 1:437328/1‑100 (MQ=255) gtgttgtgAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAAtc < 1:1807694/99‑1 (MQ=255) gtcgtgAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATctct < 1:3536882/100‑1 (MQ=255) ggcgtgACGTATCAGGGGCCTGATA‑GTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATctct > 1:1029726/3‑100 (MQ=37) ggcgtgACGTATCAGGGGCCTGATA‑GTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATctct > 1:2574354/3‑100 (MQ=37) tcgtgAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTg < 1:1781259/100‑1 (MQ=255) tcgtgAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTg < 2:444730/100‑1 (MQ=255) cgtgACGTATCAGGGGCCTGATA‑GTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTgt > 1:3070965/1‑99 (MQ=37) cgtgACGTATCAGGGGCCTGATA‑GTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGc > 1:1741671/1‑100 (MQ=38) cgtgAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGc > 1:1642467/1‑100 (MQ=255) gtgacgtATCAGGGGCCTGATA‑GTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCa > 1:339017/7‑100 (MQ=38) gtgAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCa < 1:108665/100‑1 (MQ=255) gtgAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCa < 1:1960849/100‑1 (MQ=255) tgAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCag > 1:3255970/1‑100 (MQ=255) tgAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCag < 1:419310/100‑1 (MQ=255) gAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCaga > 1:822828/1‑100 (MQ=255) tATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGAc < 1:2346382/100‑1 (MQ=255) aTCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACa < 1:3621551/100‑1 (MQ=255) aTCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACa < 2:3310599/100‑1 (MQ=255) aTCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACa < 1:3621750/100‑1 (MQ=255) cAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAAt > 1:316198/1‑100 (MQ=255) aGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATa < 2:2201179/100‑1 (MQ=255) ggCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATaa > 2:1530673/1‑100 (MQ=255) ggCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATaa > 1:1760075/1‑100 (MQ=255) ccccTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAAcc > 1:294567/1‑100 (MQ=255) ccccTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAAcc < 2:2304441/100‑1 (MQ=255) ccccTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGACTCATTCATAATAAACAACCATGGACAAGAAAAGTAAGATTCAATATCTACACAGACAAGAAc > 2:3184315/1‑99 (MQ=255) cccTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCt < 1:2383794/100‑1 (MQ=255) cccTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCt < 1:780121/100‑1 (MQ=255) cTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCTCa > 1:2516601/1‑100 (MQ=255) gATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCTCaaa > 1:2055827/1‑100 (MQ=255) gATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCTCaaa > 1:2006102/1‑100 (MQ=255) gATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCTCaaa > 2:1196049/1‑100 (MQ=255) aTACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCTCAAAt < 1:909672/100‑1 (MQ=255) | GTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACG‑CCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACCTCAAATGTA > NC_000913/2449527‑2449723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |