Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,714,168 Δ1 bp 16.0% coding (2227/2334 nt) bisC ← biotin sulfoxide reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,714,1680A.16.0% 455.6 / 88.1 162coding (2227/2334 nt)bisCbiotin sulfoxide reductase
Reads supporting (aligned to +/- strand):  ref base A (63/71);  new base . (12/14);  total (75/87)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.07e-01

Only 100 of 163 total aligned reads displayed.

GGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAAT  >  NC_000913/3714070‑3714267
                                                                                                   |                                                                                                   
ggCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAg                                                                                                    >  1:126938/1‑100 (MQ=255)
ggCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAg                                                                                                    >  1:72178/1‑100 (MQ=255)
    ggtggtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGc                                                                                                   <  2:2953549/97‑1 (MQ=255)
    ggtggtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTgg                                                                                                <  2:3013354/100‑1 (MQ=255)
    ggtggtCCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTgg                                                                                                >  1:111533/1‑100 (MQ=255)
      tggtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCG‑GCTgggg                                                                                              <  2:2786825/100‑1 (MQ=255)
      tggtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTgggg                                                                                              <  1:1801646/100‑1 (MQ=255)
      tggtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTCCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCG‑GCTgggg                                                                                              <  2:1724853/100‑1 (MQ=255)
       ggtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGga                                                                                             <  1:1630460/100‑1 (MQ=255)
       ggtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGga                                                                                             <  1:2967349/100‑1 (MQ=255)
        gtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCG‑GCTGGGgaa                                                                                            <  1:3490066/100‑2 (MQ=255)
        gtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGgag                                                                                            <  1:470778/100‑1 (MQ=255)
         ttCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCG‑GCTGGGgaat                                                                                           <  1:1173591/100‑3 (MQ=255)
         ttCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCG‑GCTGGGgaat                                                                                           <  2:1787940/100‑3 (MQ=255)
         ttCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCG‑GCTGGGgaat                                                                                           <  1:263120/100‑3 (MQ=255)
         ttCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCG‑GCTGGGgaat                                                                                           <  2:92231/100‑3 (MQ=255)
         ttCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGgaga                                                                                           >  1:2391891/1‑100 (MQ=255)
         ttCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGgaga                                                                                           >  1:1232485/1‑100 (MQ=255)
         ttCAAACGCTGTAAGTGGCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCCGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCG‑GCTGGGgaat                                                                                           <  2:2274437/100‑3 (MQ=255)
          tCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCG‑GCTGGGgaatg                                                                                          <  1:2642353/100‑4 (MQ=255)
          tCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGAt                                                                                          >  2:118196/1‑100 (MQ=255)
           cAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCGGC‑CGCGAGCTg                                                                                                 >  2:2292298/1‑92 (MQ=255)
           cAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCG‑GCTGGGgaatgg                                                                                         <  1:2776654/100‑5 (MQ=255)
           cAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATc                                                                                         >  2:638570/1‑100 (MQ=255)
           cAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATc                                                                                         >  1:626475/1‑100 (MQ=255)
            aaaCGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCG‑GCTGGGgaatggc                                                                                        <  1:330520/100‑6 (MQ=38)
                gCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTgg                                                                                    <  1:2526200/100‑1 (MQ=255)
                  tGTAAGTGTCAGTTCCGGAGCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTc                                                                                  <  1:2780674/100‑1 (MQ=255)
                  tGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTc                                                                                  <  2:126938/100‑1 (MQ=255)
                    tAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAg                                                                                <  1:2156107/100‑1 (MQ=255)
                    tAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAg                                                                                >  1:937877/1‑100 (MQ=255)
                     aaGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGc                                                                               >  1:2183248/1‑100 (MQ=255)
                        tgtCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTAATACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACg                                                                            >  2:2018505/1‑100 (MQ=255)
                           cAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTc                                                                         <  1:3059808/100‑1 (MQ=255)
                           cAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTc                                                                         >  1:3032325/1‑100 (MQ=255)
                           cAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTc                                                                         >  1:2027346/1‑100 (MQ=255)
                            aGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACATCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTc                                                                         <  1:1254165/99‑1 (MQ=255)
                             gTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCAc                                                                       <  2:675984/100‑1 (MQ=255)
                                ccGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTgc                                                                    <  1:961547/100‑1 (MQ=255)
                                       nttGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGttt                                                             >  2:3512596/2‑100 (MQ=255)
                                       gTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGttt                                                             >  1:1448090/1‑100 (MQ=255)
                                         tGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGttttt                                                           <  1:149957/100‑1 (MQ=255)
                                          gTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTa                                                          >  1:1870493/1‑100 (MQ=255)
                                          gTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTa                                                          >  1:1831186/1‑100 (MQ=255)
                                          gTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGACCTTTGGTCAGCACGTTCACTGCGCCGTTTTTa                                                          >  2:414272/1‑100 (MQ=255)
                                           tATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTTGTCAGCACGTTCACTGCGCCGTTTTTAc                                                         >  2:1023922/1‑100 (MQ=255)
                                           tATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTAc                                                         <  1:2139077/100‑1 (MQ=255)
                                            aTTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGAACTTTGGTCAGCACGTTCACTGCGCCGTTTTTACa                                                        >  1:776462/1‑100 (MQ=255)
                                             tttttCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACaa                                                       <  2:2692301/100‑1 (MQ=255)
                                              ttttCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATCCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACaa                                                       <  1:2245344/99‑1 (MQ=255)
                                                 tCCAGCCATGCCAGCGCCGTATTACCCGCACAACCAGTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATAc                                                   >  1:2566018/1‑100 (MQ=255)
                                                  ccAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATAcc                                                  <  2:702680/100‑1 (MQ=255)
                                                   cAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACaagatcgg                                                 >  1:1000020/1‑94 (MQ=255)
                                                   cAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCg                                                 <  1:102410/100‑1 (MQ=255)
                                                   cAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCg                                                 >  2:3182371/1‑100 (MQ=255)
                                                   cAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCg                                                 >  1:2483904/1‑100 (MQ=255)
                                                    aGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGt                                                >  1:1853020/1‑100 (MQ=255)
                                                    aGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGt                                                >  1:2035036/1‑100 (MQ=255)
                                                     gCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTc                                               >  1:730055/1‑100 (MQ=255)
                                                        aTGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGc                                            >  2:2130909/1‑100 (MQ=255)
                                                          gCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCgg                                          <  1:622335/100‑1 (MQ=255)
                                                          gCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCgg                                          >  1:3375460/1‑100 (MQ=255)
                                                          gCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCgg                                          <  2:918171/100‑1 (MQ=255)
                                                          gCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCgg                                          <  1:2688199/100‑1 (MQ=255)
                                                          gCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCgg                                          >  1:980661/1‑100 (MQ=255)
                                                          gCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCgg                                          <  1:2310277/100‑1 (MQ=255)
                                                             aGCGCCGTATTACCCGCACAGCCATGCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTa                                       <  1:372080/100‑1 (MQ=255)
                                                                    tgttgcccGCACAGCCATTCCACAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATcc                                  <  2:464992/93‑1 (MQ=255)
                                                                        aCCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATcc                            >  2:1049437/1‑100 (MQ=255)
                                                                           cGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGc                         <  1:138536/100‑1 (MQ=255)
                                                                           cGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGc                         <  1:3159252/100‑1 (MQ=255)
                                                                           cGCACAGCCATTCCCCAGC‑CGCGAGCT‑‑GGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCa                       >  2:2301492/1‑100 (MQ=255)
                                                                             ccaaagatctCCCCAGCTCGCG‑GCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCCTCAGCGGTTAAATCCAGATCTGGCCa                       >  2:3523606/10‑100 (MQ=25)
                                                                              acaGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCAt                      <  2:2379078/100‑1 (MQ=255)
                                                                               aaagatctCCCCAGCTCGCG‑GCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATg                     >  1:2304348/8‑100 (MQ=38)
                                                                                 gCCTTTCCCGTGC‑CGCGTGCTGGGGAGATCTTTGGTGCGCACGTTCTCTGCGCCGTTTTTACAAATGCCGTCAGCGGTTAAATCCAGATCCGGCCATGcc                   <  2:1505439/100‑1 (MQ=255)
                                                                                 gCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGcc                   <  1:1876409/100‑1 (MQ=255)
                                                                                 gCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGcc                   >  1:3431322/1‑100 (MQ=255)
                                                                                   cATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGcccc                 >  2:958729/1‑100 (MQ=255)
                                                                                   cATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTCAAATCCAGATCCGGCCATGcccc                 >  2:1122079/1‑100 (MQ=255)
                                                                                     ttCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCtt               <  1:2992238/100‑1 (MQ=255)
                                                                                     ttCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCtt               <  1:701214/100‑1 (MQ=255)
                                                                                     ctCCCCAGCTCGCG‑GCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCtt               >  1:1299614/2‑100 (MQ=255)
                                                                                       ccccAGCTCGCG‑GCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGGTAAATCCAGATCCGGCCATGCCCCtt               >  1:1413232/1‑98 (MQ=255)
                                                                                       ccccAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCg             >  1:52214/1‑100 (MQ=255)
                                                                                       ccccAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCg             >  2:769120/1‑100 (MQ=255)
                                                                                       ccccAGC‑CGCGAGCCGGGGCGATCTTTGGTCCGCACGTTCACTGCGCCGTTTTTACAACTACAGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCg             <  1:2902909/100‑1 (MQ=255)
                                                                                        cccAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGt            >  2:2533210/1‑100 (MQ=255)
                                                                                        cccAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGt            >  2:2480891/1‑100 (MQ=255)
                                                                                        cccAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGt            >  1:168021/1‑100 (MQ=255)
                                                                                         ccAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTg           <  1:488879/100‑1 (MQ=255)
                                                                                         ccAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTg           <  1:769124/100‑1 (MQ=255)
                                                                                          cAGC‑CGTGCGCTGGGGAGATCTTTGGTCAGCACGTTCACGGCGCCGTTTTTACAAATACCGGCAGCTGTTAAATCCATATCCGGCCATGTCCTTTCg             <  2:3034886/97‑1 (MQ=255)
                                                                                          cAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGa          <  1:2198237/100‑1 (MQ=255)
                                                                                           aGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGaa         <  1:1445104/100‑1 (MQ=255)
                                                                                            gC‑CGCGAGCTGGTTAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAAt        <  2:3450136/100‑1 (MQ=255)
                                                                                            gC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAAt        <  1:1761703/100‑1 (MQ=255)
                                                                                            gC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAAt        >  1:2069366/1‑100 (MQ=255)
                                                                                             c‑cGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATg       <  2:2828182/100‑1 (MQ=255)
                                                                                                  gAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCaaa   <  2:2882943/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAAT  >  NC_000913/3714070‑3714267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑