| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,390,016:1 | +C | 16.5% | intergenic (+52/+32) | yfbP → / ← nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,390,016 | 1 | . | C | 16.5% | 546.3 / 113.8 | 158 | intergenic (+52/+32) | yfbP/nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| Reads supporting (aligned to +/- strand): ref base . (61/71); new base C (13/13); total (74/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.02e-01 | |||||||||||
Only 100 of 165 total aligned reads displayed.
CAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTA > NC_000913/2389917‑2390115 | cAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATg > 2:1319947/1‑100 (MQ=255)cAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATg < 1:1359526/100‑1 (MQ=255)cAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATg < 1:1359555/100‑1 (MQ=255) tATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tcgg < 1:2829225/100‑1 (MQ=255) aTGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tcggc < 2:2895970/100‑1 (MQ=255) tGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tcggcg < 1:338367/100‑1 (MQ=255) ggttAGAGTAGGTTGGCGATAGTCGTACACAGTTGAGTTAACGCTATGCGTCTGTCTACTATCCCTTATTTGACACGAGAACCGGCGAGCATG‑Tcggcga < 2:2302861/98‑2 (MQ=255) gTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tcggcgg > 1:1072952/1‑100 (MQ=255) tttAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCggcgg‑c > 2:1115228/1‑100 (MQ=255) tttAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCggcgg‑c < 2:2824414/100‑1 (MQ=255) ttAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTcggcggtt < 1:1534585/100‑3 (MQ=255) tAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTCGGCGG‑t‑tt < 1:2237582/100‑1 (MQ=255) agagTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑ttt > 1:3151070/1‑100 (MQ=255) agagTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTCGGCGG‑t‑ttt < 1:2148358/100‑1 (MQ=255) gagTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTc < 1:3169085/100‑1 (MQ=255) gagTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCggcgg‑c < 2:198983/96‑1 (MQ=255) agTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCt < 2:401269/100‑1 (MQ=255) agTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTCGGCGG‑t‑ttttc < 1:2727489/100‑3 (MQ=38) gTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑t‑ttttct < 1:2543545/100‑4 (MQ=255) gTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTg < 2:3068363/100‑1 (MQ=255) gTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTCGGCGG‑t‑ttttct < 1:1253871/100‑4 (MQ=38) tATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCt < 2:3555650/98‑1 (MQ=255) aTTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAG‑AAAGCCGCCGA‑CATGCTCGGCGG‑t‑ttttctgaa < 2:1359149/100‑7 (MQ=21) aTTGTGGCGATAGTCGTACACAGTTCCCTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGAc < 2:3230978/100‑1 (MQ=255) ttttGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACt > 2:3578190/1‑100 (MQ=255) tttGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACtt < 1:1691541/100‑1 (MQ=255) tttGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAG‑AAAGCCGCCGA‑CATGCTCGGCGG‑t‑ttttctgaaaa < 1:1178273/100‑9 (MQ=21) tttGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAG‑AAAGCCGCCGA‑CATGCTCGGCGG‑t‑ttttctgaaaa < 1:2071804/100‑9 (MQ=18) ttGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTa < 2:3393522/100‑1 (MQ=255) gCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACaa < 2:2704286/100‑1 (MQ=255) tctgTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGt < 1:1731089/97‑1 (MQ=255) tAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTa < 2:1273005/100‑1 (MQ=255) tAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTa < 1:2518403/100‑1 (MQ=255) tAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTa < 2:2669169/100‑1 (MQ=255) tAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTATTCAGCAAACCCGCCAAGCATG‑TCGGCGG‑C‑TTTCTAACTTACAAAGTa > 2:700722/1‑100 (MQ=255) gTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTaga > 2:1731081/1‑98 (MQ=255) gTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAAc > 1:122922/1‑100 (MQ=255) gTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAAc < 2:2180652/100‑1 (MQ=255) gTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAAc > 1:119219/1‑100 (MQ=255) cGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAg > 1:1933059/1‑100 (MQ=255) gTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGa > 2:686451/1‑100 (MQ=255) tACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGAt > 1:1101994/1‑100 (MQ=255) acacAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGAtt < 1:791207/100‑1 (MQ=255) acacAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGAtt > 1:660280/1‑100 (MQ=255) cacaGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTa < 1:2083576/100‑1 (MQ=255) acacTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTAc < 2:905452/100‑1 (MQ=255) caGTTCACTTAACGCTCTGCGTCTAGCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACa < 2:1623518/100‑1 (MQ=255) gTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATc > 2:2472546/1‑100 (MQ=255) ttAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGc > 1:3606805/1‑100 (MQ=255) ttAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGc > 2:3276239/1‑100 (MQ=255) tAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCa < 1:1587197/100‑1 (MQ=255) tAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCACCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGc > 2:2985154/1‑99 (MQ=255) tAACGCTCTGCGTCTATCTACTACCCCTTCTTTTCCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCa < 2:599730/100‑1 (MQ=255) ctctGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGcc > 1:959586/1‑100 (MQ=255) ctGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCaa > 2:2904520/1‑100 (MQ=255) gCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAAc > 2:2834748/1‑100 (MQ=255) gTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGc < 1:1931021/100‑1 (MQ=255) tctatctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGca > 1:3291100/1‑100 (MQ=255) ctatctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGcac < 2:1798013/100‑1 (MQ=255) ctactaTCCCTTATTTTTCAGAAAAACCGCCGAGCATG‑TCGACGG‑C‑TTTTTGACTTAAAAAATAACAGATTACATCAGCGGCATTGCCAAACGCACaa > 2:2343950/1‑98 (MQ=255) tactaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGc > 1:583112/1‑100 (MQ=255) actaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCt > 1:3223562/1‑100 (MQ=255) actaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCt > 2:352087/1‑100 (MQ=255) ccTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAg > 2:257614/1‑100 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGTCATTGCTAAACGCACAATGCTAATCAg > 2:430868/1‑99 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGc > 1:3628456/1‑100 (MQ=255) tttttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGACATTGCCAAACGCACAATGCTAATCAGCGGtt > 2:512842/1‑100 (MQ=255) ttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtgtg < 2:1700498/100‑1 (MQ=255) agtcagaaagccgccgA‑CATGCTCGGCGGTT‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCCGCGGTtgt > 1:1510463/11‑100 (MQ=18) agtcagaaagccgccgA‑CATGCTCGGCGGTT‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtgt > 2:116329/11‑100 (MQ=21) agtcagaaagccgccgA‑CATGCTCGGCGG‑TTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtgt > 1:827037/11‑100 (MQ=21) agtcagaaagCCGCCGA‑CATGCTCGGCGGTT‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtgt > 2:2232320/7‑100 (MQ=21) tCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTgg < 2:2802691/100‑1 (MQ=255) tCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGAATTACAAAGTAACAGATTACAACAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTgg > 1:304346/1‑100 (MQ=255) tcagaaagccgccgA‑CATGCTCGGCGG‑TTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTgg > 1:1281711/9‑100 (MQ=21) gaGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATAGCCAAACGCACAATGCTAATCAGCGGTCGTGGc > 2:648138/2‑100 (MQ=255) cggAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGc > 1:2912965/3‑100 (MQ=255) cAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGc > 1:3121419/1‑100 (MQ=255) cAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGc > 1:2200413/1‑100 (MQ=255) cAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGCTGTGGc > 2:1527771/1‑100 (MQ=255) cagaaagccgccgA‑CATGCTCGGCGG‑T‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGcc > 2:2074672/8‑100 (MQ=37) cagaaagCCGCCGA‑CATGCTCGGCGGTT‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGc > 1:2025525/4‑100 (MQ=25) aGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGc < 2:1911299/99‑1 (MQ=255) gAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCa > 2:1345329/1‑100 (MQ=255) aaaaCCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATa < 1:1817061/100‑1 (MQ=255) agccgccgA‑CATGCTCGGCGG‑TTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATac > 1:806171/3‑100 (MQ=37) aaCCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATaca < 1:1654873/100‑1 (MQ=255) aaCCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATaca > 1:2329023/1‑100 (MQ=255) aCCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATacac > 1:1460624/1‑100 (MQ=255) aCCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATacac > 2:2326504/1‑100 (MQ=255) aCCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATACTAATCAGCGGTTGTGGCCATacac < 1:1326309/100‑1 (MQ=255) ccgccgAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACAcc < 1:304396/100‑1 (MQ=255) cgAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGc < 1:3566177/100‑1 (MQ=255) cgAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCCGCATGGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGc < 2:619369/100‑1 (MQ=255) aGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAc < 1:2274246/100‑1 (MQ=255) gCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAcc < 1:3025179/100‑1 (MQ=255) aTG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAg < 1:921023/100‑1 (MQ=255) tG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGt > 2:1327350/1‑100 (MQ=255) g‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTa < 2:1336993/100‑1 (MQ=255) g‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTa > 2:297113/1‑100 (MQ=255) | CAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTA > NC_000913/2389917‑2390115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |