New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 591865	116 (0.900)	21 (0.180)	10/162	NT	15.8%	coding (1314/2238 nt)	nfrB	bacteriophage N4 receptor, inner membrane subunit
	?	NC_000913	= 591878	118 (1.000)					coding (1301/2238 nt)	nfrB	bacteriophage N4 receptor, inner membrane subunit

TGTTTTATCCCACGCCACGCGACGTGGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/591760‑591865 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgcaggGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCATGGCCAACTGGCGCGCGCTAAAACAGGTACTTCAACACGGCGATCCACGT  <  NC_000913/591878‑591781                                                                                                                                                                                                              TGTTTTATCCCACGCCACGCGACGTGGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGA                                                                                                          <  2:3532847/100‑1 TGTTTTATCCCACGCCACGCGACGTGGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGA                                                                                                          <  2:2518981/100‑1  GTTTTATCCCACGCCACGCGACGTGGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGAC                                                                                                         <  1:3238269/100‑1  GTTTTATCCCACGCCACGCGACGTGGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGAC                                                                                                         >  2:1790550/1‑100  GTTTTATCCCACGCCACGCGACGTGGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGAC                                                                                                         >  1:2959234/1‑100   TTTTTTCCCACGCCACGCGACGTGGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGAC                                                                                                         <  2:1166229/99‑1   TTTTATCCCACGCCACGCGACGTGGATCGCCGTGTTGGAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACG                                                                                                        >  2:1941074/1‑100    TTTATCCCACGCCACGCGACGTGGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGC                                                                                                       <  1:2877864/100‑1     TTATCCCACGCCACGCGACGTGGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCA                                                                                                      >  1:962902/1‑100      TATCCCACGCCACGCGACGTGTATCGTCGTGTTAAAGTACCTGTTTTGGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAG                                                                                                     <  1:621394/100‑1       ATCCCACGCCACGCGACGTGGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGG                                                                                                    >  2:1169300/1‑100       ATCCCACGCCACGCGACGTGGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGG                                                                                                    >  2:1180712/1‑100          CCACGCCACGCGACGTGGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGC                                                                                                 >  2:1667411/1‑100                          GGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCG                                                                                 >  1:5038/1‑100                            ATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTC                                                                               <  1:3477822/100‑1                             TCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCT                                                                              <  1:50005/100‑1                             TCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCT                                                                              <  1:1005163/100‑1                              CGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTT                                                                             <  1:2868663/100‑1                              CGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTT                                                                             <  1:39648/100‑1                               gcaGTGTTGAAGTCCCTGTTTTCGCGCGCGCCAGTTGGCCCTGAAGTTGATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTT                                                                             <  2:300441/96‑1                               GCCGTGTTGAAGTATCTGTTTTAGCGCGCGCCATTTGGTCATGAACGTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTT                                                                            <  2:192122/100‑1                               GCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTT                                                                            <  1:2810308/100‑1                               GCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTT                                                                            <  2:2745885/100‑1                                CCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTT                                                                           <  1:1204831/100‑1                                CCGTGTTGAAGTACCTGTTTTAGCGCGCACCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTT                                                                           <  2:2012036/100‑1                                  GTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCT                                                                         <  2:1461032/100‑1                                  GTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCT                                                                         <  2:3456176/100‑1                                  GTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCT                                                                         <  1:1667419/100‑1                                    GTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGG                                                                       <  1:3401843/100‑1                                    GTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGG                                                                       <  2:2275407/100‑1                                    GTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGG                                                                       <  2:1927215/100‑1                                                       CGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCA                                                    <  2:5038/100‑1                                                       CGCGCGCCAGTTGGCCATGAAGTTAATCACGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCA                                                    <  2:3397783/100‑1                                                        GCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCAT                                                   <  1:2242182/100‑1                                                                                                   GACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCATGGCCAACTGGCGCGCGCTAAAACAGGTACTTCAACACGGCGAT        <  1:3209662/100‑1                                                                                                   GACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCATGGCCAACTGGCGCGCGCTAAAACAGGTACTTCAACACGGCGAT        >  1:1372684/1‑100                                                                                                   GACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCATGGCCAACTGGCGCGCGCTAAAACAGGTACTTCAACACGGCGAT        >  2:1531792/1‑100                                                                                                    ACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCATGGCCAACTGGCGCGCGCTAAAACAGGTACTTCAACACGGCGATC       <  1:1699344/100‑1                                                                                                     CGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCATGGCCAACTGGCGCGCGCTAAAACAGGTACTTCAACACGGCGATCC      <  2:1819375/100‑1                                                                                                     CGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATGAACTCCATGGCCAACTGGCGCGCGCTAAAACAGGTACTTCAACACGGCGATCC      >  1:166114/1‑100                                                                                                       CAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCATGGCCAACTGGCGCGCGCTAAAACAGGTACTTCAACACGGCGATCCAC    <  2:2001420/100‑1                                                                                                         GGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCATGGCCAACTGGCGCGCGCTAAAACAGGTACTTCAACACGGCGATCCACGT  >  1:2197160/1‑100                                                                                                         GGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCATGGCCAACTGGCGCGCGCTAAAACAGGTACTTCAACACGGCGATCCACGT  <  1:2970476/100‑1                                                                                                                                                                                                              TGTTTTATCCCACGCCACGCGACGTGGATCGCCGTGTTGAAGTACCTGTTTTAGCGCGCGCCAGTTGGCCATGAAGTTAATCAGGTTGCCCCAGAAAAGACGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/591760‑591865 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgcaggGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCATGGCCAACTGGCGCGCGCTAAAACAGGTACTTCAACACGGCGATCCACGT  <  NC_000913/591878‑591781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.