New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 1625934 | 104 (0.800) | 19 (0.160) | 11/166 | NT | 15.2% | coding (1447/2046 nt) | dcp | dipeptidyl carboxypeptidase II |
? | NC_000913 | = 1625952 | 115 (0.960) | coding (1429/2046 nt) | dcp | dipeptidyl carboxypeptidase II |
GCGAGCGAATACCTGCGGATGCGTTGCCCAGTGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1625830‑1625934 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgctgCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTCCGGCACCAACACGCCGCGTGATTTTGTCGAATTTCCGTCGCAAATCAACGAACACTGGGCA < NC_000913/1625952‑1625854 GCGAGCGAATACCTGCGGATGCGTTGCCCAGTGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAA > 2:3596173/1‑100 CGAGCGAATACCTGCGGATGCGTTGCCCAGTGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAAC > 2:3078240/1‑100 GAGCGAATACCTGCGGATGCGTTGCCCAGTGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACG > 1:1292130/1‑100 CGAATACCTGCGGATGCGTTGCCCAGTGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTG > 1:1506129/1‑100 CGAATACCTGCGGATGCGTTGCCCAGTGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTG < 2:2610592/100‑1 CCAGTGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGTCAT‑ACGCTGCACGGCCTTTTTGCCCGCCAGC < 1:1318731/100‑1 CCAGTGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGC < 1:712820/100‑1 CCAGTGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGC < 1:567001/100‑1 CAGTGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGCG < 2:3355179/100‑1 AGTGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGCGT < 2:705303/100‑1 AGTGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGCGT < 1:2187071/100‑1 TGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGCGTTA < 2:1305811/100‑1 TGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGCGTTA < 2:1512156/100‑1 GTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGCGTTAT < 1:1818531/100‑1 TTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCTCCAGCGTTATG < 1:1260480/100‑1 TTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGCGTTATG < 2:1904134/100‑1 TTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGCGTTATG < 2:2182639/100‑1 TCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGCGTTATGC < 1:511373/100‑1 TCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGCGTTATGC < 2:2872603/100‑1 CGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGCGTTATGCC < 1:3354638/100‑1 GTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGCGTTATGCCA < 2:138632/100‑1 TTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTGCACGGCCTTTTTGCCCGCCAGCGTTATGCCAC < 1:3128641/100‑1 ATTTGCGCCGGAAATTCGACAAAATCACTCGGCGTGTTTGTGCCGGAAAGCGTGGTCAT‑ACGCTGCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGn < 2:200537/99‑2 TGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGGTCAT‑ACGCTGCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTC < 2:1487648/100‑1 CGCTGCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTCCGGCACCAACACGCCGCGTGATTTTGTCGAATTTCCGTCGCAAATCAACGAACACTG > 1:684200/1‑100 CGCTGCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTCCGGCACCAACACGCCGCGTGATTTTGTCGAATTTCCGTCGCAAATCAACGAACACTG > 1:978/1‑100 GCTGCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTCCGGCACCAACACGCCGCGTGATTTTGTCGAATTTCCGTCGCAAATCAACGAACACTGG > 1:2805481/1‑100 CTGCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTCCGGCACCAACACGCCGCGTGATTTTGTCGAATTTCCGTCGCAAATCAACGAACACTGGG < 2:3173689/100‑1 TGCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTCCGGCACCAACACGCCGCGTGATTTTGTCGAATTTCCGTCGCAAATCAACGAACACTGGGC < 2:1932787/100‑1 TGCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTCCGGCACCAACACGCCGCGTGATTTTGTCGAATTTCCGTCGCAAATCAACGAACACTGGGC < 2:304067/100‑1 TGCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTCCGGCACCAACACGCCGCGTGATTTTGTCGAATTTCCGTCGCAAATCAACGAACACTGGGC > 2:1130536/1‑100 GCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTCCGGCACCAACACGCCGCGTGATTTTGTCGAATTTCCGTCGCAAATCAACGAACACTGGGCA > 2:2285181/1‑100 GCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTCCGGCACCAACACGCCGCGTGATTTTGTCGAATTTCCGTCGCAAATCAACGAACACTGGGC < 1:874229/99‑1 GCGAGCGAATACCTGCGGATGCGTTGCCCAGTGTTCGTTGATTTGCGACGGAAATTCGACAAAATCACGCGGCGTGTTGGTGCCGGAAAGCGTGG‑CATAACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1625830‑1625934 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgctgCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTCCGGCACCAACACGCCGCGTGATTTTGTCGAATTTCCGTCGCAAATCAACGAACACTGGGCA < NC_000913/1625952‑1625854 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |