| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1961815 = | 105 (0.810) | 20 (0.170) | 15/158 | NT | 18.0% | intergenic (+20/‑157) | argS/yecT | arginyl‑tRNA synthetase/uncharacterized protein |
| ? | NC_000913 | 1961845 = | 89 (0.780) | intergenic (+50/‑127) | argS/yecT | arginyl‑tRNA synthetase/uncharacterized protein | |||||
TTACGCTTCTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATCAGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1961923‑1961815‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcaggcttTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACG > NC_000913/1961845‑1961943 TTACGCTTCTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTG > 2:791287/1‑100 ACGCTTCTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGAT > 1:2970325/1‑100 ACGCTTCTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGA > 1:2973984/1‑99 CGCTTCTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATC > 2:1882104/1‑100 CGCTTCTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATC > 1:983390/1‑100 CGCTTCTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATC > 2:473207/1‑100 GCTTCTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATCA < 1:3438486/100‑1 CTTCTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATCAG > 2:708476/1‑100 TCTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATCAGGC > 2:3577648/1‑100 CTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATCAGGCT < 2:379343/100‑1 CTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATCAGGCT < 1:1623388/100‑1 CTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATCAGGCT < 1:2927361/100‑1 TGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATCAGGCTT > 2:1351169/1‑100 TGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATCAGGCTT > 2:571278/1‑100 CCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATCAGGGTTAGCC‑GATCAGGCTTTTT < 1:611119/100‑1 TATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATCAGGGTTAGCC‑GATCAGGCTTTTTTATTn < 2:810580/100‑2 TATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATCAGGGTTAGCC‑GATCAGGCTTTTTTAT < 2:3020340/98‑1 GATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTT > 1:3619621/1‑100 GGCAATAAAAAAGCCTGATC‑GGCT‑ACCCTGGTCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTGGGAT > 2:2721660/1‑100 CAATAAAAAAGCCTGATC‑GGCTAACCCTGATCGGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATA > 1:3455655/1‑100 AATAAAAAAGCCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGAATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAA > 2:2333293/1‑100 TAAAAAAGCCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGA > 1:1470394/1‑100 AAAAAAGCCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAG > 1:1613840/1‑100 tctAAGCCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGG < 1:1365891/97‑1 AAAAAGCCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGG > 2:132820/1‑100 AAAGCCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAACTGAACTTGCCATTGTTTTCTCAGTGTGGGATAAGAGGCC > 2:720225/1‑100 AAAGCCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCC > 1:1889313/1‑100 AAGCCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGaga > 2:1365883/1‑97 AGCCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAG > 1:1531729/1‑100 AGCCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGG > 2:1780914/1‑96 AGCCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACAGTTGGATAAGAGGCAAG > 2:1428786/1‑100 GCCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGA > 1:547489/1‑100 CCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAA > 1:2146869/1‑100 CCTGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAA > 2:32649/1‑100 TGATC‑GGCTAACCCTGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCTAGAAG > 2:2509008/1‑99 GATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCC > 1:1405100/1‑100 GATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCC > 1:305929/1‑100 ATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCA < 1:1839746/100‑1 CAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGG < 1:504468/100‑1 ctGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGG < 1:2233901/98‑1 AGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGG < 2:1633099/100‑1 GGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGA > 2:308628/1‑100 GCTTTTTTATTGCCATCTAATTGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAg > 2:2233887/1‑99 CTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAA < 2:123901/100‑1 CTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATAGTTTTATCACTGTTGGATAAGAGGCCAGAAACGTAATATCCGGCCCCAGGGAAA > 2:39155/1‑100 TTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGATGCTTAATATTTGGCCCCAGGGAAAC < 2:1988385/100‑1 TTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACGGTTGGATAAGAGGCCAGAAGCGTAATCTCCGGCCCCAGGGAAAC > 2:1526271/1‑100 TTTTTATTGCCATCTAAATGGATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACG < 2:1889915/100‑1 TTACGCTTCTGGCCTCTTATCCAACAGTGAGAAAACAATGGCATGTCCATTTTCAGAATACATTTAGATGGCAATAAAAAAGCCTGATC‑GGCTAACCCTGATCAGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1961923‑1961815‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcaggcttTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACG > NC_000913/1961845‑1961943 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |