| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4394801 = | 155 (1.200) | 15 (0.120) | 8/166 | NT | 9.9% | coding (736/1548 nt) | nnr | bifunctional NAD(P)H‑hydrate repair enzyme; C‑terminal domain ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase and N‑terminal domain NAD(P)H‑hydrate epimerase |
| ? | NC_000913 | 4394833 = | 129 (1.070) | coding (768/1548 nt) | nnr | bifunctional NAD(P)H‑hydrate repair enzyme; C‑terminal domain ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase and N‑terminal domain NAD(P)H‑hydrate epimerase | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
AGCACGCAGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4394905‑4394801‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGTTTAGTCCGAGTACTGAC > NC_000913/4394833‑4394931 AGCACGCAGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTC > 2:474985/1‑100 GCACGCAGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCG > 1:2170522/1‑100 GCACGCAGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCG < 1:3106319/100‑1 GCACGCAGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTC < 2:2899407/99‑1 cgatctGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGG < 2:1190798/94‑1 ACGCAGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGG < 1:2507184/100‑1 ACGCAGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGG < 1:2507300/100‑1 CGCAGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGGC < 2:1851005/100‑1 CGCAGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGGC < 1:2431151/100‑1 CGCAGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGGC < 1:282518/100‑1 GCAGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGGCG < 1:732186/100‑1 GCAGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGGC > 2:413583/1‑99 GCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGagatcg > 1:1190806/1‑94 CCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGGCGACGCGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATG > 2:866634/1‑100 TTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGC > 2:2861275/1‑100 CCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGC > 2:1877578/1‑100 CCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGC > 1:699342/1‑100 CAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCG > 1:1363134/1‑100 AGCCGCCCGTGATCGCCTTTATGCGAAGTCGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGC > 1:2575145/1‑100 AGCCGCCCGTGATAGCCTTTATGCGAAGTCGGGAGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGGCGGGGGAAGCGG > 2:1689101/1‑97 CCGCCCGTGATCGCCTTTATGCGAAGTCGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTG > 1:2368463/1‑100 GCCCGTGATCGCCTTTATGCGAAGTCGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCG > 1:72797/1‑100 GCCCGTGATCGCCTTTATGCGAAGTCGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCG > 1:278495/1‑100 GCCCGTGATCGCCTTTATGCGAAGTCGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCG > 2:3184163/1‑100 GCCCGTGATCGCCTTTATGCGAAGTCGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCG > 2:3046973/1‑100 GCCCGTGATCGCCTTTATGCGAAGTCGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCT > 2:684782/1‑97 GCCCGTGATCGCCTTTATGCGAAGTCGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCGATTCGTATGACGGGGGAAGCGGCGCTGCG > 1:568169/1‑100 CCCGTGATCGCCTTTATGCGAAGTCGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCG > 1:1652471/1‑99 CGGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGTTTAGTCCGAGTA > 2:1032057/1‑100 GGGCGGC‑TGGTAGTTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGTTTAGTCCGAGTAC < 2:3130097/100‑1 GGGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGTTTAGTCCGAGTAC < 1:2800539/100‑1 GGCGGG‑TGGGAATTATCGGTGGCGATCACGGCACGGCGGGGGTTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGTTTAGTCCGAGTACT < 2:672307/100‑1 GGCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGTTTAGTTCGAGTACT > 2:2837133/1‑100 GCGGG‑TGGTAGTTATCGGTGGCGATCGCGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGTTTAGTCCGAGTACTG < 2:246121/100‑1 GCGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGTTTAGTCCGAGTACTG < 1:2731911/100‑1 CGGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGTTTAGTCCGAGTACTGA > 1:865646/1‑100 GGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGGTTAGTCCGAGTACTGAC > 2:553259/1‑100 AGCACGCAGCGCCGCTTCCCCCGTCATACGAATAGCCCCCGCCGTGCCGTGATCGCCACCGATAATTACCAGCCGCCCGTGATCGCCTTTATGCGAAGTCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4394905‑4394801‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgGC‑TGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGTTTAGTCCGAGTACTGAC > NC_000913/4394833‑4394931 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |