BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	707773 =	NA (NA)	15 (0.130)	8/160	NT	NA	noncoding (4/165 nt)	RIP63 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP63 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
*	?	NC_000913	707805 =	NA (NA)	15 (0.130)	8/160	NT	NA	noncoding (36/165 nt)	RIP63 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP63 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site

Only 100 of 188 total aligned reads displayed.

ATAGCCGCCATTCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATCT  >  NC_000913/707675‑707872

acaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTg                                                                                                    <  1:528829‑M1/2‑1 (MQ=255)

acaaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTg                                                                                                    <  2:3415277‑M1/2‑1 (MQ=255)

 caaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTGc                                                                                                   <  1:2830145‑M1/3‑1 (MQ=255)

  aaaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTGcc                                                                                                  >  2:765475‑M1/97‑100 (MQ=255)

  aGCCGCCATTCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGcc                                                                                                  <  1:1660456/100‑1 (MQ=255)

  aGCCGCCATTCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGcc                                                                                                  >  2:3570758/1‑100 (MQ=255)

   gccgccATTCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGATTAATTTTAAGTTTCGCTATGCCg                                                                                                 <  2:560348/100‑1 (MQ=255)

   gccgccATTCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCg                                                                                                 >  1:1609068/1‑100 (MQ=255)

   gccgccATTCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCg                                                                                                 >  1:2597212/1‑100 (MQ=255)

   aaagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTGCCg                                                                                                 <  2:2748290‑M1/5‑1 (MQ=255)

    ccgccATTCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCgg                                                                                                >  1:1635319/1‑100 (MQ=255)

    ccgccATTCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCgg                                                                                                >  1:959204/1‑100 (MQ=255)

    ccgccATTCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTGTAAGTTTCGCTATGCCgg                                                                                                >  2:503470/1‑100 (MQ=255)

    aagcacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTGCCgg                                                                                                >  2:2926756‑M1/95‑100 (MQ=255)

       ccATTCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATg                                                                                             <  2:2597194/100‑1 (MQ=255)

       cacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTGCCGGATg                                                                                             <  1:118952‑M1/9‑1 (MQ=255)

       cacgcaaactcaatatattgcagagatcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTGCCGGATg                                                                                             <  2:143137‑M1/9‑1 (MQ=255)

         atgcTACGGCGGAAAATCCGGTAGGTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTGAAGTTTCGCCATGCCGGATg                                                                                             <  2:1497433/95‑1 (MQ=255)

          ttCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATggg                                                                                           <  1:1720351/99‑1 (MQ=255)

           caaactcaatatattgcagagatcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTGCCggatgtgac                                                                                         <  1:1759941‑M1/13‑5 (MQ=255)

              aCGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGtt                                                                                      <  1:1863375/100‑1 (MQ=255)

               cggcggAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGttt                                                                                     <  2:2784360/100‑1 (MQ=255)

               cggcggAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCCCTATGCCGGCAGGGTCGtt                                                                                      >  2:487633/1‑99 (MQ=255)

                  cggAAAATCCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGTGAAAGTAGGCGAGTAATTTTATGTTTCGCTATGCGGGATGGGGCGTTTACg                                                                                  <  2:2953095/100‑1 (MQ=255)

                   ggAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGt                                                                                 >  1:2985217/1‑100 (MQ=255)

                    gAAAAACCTGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTc                                                                                <  2:1937249/100‑1 (MQ=255)

                     aaaaaCCGGTATTTAACCGCACCGGTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCg                                                                               <  1:471536/100‑1 (MQ=255)

                      aaaaCCGGTATTTAACCGCACCGTTGGTCTGCTTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGc                                                                              <  2:435700/100‑1 (MQ=255)

                      aaaaCCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGc                                                                              >  1:3389151/1‑100 (MQ=255)

                        aaCCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCAt                                                                            >  1:2613376/1‑100 (MQ=255)

                          ccGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATcc                                                                          <  2:1787705/100‑1 (MQ=255)

                          ccGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATcc                                                                          >  1:802341/1‑100 (MQ=255)

                          ccGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATcc                                                                          >  1:2753935/1‑100 (MQ=255)

                          ccGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATcc                                                                          >  1:3424001/1‑100 (MQ=255)

                            ggTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCgg                                                                        >  2:1646192/1‑100 (MQ=255)

                            ggTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCgg                                                                        <  1:1930505/100‑1 (MQ=255)

                            ggTATTTAACCGAACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATGTTAAGTTTCGCTATGCCGGATGCGACGTAAACGCCCCATCCgg                                                                        <  2:971149/100‑1 (MQ=25)

                             gagatcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTGCCGGATGGGGCGTTTACGTCGCATCCGGc                                                                       >  1:2679476‑M1/70‑100 (MQ=255)

                              tATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCa                                                                      >  2:2838874/1‑100 (MQ=255)

                              agatcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTGCCGGATGGGGCGTTTACGTCGCATCCGGCa                                                                      >  1:2311286‑M1/69‑100 (MQ=255)

                                tttAACCGCTCCGTTGGGCTGCGTGAGACCTGGGCGAAGGTTGGCGAGTAATTTTAGGTTTCGCTAGGCCGGATGGGGCGTTTACGTCGCATCCGGCaa                                                                     <  2:378756/99‑1 (MQ=255)

                                tttAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAg                                                                    <  1:3568856/100‑1 (MQ=255)

                                atcatttaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtcttttcctTGCCGGATGGGGCGTTTACGTCGCATCCGGCAAg                                                                    >  1:1339405‑M1/67‑100 (MQ=255)

                                atcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTGCCGGATGGGGCGTTTACGTCGCATCCGGCAAg                                                                    >  2:3195836‑M1/67‑100 (MQ=255)

                                atcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTGCCGGATGGGGCGTTTACGTCGCATCCGGCAAg                                                                    >  1:2143841‑M1/67‑100 (MQ=255)

                                 ttAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAg                                                                    <  1:3091099/99‑1 (MQ=255)

                                 tcatgtaggcctgataagcgtagcgcatcaggcaatttagcgtttgaaactgtttgtctgttcctTGCCGGATGGGGCGTTTACGTCGCATCCGGCAAgg                                                                   >  1:327563‑M1/66‑100 (MQ=255)

                                  tAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGa                                                                  <  2:852739/100‑1 (MQ=255)

                                   aaCCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGaa                                                                 >  1:2241701/1‑100 (MQ=255)

                                   aaCCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGaa                                                                 >  1:404328/1‑100 (MQ=255)

                                    aCCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAAc                                                                <  1:2389192/100‑1 (MQ=255)

                                     ccGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACa                                                               >  1:3048827/1‑100 (MQ=255)

                                     ccGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACa                                                               >  2:2869440/1‑100 (MQ=255)

                                     ccGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACa                                                               >  2:1541329/1‑100 (MQ=255)

                                      cGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAg                                                              <  1:596098/100‑1 (MQ=255)

                                        cACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGAc                                                            <  2:1382141/100‑1 (MQ=255)

                                        cACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGAc                                                            <  1:2077570/100‑1 (MQ=255)

                                         aCCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACa                                                           <  2:2237547/100‑1 (MQ=255)

                                          ccGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACaa                                                          >  2:236803/1‑100 (MQ=255)

                                          ccGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACa                                                           <  2:638052/99‑1 (MQ=255)

                                           cGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACaaa                                                         <  1:3183554/100‑1 (MQ=255)

                                            gTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGACCAGACAAAc                                                        >  2:1440892/1‑100 (MQ=255)

                                            gTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAAc                                                        <  2:2074158/100‑1 (MQ=255)

                                              tGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAg                                                      <  2:121390/100‑1 (MQ=255)

                                                ggCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGtt                                                    >  1:1439788/1‑100 (MQ=255)

                                                 gCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGttt                                                   <  2:1664750/100‑1 (MQ=255)

                                                 gCTGCGTGATACCAGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATTCCGTTTGGGGCGTTTATGTGGCATCCTGCAAGGAACAGACGAATAg                                                      >  2:2174909/1‑97 (MQ=255)

                                                   tGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCa                                                 <  1:1768770/100‑1 (MQ=255)

                                                   tGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCa                                                 >  1:3300607/1‑100 (MQ=255)

                                                     cGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCaaa                                               <  2:685435/100‑1 (MQ=255)

                                                            ccTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTaaa                                        >  2:3134425/1‑100 (MQ=255)

                                                             cTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAAt                                       >  1:2851846/1‑100 (MQ=255)

                                                             cTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAAt                                       >  2:2669201/1‑100 (MQ=255)

                                                                 gCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGcc                                   <  1:1396517/100‑1 (MQ=255)

                                                                  cGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCt                                  >  2:1149126/1‑100 (MQ=255)

                                                                   gAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTg                                 <  2:3319412/100‑1 (MQ=255)

                                                                       gTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACATTCTCAAACCCTCAATTACCTGATgc                             >  1:1645312/1‑100 (MQ=255)

                                                                       gTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATgc                             <  2:1758740/100‑1 (MQ=255)

                                                                        tAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATgcg                            >  1:97594/1‑100 (MQ=255)

                                                                         aGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATgcgc                           <  2:1690449/100‑1 (MQ=255)

                                                                          ggCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAACCGCTAAATTGCCTGATGCGCt                          >  1:1725025/1‑100 (MQ=255)

                                                                          ggCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCt                          >  1:1301584/1‑100 (MQ=255)

                                                                           gCGAGTAATCACAAGATTCGCAATGCCGGATGGGGCGTTTACGCCGCATCCGGCAATGACCAGACAAACAGTTTCCACCGCTAAACTGCCTGATacg                            <  2:2541210/97‑1 (MQ=21)

                                                                            cGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTAc                        >  1:1508843/1‑100 (MQ=255)

                                                                             gAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACTGTTTCAAACGCTAAATTGCCTGATGCGCTACg                       <  1:3459634/100‑1 (MQ=255)

                                                                              aGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTAccc                      <  1:2472167/100‑3 (MQ=255)

                                                                               gTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCt                     <  1:1033670/100‑1 (MQ=255)

                                                                               gTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCt                     >  1:1106779/1‑100 (MQ=255)

                                                                               gTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCt                     >  1:82119/1‑100 (MQ=255)

                                                                               gTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCt                     <  2:1848954/100‑1 (MQ=255)

                                                                                    tttAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAACTTGCCTGATGCGCTACGCTTATc                 >  2:2920210/1‑99 (MQ=255)

                                                                                    tttAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCTTATCa                <  2:3525431/100‑1 (MQ=255)

                                                                                     ttAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCTTATCAg               <  1:248144/100‑1 (MQ=255)

                                                                                      tAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCTTATCAgg              <  1:1541337/100‑1 (MQ=255)

                                                                                        aGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCTTATCAGGcc            <  1:3502300/100‑1 (MQ=255)

                                                                                        aGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCTTATCAGGc             <  1:759013/99‑1 (MQ=255)

                                                                                         gTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCTTATCAGGCCt           >  1:1112096/1‑100 (MQ=255)

                                                                                             cGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAt       >  1:90686/1‑100 (MQ=255)

                                                                                                ctTGCCGGATGCGACGTAAACGCCCCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGAt    <  1:2527829‑M1/98‑1 (MQ=255)

                                                                                                 aTGCTGGATGGGTCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCCACGCTTATCAGGCCTACATGAtc   <  2:655393/100‑1 (MQ=255)

ATAGCCGCCATTCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAATTTTAAGTTTCGCTATGCCGGATGGGGCGTTTACGTCGCATCCGGCAAGGAACAGACAAACAGTTTCAAACGCTAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATCT  >  NC_000913/707675‑707872

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.