New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 805804 =NA (NA)15 (0.130) 7/164 NT NA noncoding (1/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 805836 = NA (NA)noncoding (33/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 171 total aligned reads displayed.

AGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGAT  >  NC_000913/805706‑805903
                                                                                                  |                                                                                                   
 gtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTc                                                                                                   >  2:2154669‑M1/98‑100 (MQ=255)
 gtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTc                                                                                                   >  2:2154582‑M1/98‑100 (MQ=255)
 gtaggtcggataagatgcgcaagcatcacatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTc                                                                                                   >  2:1886116‑M1/98‑100 (MQ=255)
  taggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCg                                                                                                  >  1:2202925‑M1/97‑100 (MQ=255)
  taggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCg                                                                                                  >  1:188192‑M1/97‑100 (MQ=255)
  cgcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCg                                                                                                  >  1:3080833/1‑100 (MQ=255)
  cgcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCg                                                                                                  <  2:3438528/100‑1 (MQ=255)
  cgcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCg                                                                                                  <  1:2544001/100‑1 (MQ=255)
  cgcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCg                                                                                                  >  1:2379319/1‑100 (MQ=255)
   gcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCgg                                                                                                 <  1:3281936/100‑1 (MQ=255)
   gcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCgg                                                                                                 >  2:2005406/1‑100 (MQ=255)
   aggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCgg                                                                                                 >  1:1102593‑M1/96‑100 (MQ=255)
    ggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtaggaggta                                                                                                <  2:2598121‑M1/6‑6 (MQ=255)
    cgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGga                                                                                                >  2:1585301/1‑100 (MQ=255)
     gtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGgat                                                                                               >  2:2468742‑M1/94‑100 (MQ=255)
          tATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcgat                                                                                          <  1:3229099/100‑1 (MQ=255)
          tATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGAGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcgat                                                                                          >  2:3174394/1‑100 (MQ=255)
            tCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGACATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcgatg                                                                                         >  2:1687710/1‑99 (MQ=255)
            tCAAGGCGGGTAGTTTGATTAACTTCAATAAAAAACGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcgatgc                                                                                        >  2:1688012/1‑100 (MQ=255)
                ggCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgc                                                                                    <  2:3316088/100‑1 (MQ=255)
                ggCGAGTAGTTTGAATAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgc                                                                                    >  2:1162910/1‑100 (MQ=255)
                 gcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTgcg                                                                                   >  1:2783781‑M1/82‑100 (MQ=255)
                 gCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgcg                                                                                   <  1:1490413/100‑1 (MQ=255)
                   gggTAGTTTGATTAACTTCAATAAACACCGTCAGATGTAAAAAGCGCCATGTGAGTGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCa                                                                                 <  2:1072943/100‑1 (MQ=255)
                   ggctAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCa                                                                                 <  2:395156/97‑1 (MQ=255)
                   gatctgTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCa                                                                                 <  2:940704/95‑1 (MQ=255)
                      tAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCt                                                                              <  2:2797322/100‑1 (MQ=255)
                        gTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTa                                                                            >  1:2361210/1‑100 (MQ=255)
                        gTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTa                                                                            >  1:3575214/1‑100 (MQ=255)
                        gTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTa                                                                            >  1:3245319/1‑100 (MQ=255)
                         tttGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTAt                                                                           >  2:3512852/1‑100 (MQ=255)
                          ttGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATc                                                                          <  1:914514/100‑1 (MQ=255)
                          ttGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATc                                                                          >  2:1141559/1‑100 (MQ=255)
                          ttGACTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATc                                                                          <  1:2723068/100‑1 (MQ=255)
                          tcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATc                                                                          >  1:2204976‑M1/73‑100 (MQ=255)
                           tGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         >  1:3251400/1‑100 (MQ=255)
                           tGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         <  2:2303393/100‑1 (MQ=255)
                           tGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         >  1:2682092/1‑100 (MQ=255)
                           tGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         <  1:38412/100‑1 (MQ=255)
                           cgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTAtcn                                                                         >  2:567662‑M1/72‑99 (MQ=255)
                           cgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         >  2:3104795‑M1/72‑100 (MQ=255)
                           cgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         >  1:1627163‑M1/72‑100 (MQ=255)
                           cgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         >  1:758643‑M1/72‑100 (MQ=255)
                           cgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         >  1:1733059‑M1/72‑100 (MQ=255)
                            gcatccgacaataagtgccggttgctgcgagaatgcgttatctggcttacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         >  2:2455593‑M1/71‑99 (MQ=255)
                            gcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCg                                                                        >  1:1659096‑M1/71‑100 (MQ=255)
                             aTTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGa                                                                       >  1:3152544/1‑100 (MQ=255)
                               tccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                     >  1:571883‑M1/68‑100 (MQ=255)
                                aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCt                                                                    >  1:2512521/1‑100 (MQ=255)
                                aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCt                                                                    >  2:1776781/1‑100 (MQ=255)
                                aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCt                                                                    <  2:2748724/100‑1 (MQ=255)
                                aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCt                                                                    >  2:1042418/1‑100 (MQ=255)
                                  cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTCTTGTCGTATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                  >  2:365781/1‑100 (MQ=255)
                                  cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                  >  1:1247524/1‑100 (MQ=255)
                                  cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                  <  2:1841929/100‑1 (MQ=255)
                                   ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                 <  2:3457854/100‑1 (MQ=255)
                                   ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                 >  2:1363480/1‑100 (MQ=255)
                                    tCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGa                                                                >  2:3033963/1‑100 (MQ=255)
                                    tCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGa                                                                >  1:1610481/1‑100 (MQ=255)
                                    tCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGa                                                                >  1:1442586/1‑100 (MQ=255)
                                       aTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATc                                                             <  1:1780281/100‑1 (MQ=255)
                                       aTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATc                                                             >  1:2401532/1‑100 (MQ=255)
                                        tAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCg                                                            >  1:1994499/1‑100 (MQ=255)
                                            aaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATc                                                        <  1:314578/100‑1 (MQ=255)
                                             aCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCg                                                       <  2:2427486/100‑1 (MQ=255)
                                              ccGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGa                                                      <  2:2899436/100‑1 (MQ=255)
                                                 tCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATc                                                   <  1:1356676/100‑1 (MQ=255)
                                                     aTGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTa                                               <  2:2512505/100‑1 (MQ=255)
                                                        tAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGc                                            >  1:1708799/1‑100 (MQ=255)
                                                        tAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGc                                            >  1:943243/1‑100 (MQ=255)
                                                         aaaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGcc                                           <  1:3433209/100‑1 (MQ=255)
                                                         aaaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGcc                                           >  1:532524/1‑100 (MQ=255)
                                                          aaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAg                                              >  2:3468068/1‑96 (MQ=255)
                                                          aaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCa                                          <  2:733253/100‑1 (MQ=255)
                                                          aaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCa                                          >  2:3400539/1‑100 (MQ=255)
                                                           aaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGc                                            >  2:3031147/1‑97 (MQ=255)
                                                             aGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGAt                                       >  2:3253014/1‑100 (MQ=255)
                                                              gcgcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGAt                                       >  1:99754/1‑99 (MQ=255)
                                                              gcgcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATa                                      <  2:1287250/100‑1 (MQ=255)
                                                                gcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAg                                    >  1:514896/1‑100 (MQ=255)
                                                                 ccATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGAATGCGATGCTTGCGCATCTTATCCGAACTACCAATCGCATCGAATc                                                   >  2:3427827/1‑84 (MQ=255)
                                                                   aTGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCa                                 >  1:1915364/1‑100 (MQ=255)
                                                                    tgtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAt                                >  1:2802007/1‑100 (MQ=255)
                                                                      tgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAttt                              >  1:2963094/1‑100 (MQ=255)
                                                                       gAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAtttt                             >  1:2592851/1‑100 (MQ=255)
                                                                        aaTGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTc                            <  1:2497953/100‑1 (MQ=255)
                                                                         aTGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCg                           <  2:1377231/100‑1 (MQ=255)
                                                                          tGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAtttttg                           >  1:70406/1‑97 (MQ=255)
                                                                              ggTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTccc                          >  2:3047445/1‑94 (MQ=255)
                                                                              ggTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcagca                      >  1:1177343/1‑100 (MQ=255)
                                                                                tCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATc                    <  1:757852/100‑1 (MQ=255)
                                                                                tCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATc                    <  1:3524869/100‑1 (MQ=255)
                                                                                      taggaaCTTATTGTCGGATGCGATGATTGCGCATTTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGTATTTTCGCAGCATCTGGCAc              <  2:555125/95‑1 (MQ=18)
                                                                                       cGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATAACATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCg                  >  1:1756972/1‑95 (MQ=255)
                                                                                         gCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTa           >  1:181488/1‑100 (MQ=255)
                                                                                         gCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCCGTGGCCCGGTAAAGGCATTTTCGCACCATCCGGCACttg           >  2:659469/1‑99 (MQ=17)
                                                                                              tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc      <  2:3158154/100‑1 (MQ=255)
                                                                                              tATTGTCGCATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc      <  1:2270388/100‑1 (MQ=255)
                                                                                                  GTCGGATGCGATGCTTGGGCATCGTATCCGACCTACGAATCGCATCGAGTCTGTAGGCCAGGTAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat  >  2:1404794‑M1/1‑100 (MQ=255)
                                                                                                  GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGga   <  1:287193‑M1/99‑1 (MQ=255)
                                                                                                  |                                                                                                   
AGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGAT  >  NC_000913/805706‑805903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.