| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 815643 | NA (NA) | 10 (0.080) | 9/166 | NT | NA | noncoding (59/97 nt) | RIP73 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP73 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | = 815689 | NA (NA) | intergenic (+142/+50) | uvrB/ybhK | exision nuclease of nucleotide excision repair, DNA damage recognition component/putative CofD superfamily transferase | |||||
Only 100 of 136 total aligned reads displayed.
AGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAA > NC_000913/815549‑815742 | aGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTg < 2:1088658/100‑1 (MQ=255) ggATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATAAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGt > 2:140441/1‑100 (MQ=255) gATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTa < 2:87788/100‑1 (MQ=255) aTAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAg < 1:2261706/100‑1 (MQ=255) aTAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAg < 1:375267/100‑1 (MQ=255) tAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAg < 1:3199451/99‑1 (MQ=255) gaagaaGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCg > 2:2686209/1‑99 (MQ=255) gaagaaGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGATTATCAGACCTACATTTTCTCCGCAATAAATTGAATATGCGCGGCATGTAgcc > 2:2547898/1‑95 (MQ=21) agaCTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAg < 1:655273/100‑1 (MQ=255) gaCTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTCCATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAgg < 2:3006484/100‑1 (MQ=255) gaCTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAgg < 2:1701586/100‑1 (MQ=255) gaCTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGACCGGAAAAg > 2:1014096/1‑99 (MQ=255) aCTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGc < 2:2920988/100‑1 (MQ=255) atgaCAAACGGAAAACAGCCTGATGCGTTACGTTTATCAGGCTTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTc < 2:211507/100‑1 (MQ=255) atgaCAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTc < 1:1020174/100‑1 (MQ=255) atgaCAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTc < 2:2867134/100‑1 (MQ=255) atgaCAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTc < 1:1301930/100‑1 (MQ=255) cAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCAcgc > 1:398446/1‑100 (MQ=255) cAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCAcgc < 1:3299908/100‑1 (MQ=255) cAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCAcgc > 2:313139/1‑100 (MQ=255) cAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCAcgc > 1:359569/1‑100 (MQ=255) cAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCAcgc > 2:3288150/1‑100 (MQ=255) cAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCAcgc > 2:1184503/1‑100 (MQ=255) aaCGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCAcgccg < 1:2241730/100‑1 (MQ=255) aaCGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCAcgccg < 1:1410396/100‑1 (MQ=255) aCGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCAcgccgc < 1:358915/100‑1 (MQ=255) cGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCa > 1:2569808/1‑100 (MQ=255) cGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCa > 1:532240/1‑100 (MQ=255) gAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATc > 1:2725832/1‑100 (MQ=255) aaaaCAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATcc < 2:2495672/100‑1 (MQ=255) aaCAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg > 1:2555019/1‑100 (MQ=255) aaCAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg < 1:3492695/100‑1 (MQ=255) atctccTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc < 1:356395/96‑1 (MQ=255) aCAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGTGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc > 2:3179435/1‑100 (MQ=255) cAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGgtttgtaggccggatgcggcgtgaacgccttatccggcc < 2:1644534‑M1/100‑40 (MQ=255) cAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa > 2:1288137/1‑100 (MQ=255) cAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa < 1:298476/100‑1 (MQ=255) aGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAt > 2:1919324/1‑100 (MQ=255) gCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATa > 1:3435232/1‑100 (MQ=255) gCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATa > 1:2889558/1‑100 (MQ=255) ccTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCagat > 2:356392/1‑97 (MQ=255) cTGATGCGCTTCGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATaaa < 2:188334/100‑1 (MQ=255) tGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAaac > 1:3500062/1‑100 (MQ=255) tGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAaac > 1:2254690/1‑100 (MQ=255) tGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAaac > 1:59664/1‑100 (MQ=255) gATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAaaca > 1:1139949/1‑100 (MQ=255) gATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAaaca < 1:1629652/100‑1 (MQ=255) tGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAATCAAc < 2:3233244‑M2/100‑2 (MQ=255) tGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAAc < 1:3589481‑M2/100‑2 (MQ=255) aCGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaa < 1:1675977‑M1/100‑54 (MQ=255) ttATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattc < 1:461828‑M1/100‑58 (MQ=255) ttATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTg > 1:28895/1‑100 (MQ=255) ttATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTg < 2:1130771/100‑1 (MQ=255) ttATCAGGCCTACATTTTCTCCCCAATATATCGAATTGGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattc < 2:2453885‑M1/100‑58 (MQ=255) tATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattag > 2:754653‑M1/1‑42 (MQ=255) aTCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTc > 1:1306476/1‑100 (MQ=255) tCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaat < 1:1982700‑M1/100‑61 (MQ=255) tCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCt < 2:1102411/100‑1 (MQ=255) cAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGAACTTTGTCtt > 1:672849/1‑100 (MQ=255) aGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTc < 2:3500807/100‑1 (MQ=255) aGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTc < 2:870327/100‑1 (MQ=255) ggCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCa > 1:879703/1‑100 (MQ=255) ggCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCa < 2:3069479/100‑1 (MQ=255) ggCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCa > 2:1085111/1‑100 (MQ=255) ggCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCa < 1:768451/100‑1 (MQ=255) ccTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAAt < 2:2030554/100‑1 (MQ=255) cTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATa > 2:2061164/1‑100 (MQ=255) tACATTTTCTCCGCAATCTATTGAATTTGCGCGGTTTGTAGGCCGTATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATa > 2:1968087/1‑99 (MQ=255) tACATTTTCTCCGCAATATATTGAATTTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaatatattgc < 1:482953‑M1/100‑68 (MQ=255) cATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGa < 1:3632862/100‑1 (MQ=255) aTTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGaa < 1:1048505/100‑1 (MQ=255) aTTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGaa < 2:328996/100‑1 (MQ=255) ttttCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGTCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAg > 1:3163759/1‑100 (MQ=255) ccGCAATCTATTGAATTTGCGCGGTTTATAGGCCGGATAAGGTGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGcagaaa > 2:681949/1‑95 (MQ=21) cGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAAt > 2:1009850/1‑100 (MQ=255) tatatTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTcc < 2:471409/100‑1 (MQ=255) tatatTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTcc < 2:43663/100‑1 (MQ=255) atatTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCt > 1:3068583/1‑100 (MQ=255) tatTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCtt > 1:519023/1‑100 (MQ=255) atTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAAcgcgcaaattcaatatattgcggagaaaatgtaggcctga < 1:1982700‑M2/100‑41 (MQ=255) ttGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAAcgcaaattcaatataatgcggagaaaatgtaggcctgat < 2:3230509‑M2/98‑40 (MQ=255) ttGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCg < 1:1865688/100‑1 (MQ=255) ttGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCg < 2:1141716/100‑1 (MQ=255) tGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCgg > 2:2521174/1‑100 (MQ=255) ctaattTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAAcgcgcaaattcaatatattgcggagaaaatgtaggcctgata > 2:754653‑M2/3‑58 (MQ=255) gAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAAcgcgccaattcgatatattggggagaaaatgtaggcctgataa < 2:2453885‑M2/100‑44 (MQ=255) gAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAAcgcgcaaattcaatatattgcggagaaaatgtaggcctgataa < 1:461828‑M2/100‑44 (MQ=255) aaTTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAAcgcgcaaattcaatatattgcggagaaaatgtaggcctgataag < 1:754657‑M2/100‑45 (MQ=255) aaTTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGAt > 2:377871/1‑100 (MQ=255) aTTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAAcgcgcaaattcaatatattgcggagaaaaggtaggcctgataagc < 1:1486046‑M2/100‑46 (MQ=255) gcgcGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCg < 2:1396722/100‑1 (MQ=255) gcgcGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCg < 1:224059/100‑1 (MQ=255) ctcgGTCTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTATCTTCAATAGGAAGCCGGAATTATCCTTCGGATTTCCGt > 2:3341661/3‑100 (MQ=25) cgcgGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGt > 1:488232/1‑100 (MQ=255) cgcgGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGt > 1:354353/1‑100 (MQ=255) cgGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTa < 1:2432676/100‑1 (MQ=255) cgGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTa > 2:3124263/1‑100 (MQ=255) gttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaatatattgcggagaaaatgtaggcctgataagcgtagcgca > 1:2975359‑M1/1‑1 (MQ=255) gttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaatatattgcggagaaaatgtaggcctgataagcgtagcgca < 2:3115351‑M1/100‑100 (MQ=255) gttgattatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaatatattgcggagaaaatgtaggcctgataagcgtagcgca < 2:3233244‑M1/100‑100 (MQ=255) | AGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAA > NC_000913/815549‑815742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |