New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994981 (0.010)116 (0.940) 72/170 NT 99.6% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Only 100 of 134 total aligned reads displayed.

CCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGT  >  NC_000913/1299400‑1299596
                                                                                                  |                                                                                                  
ccATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAa                                                                                                   >  2:1891597‑M1/1‑99 (MQ=255)
 catcatGTTATTTACGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAat                                                                                                  <  2:1357647‑M1/100‑3 (MQ=255)
  atcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAata                                                                                                 <  1:1405141‑M1/100‑4 (MQ=255)
  atcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAata                                                                                                 <  2:1148375‑M1/100‑4 (MQ=255)
    catGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataat                                                                                               >  2:2662116‑M1/1‑95 (MQ=255)
    catGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataat                                                                                               >  2:196725‑M1/1‑95 (MQ=255)
     atGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataata                                                                                              >  2:3119024‑M1/1‑94 (MQ=255)
      tGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGACTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataata                                                                                              >  2:1623337‑M1/1‑93 (MQ=255)
       gTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataa                                                                                             <  2:109226‑M1/99‑8 (MQ=255)
        ttATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatc                                                                                           <  2:2688643‑M1/100‑10 (MQ=255)
         tATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatca                                                                                          >  1:3629868‑M1/1‑90 (MQ=255)
              tCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgt                                                                                     >  2:765481‑M1/1‑85 (MQ=255)
              tCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatca                                                                                          <  2:2727802‑M1/95‑11 (MQ=255)
                  cacaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaa                                                                                 <  2:476710‑M1/100‑20 (MQ=255)
                  cacaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaa                                                                                 >  2:649560‑M1/1‑81 (MQ=255)
                  cacaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaa                                                                                 >  1:1695991‑M1/1‑81 (MQ=255)
                   acaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaat                                                                                <  1:698190‑M1/100‑21 (MQ=255)
                    tatcataATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatt                                                                               <  1:647652‑M1/99‑22 (MQ=255)
                    catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatt                                                                               <  2:3251499‑M1/100‑22 (MQ=255)
                    catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatt                                                                               >  1:44077‑M1/1‑79 (MQ=255)
                     atcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatta                                                                              >  2:647650‑M1/1‑78 (MQ=255)
                        atAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGACTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattg                                                                           <  2:720889‑M1/100‑26 (MQ=255)
                         tAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGGGCTAAataataatcaattgttaaattattgt                                                                          >  2:1918039‑M1/1‑74 (MQ=255)
                         tAATCCTAGGCTTGCTGTAGAATAAGTGAAATGATATTATTAATTCCACTGACTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaactattg                                                                           <  2:2156426‑M1/99‑26 (MQ=255)
                           agcctgGGCTTGCTGAAGAATAATTGAAATGATATGATTAATTCCACTGCCTTTGGTATAGGAAAGTGCTAAataataatcaattgttaaattattgtgc                                                                        <  1:2890112‑M1/98‑29 (MQ=255)
                           aTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgc                                                                        >  1:1535555‑M1/1‑72 (MQ=255)
                           aTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgc                                                                        >  1:1790773‑M1/1‑72 (MQ=255)
                              cTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCGCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatt                                                                     >  1:2468247‑M1/1‑69 (MQ=255)
                              cTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatt                                                                     <  1:722621‑M1/100‑32 (MQ=255)
                                gggCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttc                                                                   >  1:1976649‑M1/1‑67 (MQ=255)
                                 ggCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttca                                                                  >  1:322904‑M1/1‑66 (MQ=255)
                                 ggCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttc                                                                   <  2:2451338‑M1/99‑34 (MQ=255)
                                  gCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcac                                                                 >  1:1369447‑M1/1‑65 (MQ=255)
                                  gCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcac                                                                 >  1:2240810‑M1/1‑65 (MQ=255)
                                  gCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcac                                                                 <  2:13324‑M1/100‑36 (MQ=255)
                                  gCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcac                                                                 <  1:2154622‑M1/100‑36 (MQ=255)
                                  ccgatctgaagAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcac                                                                 <  1:3486163‑M1/95‑36 (MQ=255)
                                      gCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactact                                                             <  2:2707016‑M1/100‑40 (MQ=255)
                                         gaagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcacagatcgg                                                          >  2:3486138‑M1/1‑58 (MQ=255)
                                           agaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaac                                                        >  1:1946958‑M1/1‑56 (MQ=255)
                                            gaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcactttttaaattattgtgcatttcactactgtaact                                                       >  2:1693437‑M1/1‑55 (MQ=255)
                                            gaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                       <  1:2836074‑M1/100‑46 (MQ=255)
                                             aataatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactg                                                      <  1:3384697‑M1/100‑47 (MQ=255)
                                             aataatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactg                                                      <  1:1867349‑M1/100‑47 (MQ=255)
                                             aataatTGAAATGATATTATTAATTCCACTGACTTTGGTATAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactg                                                      <  2:1735249‑M1/100‑47 (MQ=255)
                                              ataatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactg                                                      <  2:1177605‑M1/99‑47 (MQ=255)
                                               taatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgta                                                    <  2:617067‑M1/100‑49 (MQ=255)
                                                 atTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaat                                                  >  2:3604330‑M1/1‑50 (MQ=255)
                                                  ttGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatc                                                 <  1:325709‑M1/100‑52 (MQ=255)
                                                   tGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatca                                                <  2:464071‑M1/100‑53 (MQ=255)
                                                   tGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatca                                                <  1:1618809‑M1/100‑53 (MQ=255)
                                                   tGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatca                                                <  1:2658455‑M1/100‑53 (MQ=255)
                                                   tGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgaaactgtaatca                                                >  2:1619956‑M1/1‑48 (MQ=255)
                                                    gAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcag                                               >  1:2864694‑M1/1‑47 (MQ=255)
                                                    gAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGGGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatca                                                >  2:1992054‑M1/1‑47 (MQ=255)
                                                      aaTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactacttaaactgtaataaga                                              >  2:2763701‑M1/1‑45 (MQ=255)
                                                        tGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaa                                           >  1:1896370‑M1/1‑43 (MQ=255)
                                                        tGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttaactactggaactgtaatcagaaa                                            >  2:2416689‑M1/1‑43 (MQ=255)
                                                         gATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaag                                          >  1:162121‑M1/1‑42 (MQ=255)
                                                         gATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaag                                          <  1:3169201‑M1/100‑59 (MQ=255)
                                                             ttattaATTCCACTGGCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatag                                      <  2:597730‑M1/100‑63 (MQ=255)
                                                             ttattaATTCCACTGCCTTTGGTAGAGGAAAGTTCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatag                                      <  2:520741‑M1/100‑63 (MQ=255)
                                                              tattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagataga                                     >  1:378739‑M1/1‑37 (MQ=255)
                                                              tattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagataga                                     <  1:880876‑M1/100‑64 (MQ=255)
                                                               attaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                    >  2:3342092‑M1/1‑36 (MQ=255)
                                                               attaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                    >  1:1810983‑M1/1‑36 (MQ=255)
                                                                  aaTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatg                                 >  1:519230‑M1/1‑33 (MQ=255)
                                                                  aaTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatg                                 >  2:2040919‑M1/1‑33 (MQ=255)
                                                                   aTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgc                                >  1:2027534‑M1/1‑32 (MQ=255)
                                                                     tCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgctt                              >  2:224160‑M1/1‑30 (MQ=255)
                                                                       cACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatatacatgcttag                            >  2:756473‑M1/1‑28 (MQ=255)
                                                                        aCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagc                           >  1:679284‑M1/1‑27 (MQ=255)
                                                                        aCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagc                           <  1:939591‑M1/100‑74 (MQ=255)
                                                                          tGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagc                           <  2:2513834‑M1/98‑74 (MQ=255)
                                                                           gCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaa                        <  1:2038870‑M1/100‑77 (MQ=255)
                                                                           gCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaa                        >  1:950438‑M1/1‑24 (MQ=255)
                                                                           gCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaa                        >  1:454723‑M1/1‑24 (MQ=255)
                                                                             cTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatc                      >  2:1225141‑M1/1‑22 (MQ=255)
                                                                              tttGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagattgacatgcttagccaatat                     >  2:45810‑M1/1‑21 (MQ=255)
                                                                              tttGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatct                     >  2:1529372‑M1/1‑21 (MQ=255)
                                                                               ttGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctc                    <  1:267911‑M1/100‑81 (MQ=255)
                                                                                 ggTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttatccaatctct                   >  1:1570150‑M1/1‑18 (MQ=255)
                                                                                 ggTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctcta                  >  2:1538786‑M1/1‑18 (MQ=255)
                                                                                  gTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaacgatagacatgcttagccaatctctat                 >  2:191684‑M1/1‑17 (MQ=255)
                                                                                  gTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctat                 >  2:1724856‑M1/1‑17 (MQ=255)
                                                                                  gTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaataagaaaagatagacatgcttagccaatctaaa                  >  2:2849068‑M1/1‑17 (MQ=255)
                                                                                   tAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatt                >  2:2116381‑M1/1‑16 (MQ=255)
                                                                                   tAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatt                >  1:990381‑M1/1‑16 (MQ=255)
                                                                                    agagGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctattt               <  2:1373051‑M1/100‑86 (MQ=255)
                                                                                        gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgggactgtaatcagaaaagatagacatgcttagccaatctctatgtgat            <  2:1561546‑M1/99‑89 (MQ=255)
                                                                                        gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgatt           <  1:1358130‑M1/100‑90 (MQ=255)
                                                                                        gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgatt           <  1:2967811‑M1/100‑90 (MQ=255)
                                                                                           aGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaa        >  1:3527029‑M1/1‑8 (MQ=255)
                                                                                             tGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaatt      <  1:349215‑M1/100‑95 (MQ=255)
                                                                                             tGCTAAataataatcaattgttaaaatattgtgcatctcactactggaactgtaatcagaaaagatagacatgcttagccaatccctatttgattgaatt      <  2:390653‑M1/100‑95 (MQ=255)
                                                                                               cTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattga    >  1:2999674‑M1/1‑4 (MQ=255)
                                                                                                tAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgan   <  1:1374386‑M1/100‑98 (MQ=255)
                                                                                                tAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaa   <  1:2927357‑M1/100‑98 (MQ=255)
                                                                                                 aaataataatcaattgttaaattattgtgcatttcactactgtaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaa  <  2:1492136‑M1/100‑99 (MQ=255)
                                                                                                 aaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaa  <  1:196725‑M1/100‑99 (MQ=255)
                                                                                                  |                                                                                                  
CCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGT  >  NC_000913/1299400‑1299596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.