New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2950598 =NA (NA)14 (0.120) 7/158 NT NA intergenic (+25/+37) argA/recD amino acid N‑acetyltransferase and inactive acetylglutamate kinase/exonuclease V (RecBCD complex), alpha chain
?NC_000913 2950615 = NA (NA)noncoding (3/14 nt) REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 170 total aligned reads displayed.

TTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGC  >  NC_000913/2950499‑2950697
                                                                                                   |                                                                                                   
ttACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACa                                                                                                     <  1:2950610/100‑1 (MQ=255)
  aCTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATg                                                                                                   >  1:507830/1‑100 (MQ=255)
  aCTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATg                                                                                                   <  1:1967732/100‑1 (MQ=255)
     gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGt                                                                                                >  1:3057352/1‑100 (MQ=255)
     gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGt                                                                                                >  1:1964849/1‑100 (MQ=255)
     gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGAGACATGCGt                                                                                                >  1:3523025/1‑100 (MQ=255)
      cccGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTa                                                                                               >  2:2551868/1‑100 (MQ=255)
      cacGAGAGCAACACGCAGTTGTACACCTACCAGCGGAAATCCAAAGAGTTGATGGAGGATTTAGTCTAAGCGATGAAAATCGTCGGATGCGACATGCGTa                                                                                               <  2:2906867/98‑1 (MQ=255)
       ccGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTa                                                                                               <  2:2137246/99‑1 (MQ=255)
       ccGAGAGCAAAAAGCAGTTGTACAAATACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATg                                                                                                   <  2:2292474/95‑1 (MQ=255)
          agagCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAacac                                                                                           <  2:666118/100‑1 (MQ=255)
           gagCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACt                                                                                          >  2:543013/1‑100 (MQ=255)
            agCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTc                                                                                         <  2:2236746/100‑1 (MQ=255)
             gCACAAAGCCGTTGTACAACTCCCAGCGTAAATCCCAAGTGTTGATGGAGGATTTCGGGTAAGCGATGAAACTCGTCGGAGGCTACATTCGCAACACTct                                                                                        <  2:3038771/100‑2 (MQ=255)
             gCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                        >  2:3460362/1‑100 (MQ=255)
             gCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                        >  1:3464368/1‑100 (MQ=255)
             gCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                        >  2:430765/1‑100 (MQ=255)
             gCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                        >  2:2674201/1‑100 (MQ=255)
              cAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGt                                                                                       >  2:2846322/1‑100 (MQ=255)
              cAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGt                                                                                       >  1:2687685/1‑100 (MQ=255)
              cAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTa                                                                                      >  1:1206142/1‑100 (MQ=255)
               aaaaaGCATTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTa                                                                                      <  2:1866652/100‑1 (MQ=255)
               aaaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTa                                                                                      >  2:699959/1‑100 (MQ=255)
               aaaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTa                                                                                      >  2:1825794/1‑100 (MQ=255)
                aaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTAc                                                                                     >  2:3588559/1‑100 (MQ=255)
                  aaGCAGTTGTATAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGt                                                                                   >  2:3255652/1‑100 (MQ=255)
                   aGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTc                                                                                  <  1:1123780/100‑1 (MQ=255)
                    gCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTc                                                                                  <  1:2661367/99‑1 (MQ=255)
                    gCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCg                                                                                 <  1:1606551/100‑1 (MQ=255)
                    gCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCg                                                                                 <  1:1796218/100‑1 (MQ=255)
                     cAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGc                                                                                >  1:2521941/1‑100 (MQ=255)
                     cAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGc                                                                                >  1:1520274/1‑100 (MQ=255)
                      aGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCa                                                                               >  1:1780044/1‑100 (MQ=255)
                       gTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCAt                                                                              >  1:3376183/1‑100 (MQ=255)
                         tGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATcc                                                                            >  1:2252646/1‑100 (MQ=255)
                         actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  1:2493948‑M1/75‑100 (MQ=255)
                         actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  1:2423909‑M1/75‑100 (MQ=255)
                         actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  1:986526‑M1/75‑100 (MQ=255)
                           tcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATCCgg                                                                          >  1:1056922‑M1/73‑100 (MQ=255)
                           gcgtagtgagcggcggagtggtctggcggcggtgttgagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  2:1608347‑M1/73‑98 (MQ=255)
                            cttccgatctgCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGc                                                                         <  2:1108463/90‑1 (MQ=255)
                             cAACTACCAGCGTAAATCGAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCa                                                                        <  2:2572090/100‑1 (MQ=255)
                                  aCCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTAc                                                                   >  1:1401446/1‑100 (MQ=255)
                                  aCCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTAc                                                                   >  1:2204877/1‑100 (MQ=255)
                                  aCCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTAc                                                                   >  1:484351/1‑100 (MQ=255)
                                   ccAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACg                                                                  <  2:432404/100‑1 (MQ=255)
                                   agcggtgcagtggtctggcggcggtgtttagtttacgggaataaacgtaatcgtcggatgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTa                                                                    >  2:1405332‑M1/65‑98 (MQ=255)
                                    cAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGt                                                                 >  1:2160038/1‑100 (MQ=255)
                                    cAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGt                                                                 <  2:2917815/100‑1 (MQ=255)
                                     aGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGtt                                                                <  2:1557209/100‑1 (MQ=255)
                                     aGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGtt                                                                >  1:424718/1‑100 (MQ=255)
                                     aGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGtt                                                                <  1:1922289/100‑1 (MQ=255)
                                         tAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAGATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGttt                                                               <  2:499536/97‑1 (MQ=255)
                                         tAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTAtt                                                            >  1:3029897/1‑100 (MQ=255)
                                          aaaTCCAAAGTGTAGATGTCGGTGGTCGGCGAATCATTAAAAAACAACGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTc                                                           >  2:559241/1‑100 (MQ=255)
                                            aTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTccc                                                         >  1:324907/1‑100 (MQ=255)
                                             tCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCg                                                        >  2:2741092/1‑100 (MQ=255)
                                             tCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCg                                                        >  1:770510/1‑100 (MQ=255)
                                              ccAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGt                                                       <  1:577909/100‑1 (MQ=255)
                                              ccAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGt                                                       <  2:2429436/100‑1 (MQ=255)
                                              ccAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGt                                                       >  2:945901/1‑100 (MQ=255)
                                               cAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTg                                                      >  1:2073223/1‑100 (MQ=255)
                                               cAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTg                                                      >  1:414980/1‑100 (MQ=255)
                                               cAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTg                                                      <  1:1511688/100‑1 (MQ=255)
                                               cAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTg                                                      >  1:3304578/1‑100 (MQ=255)
                                                aaaGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGa                                                     <  1:1993925/100‑1 (MQ=255)
                                                  aGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAAc                                                   <  2:3307187/100‑1 (MQ=255)
                                                      ttGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTaaa                                               >  1:2501749/1‑100 (MQ=255)
                                                        gATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaaca                                             >  2:263612/1‑100 (MQ=255)
                                                          tGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaacaac                                           >  1:1060893/1‑100 (MQ=255)
                                                          tGGCGGATGTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaacaac                                           <  1:1208221/100‑1 (MQ=255)
                                                            gCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgc                                         <  2:1060885/100‑1 (MQ=255)
                                                             cGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGAATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgcc                                        >  1:879204/1‑100 (MQ=255)
                                                             cGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACACGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgcc                                        >  2:1263855/1‑100 (MQ=255)
                                                              ggATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgccg                                       <  2:1953639/100‑1 (MQ=255)
                                                               gATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACGAAACAAcgccgc                                      <  2:1682260/100‑1 (MQ=255)
                                                                aTTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACgccgcc                                     <  1:430767/100‑1 (MQ=255)
                                                                   tAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGa                                  >  1:3073341/1‑100 (MQ=255)
                                                                     gggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGAcc                                >  2:2115648/1‑100 (MQ=255)
                                                                     gggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGAcc                                <  1:22216/100‑1 (MQ=255)
                                                                     gggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGAcc                                <  2:2385881/100‑1 (MQ=255)
                                                                     gggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGAc                                 >  2:566630/1‑99 (MQ=255)
                                                                         aaGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTg                            >  1:1805343/1‑100 (MQ=255)
                                                                         aaGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTg                            <  2:400610/100‑1 (MQ=255)
                                                                          aGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTgc                           <  1:2906649/100‑1 (MQ=255)
                                                                           gCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTgcg                          >  1:355814/1‑100 (MQ=255)
                                                                           gCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTgcg                          >  1:2915627/1‑100 (MQ=255)
                                                                            cGATGAACATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGACAGACCACTgcg                          <  2:3423236/99‑1 (MQ=255)
                                                                               tGAAAATCGTCGGATGCGACATGCGTCACACTCGTCCGTCGCATCCGGCAATTACGGTTCTTCCCGTGAACTAAACACCGCCGCCAGACCACTGcgccgc                      >  2:3359170/1‑100 (MQ=255)
                                                                               tGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGcgccgc                      >  2:1360555/1‑100 (MQ=255)
                                                                                  aaaTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTc                    >  1:2591895/1‑99 (MQ=255)
                                                                                   aaTGGTCGGATGCCACCTGCGTAACACGCGTACGGCGCACCCGGCAATTACGTTTATCCCCGTGAACTAAACAACGCCGCCAGACCACTGcgccgc                      <  2:3456292/96‑1 (MQ=255)
                                                                                     tcgtcgGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTa                <  1:2053359/100‑1 (MQ=255)
                                                                                       gtcgGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACg              <  2:2036624/100‑1 (MQ=255)
                                                                                       gtcgGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACg              >  2:759640/1‑100 (MQ=255)
                                                                                         cggatgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAg            <  2:250509‑M1/90‑1 (MQ=255)
                                                                                         cggatgcgacATGCATAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAg            >  2:1151798‑M1/11‑100 (MQ=255)
                                                                                                gacATGCGTAACACTCGTACGTCGCATCCGGCAATTAGGTTTATTCCCGTGAACTAACCAACGCCGCCAGCCCACTGCGCCGCTCAGTACGAGTGGCGa      <  2:1939039‑M1/96‑1 (MQ=255)
                                                                                                  cATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTg   <  1:3334284‑M1/99‑1 (MQ=255)
                                                                                                   aTGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGc  >  1:3421151/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGC  >  NC_000913/2950499‑2950697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.