New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3620116NA (NA)14 (0.120) 7/166 NT 100% coding (925/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3620152 0 (0.000)coding (961/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

ACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAA  >  NC_000913/3620048‑3620214
                                                                    |                                                                                                  
aCAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACG                                                                     >  1:1926419‑M2/1‑100 (MQ=255)
 cAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGC                                                                    <  2:773676‑M2/100‑1 (MQ=255)
 cAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGC                                                                    >  2:1268869‑M2/1‑100 (MQ=255)
 cAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGC                                                                    <  1:327326‑M2/100‑1 (MQ=255)
  aaCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCG                                                                   <  2:919215‑M2/100‑1 (MQ=255)
  aaCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCG                                                                   >  2:2982306‑M2/1‑100 (MQ=255)
   aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                  <  2:2350105‑M2/100‑1 (MQ=255)
   aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                  <  1:3007529‑M2/100‑1 (MQ=255)
   aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                  <  2:1006317‑M2/100‑1 (MQ=255)
   aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTAAGGCTGGACGCCAAGCGG                                                                  <  1:1345235‑M2/100‑1 (MQ=255)
    cGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGC                                                                 <  1:987636‑M2/100‑1 (MQ=255)
     ggCATCCGTCTGTCTGCCGTGTGGCTGACGCCCGACCCGGAATACCCGGAGAATTTCCCGGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCG                                                                >  2:971648‑M2/1‑100 (MQ=255)
     ggCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGCATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCG                                                                <  2:1806532‑M2/100‑1 (MQ=255)
     ggCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCG                                                                >  1:3387353‑M2/1‑100 (MQ=255)
     ggCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCG                                                                >  1:3123780‑M2/1‑100 (MQ=255)
      gCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCG                                                                <  1:1424411‑M2/99‑1 (MQ=255)
                                                         aTTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcaga            <  1:2925330‑M2/100‑53 (MQ=255)
                                                               cTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacg      <  1:1329651‑M2/100‑59 (MQ=255)
                                                                 gccgcgccgcTGGTGCGCTATGGCTGGCCGCCCCGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcacccacacggcagacagac       <  2:2001270‑M2/97‑58 (MQ=255)
                                                                 gccgcgccgcTGGTGCGCTATGGCTGGACGCCCCGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgga    <  1:1591622‑M2/100‑61 (MQ=255)
                                                                 gccgcgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgga    <  1:305239‑M2/100‑61 (MQ=255)
                                                                  ccgcgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgg     <  2:2999237‑M2/98‑60 (MQ=255)
                                                                   cgcgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacaaggcagaacgccggatg  <  1:299490‑M2/100‑63 (MQ=255)
                                                                    |                                                                                                  
ACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAA  >  NC_000913/3620048‑3620214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.