New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3622540 =	NA (NA)	30 (0.250)	9/168	NT	100%	coding (3349/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	3622556 =	0 (0.000)					coding (3365/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  >  NC_000913/3622448‑3622599                                                                                             |                                                            gccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCgctggct                                                      >  1:1244364‑M2/50‑100 (MQ=255)  gccaggatttcactttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCgctggctg                                                     >  2:2882598‑M2/49‑100 (MQ=255)   caggatttcactttccagccggtcgagcatctgcaccagaaccggccGGAAAGTGAAATCTTGGCTGCCCGGGAGAGTGAGGAAAGCCGCcgcgggctgc                                                    >  1:1178297‑M2/48‑99 (MQ=255)     ggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCa                                                  >  1:1528008‑M2/46‑100 (MQ=255)          tcactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCAGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTg                                             >  1:3465708‑M2/41‑100 (MQ=255)            ctctttccagccgatcgagcatctgcaccgtaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCg                                           >  1:2461453‑M2/39‑100 (MQ=255)            cactttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCg                                           >  1:929418‑M2/39‑100 (MQ=255)            cactttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCg                                           >  1:2587563‑M2/39‑100 (MQ=255)            actttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCg                                           >  1:3277126‑M2/39‑100 (MQ=255)             ctttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  1:480712‑M2/38‑100 (MQ=255)             ctttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  1:243302‑M2/38‑100 (MQ=255)             ctttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  1:312769‑M2/38‑100 (MQ=255)             ctttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  1:2791092‑M2/38‑100 (MQ=255)              tttccagccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGc                                         >  1:2566553‑M2/37‑100 (MQ=255)              ctttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCg                                           >  2:600963‑M2/37‑98 (MQ=255)              ctttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGc                                         >  1:1408671‑M2/37‑100 (MQ=255)              ctttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGc                                         >  2:264864‑M2/37‑100 (MQ=255)              ctctccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGc                                         >  2:1489188‑M2/37‑100 (MQ=255)               tttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTAAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGcc                                        >  1:2465606‑M2/36‑100 (MQ=255)               ttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGAAGACGCTGGCTGGCATCCAGCGGcc                                        >  1:3630226‑M2/36‑100 (MQ=255)                ttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCt                                       >  1:2699597‑M2/35‑100 (MQ=255)                tccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCt                                       >  1:2541773‑M2/35‑100 (MQ=255)                 ccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTg                                      >  1:190753‑M2/34‑100 (MQ=255)                 ccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGCTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTg                                      >  1:1713312‑M2/34‑100 (MQ=255)                  ccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGa                                     >  2:1198155‑M2/33‑100 (MQ=255)                  cagccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGa                                     >  1:525060‑M2/33‑100 (MQ=255)                  cagccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGa                                     >  2:3398804‑M2/33‑100 (MQ=255)                   agccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGAc                                    >  1:2600403‑M2/32‑100 (MQ=255)                     ccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTgacgg                                  <  2:312767‑M2/71‑3 (MQ=255)                         gtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGa                              <  2:1408663‑M2/75‑1 (MQ=255)                              catctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGa                         <  1:3398829‑M2/80‑1 (MQ=255)                                 cagatgctgcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGGGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATg                       <  2:3348403‑M2/82‑1 (MQ=255)                                                  GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCg     >  2:3607016‑M2/1‑100 (MQ=255)                                                  GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCg     >  1:2479057‑M2/1‑100 (MQ=255)                                                   GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCgg    <  2:377024‑M2/100‑1 (MQ=255)                                                   GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCgg    <  2:2046959‑M2/100‑1 (MQ=255)                                                    AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgt   <  1:596329‑M2/100‑1 (MQ=255)                                                    AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgt   >  1:671410‑M2/1‑100 (MQ=255)                                                    AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgt   >  1:463710‑M2/1‑100 (MQ=255)                                                     AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  1:1013308‑M2/100‑1 (MQ=255)                                                     AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  2:3249500‑M2/100‑1 (MQ=255)                                                     AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  2:2158318‑M2/100‑1 (MQ=255)                                                     AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  1:1467546‑M2/100‑1 (MQ=255)                                                     AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  1:814108‑M2/100‑1 (MQ=255)                                                     AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgt   <  2:1703952‑M2/99‑1 (MQ=255)                                                     AAGTGAAAGCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  2:405578‑M2/100‑1 (MQ=255)                                                                                             |                                                            GTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  >  NC_000913/3622448‑3622599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.