| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3946665 = | 143 (1.110) | 67 (0.560) | 12/166 | NT | 35.3% | intergenic (+58/‑35) | rrlC/rrfC | 23S ribosomal RNA of rrnC operon/5S ribosomal RNA of rrnC operon |
| ? | NC_000913 | 3946689 = | 112 (0.930) | intergenic (+82/‑11) | rrlC/rrfC | 23S ribosomal RNA of rrnC operon/5S ribosomal RNA of rrnC operon | |||||
Only 100 of 249 total aligned reads displayed.
CGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG > NC_000913/3946566‑3946763 | gaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtttca > 2:426771‑M1/100‑100 (MQ=255)cGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTaaa > 2:753488/1‑100 (MQ=32)cGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTaaa > 1:3027205/1‑100 (MQ=33) gTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAAt < 1:2534234/100‑1 (MQ=33) ttaaGCGAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTGTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATc < 2:2902821/97‑1 (MQ=255) ttGAGCTAACCGGTAGTAATGAACCGTGAGGCTTAACCTTACAACGACGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATc < 1:2551909/100‑1 (MQ=16) ttGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATc < 1:3492991/100‑1 (MQ=33) ttGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATc < 1:58099/100‑1 (MQ=33) ccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtttcatc > 1:2925573‑M1/98‑100 (MQ=255) ccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtttcatc > 2:3126336‑M1/98‑100 (MQ=255) ccccacaataccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtttcatc < 1:351095‑M1/3‑1 (MQ=255) tGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCa < 1:2708712/100‑1 (MQ=33) cccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtttcatca > 2:1791869‑M1/97‑100 (MQ=255) ccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtttcatca < 1:2157559‑M1/4‑1 (MQ=255) ccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtttcATCAg < 2:3073160‑M1/5‑1 (MQ=255) cacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtggtcccaccgcgctacggccgccaggcaaattctgtttcatca > 2:3458528‑M1/95‑98 (MQ=255) gCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGaa > 2:145308/1‑100 (MQ=33) gCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGaa > 1:2735914/1‑100 (MQ=33) aaCCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGc < 1:1822320/100‑1 (MQ=33) ccGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGATCggaa > 2:1625326/1‑97 (MQ=12) ccGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAg > 2:2287508/1‑100 (MQ=32) ggTACTAATGAGACGTGCGGCTGAACCTTACGACGCCGAAGATGTTTTGGCGGATGAGAGAAGAGTCTCAGCCTGATATAGATTAAATCAGAACGCAg < 2:953728/98‑1 (MQ=11) gTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAg < 1:3107266/100‑1 (MQ=32) aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTc > 1:1741479/1‑100 (MQ=33) aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTc < 1:753492/100‑1 (MQ=33) aTGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGACGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCt > 2:1324123/1‑100 (MQ=18) tGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCtg > 1:1188830/1‑100 (MQ=33) tacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCtga > 2:1244153‑M1/78‑100 (MQ=255) acggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCtgat > 1:2196476‑M1/77‑100 (MQ=255) acggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtttcATCAGAACGCAGAAGCGGTCtgat > 2:1101212‑M1/77‑100 (MQ=255) cggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTctgata > 2:2053384‑M1/76‑99 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCtgatg < 2:904285/100‑1 (MQ=35) aCCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCtgatg < 1:2591918/100‑1 (MQ=35) ggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtttcATCAGAACGCAGAAGCGGTCtgatga > 1:3279899‑M1/75‑100 (MQ=255) ggcgtttcacctctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtttcATCAGAACGCAGAAGCGGTCtgat > 2:3343147‑M1/75‑98 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCtgatga > 2:3554772/1‑100 (MQ=35) gcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGgtctgataaa > 1:2971162‑M1/74‑97 (MQ=255) gcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGgtctgataaa > 2:3055590‑M1/74‑97 (MQ=255) gcgtttcacttctgagtgcggcatggggtcaggtgggatcaccgcgctacggccgccaggcaaattctgtttcATCAGAACGCAGAAGCGGTCtgat > 2:3026171‑M1/74‑97 (MQ=255) cGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGaa > 2:1663812/1‑100 (MQ=38) gTGAGGCTTCACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATGAAATCAGAACGCAGAAGCGGTCTGATGaaa > 2:1576280/1‑100 (MQ=255) gtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAAc > 2:1930940‑M1/72‑100 (MQ=255) gtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAAc > 1:821533‑M1/72‑100 (MQ=255) gtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGAtaaaan > 1:1408253‑M1/72‑99 (MQ=255) gtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAAc > 2:2605364‑M1/72‑100 (MQ=255) tttcacttctgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAAc > 2:1387407‑M1/71‑99 (MQ=255) tttcacttctgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACa > 1:2486449‑M1/71‑100 (MQ=255) tttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACa > 1:3205532‑M1/71‑100 (MQ=255) tttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACa > 1:1967175‑M1/71‑100 (MQ=255) ttcacttctgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACAg > 1:3412086‑M1/70‑100 (MQ=255) ttcacttctgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACAg > 1:1286954‑M1/70‑100 (MQ=255) ttcacttctgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACAg > 2:1754273‑M1/70‑100 (MQ=255) ttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACAg > 1:1475763‑M1/70‑100 (MQ=255) ttcacttctgagttcggcagggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACAg > 1:66870‑M1/70‑100 (MQ=255) tcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACa > 1:2625920‑M1/69‑98 (MQ=255) gCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGaa < 1:926582/100‑1 (MQ=38) aCCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGc > 2:28199/1‑100 (MQ=38) ttACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTg < 1:2767347/100‑1 (MQ=38) ncAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTggc > 2:2518856/2‑100 (MQ=38) cAACGCCGAAGTTGTTTTGTTGGATGAGAGAATATTTTCAGCGTGATACAGATTAAATCACAACGGAGAAGAGGTCTGATGAAACATAATTTGcgt > 2:1202742/1‑94 (MQ=11) ccGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGt > 2:2801149/1‑100 (MQ=38) gAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAg < 2:1914783/100‑1 (MQ=38) gAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAg < 1:3185024/100‑1 (MQ=38) aGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAgcg > 2:1515483/1‑100 (MQ=38) aTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGcgcg > 1:1024429/1‑100 (MQ=35) aTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGcgcg < 2:18937/100‑1 (MQ=35) tGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCgg > 1:1592887/1‑100 (MQ=32) tGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTAGCGGCCGTAGCGCgg < 1:521869/100‑1 (MQ=18) ttttGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCggtn < 1:1773608/100‑2 (MQ=17) tttGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCggtgg < 2:1651251/100‑1 (MQ=33) ttGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCggtggt < 1:1111408/100‑1 (MQ=33) ttGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCggtggt > 2:1286567/1‑100 (MQ=33) ggCGGATGAGAGAGGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTcc > 1:2448445/1‑100 (MQ=17) ggCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTcc > 1:802344/1‑100 (MQ=33) nggATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCa > 1:2054033/2‑100 (MQ=18) ggATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc > 1:2310240/1‑100 (MQ=33) agagaAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAc > 1:620201/1‑100 (MQ=33) gagaAGATTTTCAGCCTGATACAGATTAAATCAGAACTCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAcc < 2:2448428/100‑1 (MQ=18) gagaAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAcc > 2:1558515/1‑100 (MQ=33) gagaAGATTGTCAGCCTGATACAGATGAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTTCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAc < 2:2390399/99‑1 (MQ=255) aagaTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCa < 1:1134419/100‑1 (MQ=33) ttttCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGcc > 1:1851585/1‑100 (MQ=33) ttttCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGc < 1:3356559/99‑1 (MQ=32) tttCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCg < 1:438410/100‑1 (MQ=33) ttCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGa > 2:2695288/1‑100 (MQ=33) cAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGaan < 2:3428126/100‑2 (MQ=18) gCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTc > 2:603406/1‑100 (MQ=33) cTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAg < 2:1837368/100‑1 (MQ=33) gATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTGCCACCTGACACCATGCCGAACTCAGaa > 2:2315035/1‑100 (MQ=12) gATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGaa > 1:2816990/1‑100 (MQ=33) aTACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACTTGACCCCATGCCGAACTCAGAAg < 1:3058065/100‑1 (MQ=18) aTACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAg < 2:2997575/100‑1 (MQ=33) cAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGa < 2:3257968/100‑1 (MQ=33) cAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGa < 1:1392025/100‑1 (MQ=32) aGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa < 1:2332972/100‑1 (MQ=33) cttccgATCTGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaaa > 1:1365331‑M1/7‑100 (MQ=255) aTTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAc > 1:989542/1‑100 (MQ=33) aaaTCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGcc > 2:2157545/1‑100 (MQ=32) aaaTCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGCCGGCCGTAGCGCGGTGGTCCCACCTGACCCCACGCCGAACTCAGAAGTGAAACGcc > 1:1579247/1‑100 (MQ=12) aaTCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCg < 2:2726230/100‑1 (MQ=32) | CGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG > NC_000913/3946566‑3946763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |