New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4415962 =NA (NA)9 (0.070) 5/166 NT NA noncoding (5/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4415992 = NA (NA)intergenic (+92/+25) aidB/yjfN DNA alkylation damage repair protein; flavin‑containing DNA binding protein, weak isovaleryl CoA dehydrogenase/DUF1471 family periplasmic protein

Only 100 of 193 total aligned reads displayed.

ATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTG  >  NC_000913/4415863‑4416061
                                                                                                   |                                                                                                   
ggtaccgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatg                                                                                                     <  1:177201‑M1/1‑1 (MQ=255)
  taccgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGcc                                                                                                   >  1:1248717‑M1/98‑100 (MQ=255)
   tATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCg                                                                                                  <  2:3399108/100‑1 (MQ=255)
    ccgcattattacgatggacgaagacgagcagcctgataactggagcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCgg                                                                                                 <  2:3612774‑M1/5‑1 (MQ=255)
    ccgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCgg                                                                                                 <  2:1711930‑M1/5‑1 (MQ=255)
    ccgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgataccgtctgcatgagtgtcatctacagcaaatcaacaatGCCgg                                                                                                 <  2:3173117‑M1/5‑1 (MQ=255)
    aTTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCgg                                                                                                 <  1:3198818/100‑1 (MQ=255)
    aTTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCgg                                                                                                 <  2:1049222/100‑1 (MQ=255)
     cgcattattaccatgtacgaaaaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGa                                                                                                <  2:227543‑M1/6‑1 (MQ=255)
          gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg                                                                                           <  1:664557/100‑1 (MQ=255)
           cGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgc                                                                                          <  2:1156649/100‑1 (MQ=255)
           cGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgc                                                                                          >  1:3484491/1‑100 (MQ=255)
            gggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgcg                                                                                         >  1:1811817/1‑100 (MQ=255)
            gggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgcg                                                                                         >  1:2164152/1‑100 (MQ=255)
             ggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgcgc                                                                                        <  1:1516021/100‑1 (MQ=255)
                gACGGGGGGAGTGTGTGTGTAAGCGTATACGAATGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc                                                                                      <  2:1340072/99‑1 (MQ=255)
                  cGGGGGGAGTGTGTGTATAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcgcg                                                                                   >  2:489128/1‑100 (MQ=255)
                   ggggggAGTGTTTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCt                                                                                       <  2:1494283/95‑1 (MQ=255)
                   ggggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCgcgc                                                                                  >  2:2144359/1‑100 (MQ=255)
                    gggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgcc                                                                                 >  2:3570140/1‑100 (MQ=255)
                      gggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccgc                                                                               >  1:3374004/1‑100 (MQ=255)
                       ggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCa                                                                              >  2:2483454/1‑100 (MQ=255)
                            gcgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACACGGCGCTCGCGCCGCATCCgg                                                                         <  2:2216545/98‑1 (MQ=255)
                             tgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGc                                                                        <  1:2646966/100‑1 (MQ=255)
                             caggagtctgataactggcgcgtacaggcgatactgtatgcaggagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGc                                                                        >  2:1978638‑M1/71‑100 (MQ=255)
                              gtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCa                                                                       <  1:149719/100‑1 (MQ=255)
                               tgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGCAAATTGTAGGCCGGACAAGGCGCCCGCGCCGCATACGGc                                                                        >  2:3376223/1‑98 (MQ=255)
                               gcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCAt                                                                      >  1:2828012‑M1/69‑100 (MQ=255)
                                gtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATCAACTAAATGAAATATGTGATAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                     <  2:1987631/100‑1 (MQ=255)
                                 agcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                    >  2:3524908‑M1/67‑100 (MQ=255)
                                  gcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                   >  1:730627‑M1/66‑100 (MQ=255)
                                   tAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                  <  1:870550/100‑1 (MQ=255)
                                     aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTCAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                 <  2:2752928/99‑1 (MQ=255)
                                      gCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAt                                                               >  1:2989727/1‑100 (MQ=255)
                                         tataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTg                                                            >  2:1012353/1‑100 (MQ=255)
                                          ataCGACTGATGCGACGCTGGTTTGGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCAGCCGGCATTGTTCATTTGc                                                           <  2:2799761/100‑1 (MQ=255)
                                           taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                          <  1:3469868/100‑1 (MQ=255)
                                           taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                          >  2:531993/1‑100 (MQ=255)
                                            aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                         >  2:627061/1‑100 (MQ=255)
                                              gACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTa                                                       >  2:3547153/1‑100 (MQ=255)
                                              gACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTa                                                       >  1:3646315/1‑100 (MQ=255)
                                               aCTGATGGGACGCTGGTTTCGATTAAGTAAATGGAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTa                                                       <  2:3163709/99‑1 (MQ=255)
                                                  gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                   <  1:3258587/100‑1 (MQ=255)
                                                  gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                   >  1:1711938/1‑100 (MQ=255)
                                                    tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                 <  2:72867/100‑1 (MQ=255)
                                                    tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                 <  1:1012361/100‑1 (MQ=255)
                                                    tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                 >  1:1007631/1‑100 (MQ=255)
                                                      cGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                               <  1:6998/100‑1 (MQ=255)
                                                      cGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                               <  2:253324/100‑1 (MQ=255)
                                                      cGACGCTGGTTTCGATTAACTAAATGAAATATCTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                               <  2:2983672/100‑1 (MQ=255)
                                                         cGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCa                                            <  1:3474681/100‑1 (MQ=255)
                                                           cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTGATTTGCTGTAGATGACACTCATg                                          >  1:2036336/1‑100 (MQ=255)
                                                           cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                          >  1:259447/1‑100 (MQ=255)
                                                             ngTTTCGATTAACGAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                         >  2:2255647/2‑99 (MQ=255)
                                                              gTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                        <  2:1459783/99‑1 (MQ=255)
                                                              gTTTCGATTAACTAAATGAAATATGTGAAAAATGTAAGCCGGACAAGACGCTCGAGCTGCATACGGCATTGTTCATTTGCTGTAGATGACACTCATGCAt                                       >  2:358634/1‑100 (MQ=255)
                                                               tttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATa                                      <  1:1867996/100‑1 (MQ=255)
                                                               tttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATa                                      <  2:259446/100‑1 (MQ=255)
                                                                ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                     <  1:2777856/100‑1 (MQ=255)
                                                                 tCGATTAGCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGAAGATGACACTCATGCATACa                                    <  2:3264564/100‑1 (MQ=255)
                                                                  cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                   <  2:1611514/100‑1 (MQ=255)
                                                                     ttAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCACCGCATCCGGCATTGTGCATTTGCTGTAAATGACACTCATGCATACAGt                                  >  2:41969/1‑98 (MQ=255)
                                                                       aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                              >  1:296846/1‑100 (MQ=255)
                                                                        aCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGc                             >  2:2344727/1‑100 (MQ=255)
                                                                        aCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTATTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                              >  2:1665356/1‑99 (MQ=255)
                                                                           aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATTCATACAGTATCGCCTg                          <  1:2344743/100‑1 (MQ=255)
                                                                           aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                          >  2:1784790/1‑100 (MQ=255)
                                                                           aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                          <  1:2563198/100‑1 (MQ=255)
                                                                            aaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGt                         >  1:615508/1‑100 (MQ=255)
                                                                             aTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTa                        >  1:2743338/1‑100 (MQ=255)
                                                                              tGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAc                       <  2:3439391/100‑1 (MQ=255)
                                                                              tGAAATATGTCAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGAAGATGACACTCATGCATACAGTATCGCCTGTAc                       <  2:2399776/100‑1 (MQ=255)
                                                                               gAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg                      <  1:3163037/100‑1 (MQ=255)
                                                                               gAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg                      >  1:3273053/1‑100 (MQ=255)
                                                                                 aaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgcg                    <  1:2144373/100‑1 (MQ=255)
                                                                                   tatGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGcc                  >  1:3590463/1‑100 (MQ=255)
                                                                                    atGGGAAAATTGTAGTCCTGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCa                 <  2:2472212/100‑1 (MQ=255)
                                                                                     tgtgAAAATTGTAGGGCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTGATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACgcgc                   >  2:3123308/1‑97 (MQ=255)
                                                                                     tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                <  2:2896204/100‑1 (MQ=255)
                                                                                     tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                >  1:109783/1‑100 (MQ=255)
                                                                                      gtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGt               <  1:491175/100‑1 (MQ=255)
                                                                                      gtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGt               >  1:2279579/1‑100 (MQ=255)
                                                                                       tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGtt              >  1:958478/1‑100 (MQ=255)
                                                                                       tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGtt              >  1:1132817/1‑100 (MQ=255)
                                                                                       tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGtt              <  2:3373979/100‑1 (MQ=255)
                                                                                        gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa             >  1:3052545/1‑100 (MQ=255)
                                                                                        gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa             >  1:3327796/1‑100 (MQ=255)
                                                                                        gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa             <  1:224416/100‑1 (MQ=255)
                                                                                        gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa             >  1:3052316/1‑100 (MQ=255)
                                                                                        gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa             >  1:2888556/1‑100 (MQ=255)
                                                                                        gAAAATTGTAGGCCGGACAAGGCGCGCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa             <  1:817918/100‑1 (MQ=255)
                                                                                         aaaaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTAt            <  2:2872923/100‑1 (MQ=255)
                                                                                           aaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCa          <  1:627063/100‑1 (MQ=255)
                                                                                            aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAg         >  1:495111/1‑100 (MQ=255)
                                                                                            aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAg         <  1:2483470/100‑1 (MQ=255)
                                                                                            aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAg         <  1:3280734/100‑1 (MQ=255)
                                                                                               gTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgct      >  2:1281855/1‑100 (MQ=255)
                                                                                                  ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCCGTTATCAGgctgct   >  2:510828/1‑100 (MQ=255)
                                                                                                  ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct   >  1:1344145/1‑100 (MQ=255)
                                                                                                  ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct   >  2:748855/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTG  >  NC_000913/4415863‑4416061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.