| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 349852 | 114 (0.880) | 27 (0.230) | 9/164 | NT | 19.8% | noncoding (248/365 nt) | REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences | REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences |
| ? | NC_000913 | = 349869 | 114 (0.960) | noncoding (265/365 nt) | REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences | REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences | |||||
Only 100 of 167 total aligned reads displayed.
GCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGA > NC_000913/349770‑349968 | tCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCatc > 1:720277‑M2/1‑97 (MQ=255) gCATCCGACGACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCatccg > 2:3358248‑M2/1‑95 (MQ=255) gCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCatccg > 1:3573974‑M2/1‑95 (MQ=255) gCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCatccg > 2:1212959‑M2/1‑95 (MQ=255) cATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCatccga < 1:128936‑M2/100‑7 (MQ=255) aTCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCatccgac < 2:238539‑M2/100‑8 (MQ=255) aTCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCatccgac > 2:1364741‑M2/1‑93 (MQ=255) ccGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACaa > 2:1654230/1‑100 (MQ=32) cGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAAc > 1:617953/1‑100 (MQ=33) gACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCATGCGTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAAca < 2:2564721/100‑2 (MQ=9) gACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAAcc < 1:150413/100‑1 (MQ=32) aaCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAAcactc > 2:3074436/1‑96 (MQ=14) ccGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATg < 2:1760098/99‑1 (MQ=33) ccGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATg < 2:1824364/99‑1 (MQ=32) ccGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGc > 1:1643953/1‑100 (MQ=33) ccGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAGATGc > 2:1514569/1‑100 (MQ=17) cGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGcc < 1:1616601/100‑1 (MQ=33) ccTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATg > 1:2244225/1‑100 (MQ=33) gATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGacg > 2:2768480/1‑95 (MQ=18) aTGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGcgcc < 1:3226982/100‑1 (MQ=33) gcgcCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGcgccgc < 1:2685953/100‑1 (MQ=33) gcgcCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGcgccgc < 2:1028638/100‑1 (MQ=32) cgtcgcTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGGATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCt > 2:485612/4‑100 (MQ=2) cgccgcTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGCTAAGACGCATCGCGTCGCATCCGACAACCGCTGCCTGATGcgcc > 2:2960566/1‑97 (MQ=255) cgccgcTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCt < 2:372040/100‑1 (MQ=32) gccgcTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTg > 1:801797/1‑100 (MQ=33) ccgcTGACGCGACTTATCAGGCCTACGGGGAGCACTGAACTGTAGGCCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCACCGCTGa > 1:3334144/1‑100 (MQ=255) gcTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGAcg < 2:1130310/100‑1 (MQ=17) gcTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGAcg < 1:202978/100‑1 (MQ=33) tGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGAcgcg < 1:1001136/100‑1 (MQ=33) aCGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGAc < 2:2358584/100‑1 (MQ=32) aCGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGAc < 1:1355245/100‑1 (MQ=33) cgACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTa < 1:2896550/100‑1 (MQ=11) tATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCatccgacctacagttcagtgcaccccgtaggcctaataagtaacg < 2:2385103‑M2/100‑46 (MQ=255) ggggTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGTCGCGACTTATCAGGCCTACGGGGtga < 1:2214791/100‑1 (MQ=11) ggggTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGtga > 1:2514596/1‑100 (MQ=11) gggTGCACTTAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGtgaa < 1:3350731/100‑1 (MQ=14) gggTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGtgaa > 1:55022/1‑100 (MQ=31) gggTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGACGCTGACACGACTTATCAGGCCTACGGGGtgaa > 2:120027/1‑100 (MQ=9) ggTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGtgaac > 1:3623694/1‑100 (MQ=32) gTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGtgaact < 1:2625176/100‑1 (MQ=32) gCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGtgaactga > 2:2884749/1‑100 (MQ=33) cACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGcgaactgaa > 2:1907178/1‑100 (MQ=17) aCTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACggggagctcggaa > 1:375119/1‑90 (MQ=0) aCTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGtgaactgaac < 1:3181730/100‑1 (MQ=33) aCTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGtgaactgaac < 2:1512459/100‑1 (MQ=33) aCTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGtgaactgaac < 1:1525956/100‑1 (MQ=33) aCTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGtgaactgaac < 2:966715/100‑1 (MQ=33) cTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGtga < 2:3003139/92‑1 (MQ=11) cTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTgaactgaact < 2:2665602/100‑1 (MQ=33) tGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGaactgaactg < 1:2302723/100‑1 (MQ=32) gAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGt < 1:966033/100‑1 (MQ=33) gAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCGGACGCGACTTATCAGGCCTACGGGGcgaactgaac > 2:3207884/1‑97 (MQ=12) aaCTGTAGGTCGAATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGt < 2:1352778/99‑1 (MQ=18) aaCTGTAGGTCCGATAAGACGCATAGCGTCGCATCCGACAAACGATGCCTGATAAGCCGCTACCACAACTAATCAGACCCACGGGGcaaactgaa > 2:1064222/1‑95 (MQ=2) aCTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGTGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAg < 1:1460678/100‑1 (MQ=18) cTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAgg < 1:807105/100‑1 (MQ=32) cTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAgg < 1:2960589/100‑1 (MQ=33) gTAGGTCGGATAAGATGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTc < 1:3596391/100‑1 (MQ=18) tAGGTCGGATAAGACGGATGGCGTCGCatccgacctacagttcagtgcacctcgtaggcctgataagtcgcgtcagcgacgcatcaggcatcggctgtcg < 2:2040373‑M2/100‑74 (MQ=255) cttccgatctaGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCgg < 2:280093/90‑1 (MQ=255) aGGTCGGATAAGACGGATGGCGTCGCatccgacctacagttcagtgcacctcgtaggcctgataagtcgcgtcagcgacgcatcaggcatcggctgtcga < 1:3401265‑M2/100‑75 (MQ=255) ggTCGGATAAGACGGATGGCGTCGCatccgacctacagttcagtgcacctcgtaggcctgataagtcgcgtcagcgacgcatcaggcatcggctgtcgaa < 2:3298116‑M2/100‑76 (MQ=255) ggTCGGATAAGACGCATAGCGTCGCatccgacctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcgga < 1:1810794‑M2/100‑76 (MQ=255) ggTCGGATAAGACGCATAGCGTCGCatccgacctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcgga < 1:1733588‑M2/100‑76 (MQ=255) ggTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGa > 2:292846/1‑100 (MQ=32) gTCGGATAAGACGCATAGCGTCGCatccgacctacagttcagttcaccccgtaggcctgataagtcgcgtcagcgacgcatcaggcatcggctgtcg < 2:2214770‑M2/97‑74 (MQ=255) gTCGGATAAGACGCATAGCGTCGCatccgacctacagttcagtgcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggat < 1:1994164‑M2/100‑77 (MQ=255) gTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGAt > 1:1148949/1‑100 (MQ=33) gTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGAt > 1:1893320/1‑100 (MQ=32) cGGATAAGACGCATAGCGTGGCATCCTACAACCGTTGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATa < 2:847071/99‑1 (MQ=255) cGGATAAGACGCATAGCGTCTTatccgacctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgc < 1:3107929‑M2/100‑79 (MQ=255) cGGATAAGACGCATAGCGTCGCatccgacctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgc < 2:738306‑M2/100‑79 (MQ=255) cGGATAAGACGCATAGCGTCGCatccgacctacagttcagtgcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgt < 1:1592017‑M2/100‑79 (MQ=255) cGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATaa < 2:2910780/100‑1 (MQ=33) ggATAAGACGGATGGCGTCGCatccgacctacagttcagtgcacctcgtaggcctgataagtcgcgtcagcgacgcatcaggcatcggctgtcgaatac < 2:3152268‑M2/99‑79 (MQ=255) ggATAAGACGCATAGCGTCGCatccggcctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgcg < 1:2215988‑M2/100‑80 (MQ=255) ggATAAGACGCATAGCGTCGCatccgacctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgcg < 2:2719436‑M2/100‑80 (MQ=255) ggATAAGACGCATAGCGTCGCatccgacctacagttcagtgcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgcg < 1:2638793‑M2/100‑80 (MQ=255) gATAAGACGCATAGCGTCGCatccgacctccagttcagtgcaccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcgaatacaa < 2:606760‑M2/100‑81 (MQ=255) gATAAGACGCATAGCGTCGCatccgacctacagttcagtgcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgcga < 2:793491‑M2/100‑81 (MQ=255) gATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGa > 2:3464215/1‑100 (MQ=33) tAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACg > 1:1971337/1‑100 (MQ=33) tAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACg > 1:2352638/1‑100 (MQ=33) aGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGagatcgga > 1:280095/1‑91 (MQ=12) aGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCa > 2:1027333/1‑100 (MQ=32) aCGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATa < 1:349377/100‑1 (MQ=33) aCGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATa < 1:482084/100‑1 (MQ=33) gCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTATGGGGCGAACTGAACTGTAGGTCGGATAAGACGCATAGc > 2:2225242/1‑100 (MQ=12) cATAGCGTCGCatccgacctacagttcagtgcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgcgacgctatgcg < 1:1389588‑M2/100‑90 (MQ=255) tAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTc > 2:3101202/1‑100 (MQ=32) gCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGCCTTATCAGGCCTACGGGGTAAACTGAACTGTACGCCGCATAAGACTCATAGc > 2:1314605/1‑95 (MQ=11) gCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCg < 1:1095159/99‑1 (MQ=33) cGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCa > 2:3367553/1‑100 (MQ=32) cGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCa > 2:1725365/1‑100 (MQ=32) gTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCa < 2:1972718/99‑1 (MQ=33) gTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCAt > 1:1217406/1‑100 (MQ=33) tCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATc < 2:3368398/100‑1 (MQ=33) cATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGa > 1:1820874/1‑100 (MQ=32) cATCCGACAACCGATGACTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCg < 1:1171321/99‑1 (MQ=18) | GCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGA > NC_000913/349770‑349968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |