New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 361887 =NA (NA)16 (0.130) 9/164 NT NA noncoding (5/34 nt) REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 361917 = NA (NA)intergenic (‑57/+9) lacA/lacY thiogalactoside acetyltransferase/lactose permease

Only 100 of 225 total aligned reads displayed.

ATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAGCGC  >  NC_000913/361818‑362015
                                                                                                   |                                                                                                  
 tAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACat                                                                                                   <  1:786653/100‑1 (MQ=255)
 cgcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatgtcggataaggcgctcgcgccgcatccgacat                                                                                                   <  1:2151366‑M2/2‑1 (MQ=255)
 cgcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACat                                                                                                   >  1:644335‑M1/69‑100 (MQ=255)
  aGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACatt                                                                                                  >  1:2199877/1‑100 (MQ=255)
  aGCTGGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACatt                                                                                                  <  2:1180135/100‑1 (MQ=255)
   gctcttccgatctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattg                                                                                                 <  1:3353902/90‑1 (MQ=255)
     tagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACattgat                                                                                               >  1:3397307‑M1/65‑100 (MQ=255)
      tGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgatt                                                                                              >  2:3596183/1‑100 (MQ=255)
      agcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACattgatt                                                                                              >  2:2884240‑M1/64‑100 (MQ=255)
       gcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACattgattg                                                                                             >  1:559338‑M1/63‑100 (MQ=255)
       gCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgattg                                                                                             <  2:2286350/100‑1 (MQ=255)
       gCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgattg                                                                                             >  1:672755/1‑100 (MQ=255)
        ccTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGc                                                                                            <  1:864278/100‑1 (MQ=255)
        ccTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGc                                                                                            <  1:1011194/100‑1 (MQ=255)
        ccTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGc                                                                                            <  1:3259760/100‑1 (MQ=255)
          tggactTATTGTTTCGGTCATTGGCATTTTCAATGCGATCTCTCCGTTATGTTATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgattg                                                                                             <  2:2015810/93‑1 (MQ=37)
            ctctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTaa                                                                                        >  1:2150967/1‑100 (MQ=255)
             tctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAg                                                                                       <  1:68402/100‑1 (MQ=255)
              ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                                                      >  1:1877792/1‑100 (MQ=255)
              ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                                                      >  1:159702/1‑100 (MQ=255)
              ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCAGACATTGATTGCATAAGc                                                                                      >  2:760533/1‑100 (MQ=255)
              ctTATTCTTTAGGTCATTTGCATGTTAAATGCGATCACTCCGTTTTGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                                                      <  2:2396505/100‑1 (MQ=38)
               ttATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCg                                                                                     <  2:331971/100‑1 (MQ=255)
               ttATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCg                                                                                     <  2:709933/100‑1 (MQ=255)
                  ttCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACt                                                                                  <  1:2624523/100‑1 (MQ=255)
                   tCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACtt                                                                                 <  1:3077112/100‑1 (MQ=255)
                      ttCGGTGATTTGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttca                                                                               <  2:1306505/99‑1 (MQ=255)
                        cGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGCCATTGATTGCTTAAGCGACttcattc                                                                            >  1:1071362/1‑100 (MQ=255)
                        cGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcattc                                                                            >  2:2512968/1‑100 (MQ=255)
                         ggTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcattca                                                                           >  2:2870396/1‑100 (MQ=255)
                           tCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                                                         <  2:2753367/100‑1 (MQ=255)
                              ttGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTga                                                                      >  1:3081368/1‑100 (MQ=255)
                                ggCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgacg                                                                    <  1:2716402/100‑1 (MQ=255)
                                ggCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgacg                                                                    <  2:1505371/100‑1 (MQ=255)
                                ggCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgacg                                                                    >  2:790104/1‑100 (MQ=255)
                                 gCATGTTCAATGCGATCACTCCGTTATGACATGTTGGTCGGCTACGGCGCTCGCGCCGCCTCCGACACTGCCTGCTTAAGCGACTTCCTTCACCTcacga                                                                   >  2:382501/1‑100 (MQ=255)
                                  cATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgacgac                                                                  >  1:2553968/1‑100 (MQ=255)
                                  cATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgacgac                                                                  <  2:773168/100‑1 (MQ=255)
                                     gTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgca                                                               >  2:403507/1‑100 (MQ=255)
                                     gTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgca                                                               <  2:93494/100‑1 (MQ=255)
                                       tCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgcagc                                                             >  1:1680853/1‑100 (MQ=255)
                                       caggtgaatgaagtcgcttaagcaatcaatgtcggataaggcgctcgcgccgcatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACgcagc                                                             <  1:3260139‑M2/40‑1 (MQ=255)
                                        cAATGCGATCACTCCGTTATGATATGTTGGTCGGATACGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgac                                                                     >  2:3193390/1‑91 (MQ=255)
                                          aTGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAgg                                                          <  2:1761828/100‑1 (MQ=255)
                                           tGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAggg                                                         <  1:570828/100‑1 (MQ=255)
                                             cGATCTATCCGTTTTGATATGTTTGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTTGCCTGACGACGCAGCAggg                                                         <  2:1388639/98‑1 (MQ=37)
                                             cGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGTGACTTCATTCACCTGACGACGCAGCAGGGaa                                                       >  2:1850724/1‑100 (MQ=255)
                                             cGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGaa                                                       >  1:3461916/1‑100 (MQ=255)
                                                tCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGc                                                    <  1:760980/100‑1 (MQ=255)
                                                tCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGc                                                    >  2:678988/1‑100 (MQ=255)
                                                tCACTCCGTTATGATATGTTGGTCGGATAAGACGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGc                                                    >  1:2451267/1‑100 (MQ=255)
                                                   cTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCggg                                                 >  1:948677/1‑100 (MQ=255)
                                                   cTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCggg                                                 >  2:3188565/1‑100 (MQ=255)
                                                   cTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCggg                                                 >  2:2799126/1‑100 (MQ=255)
                                                   cTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCggg                                                 <  1:3168270/100‑1 (MQ=255)
                                                   cTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgg                                                  <  1:2174692/99‑1 (MQ=255)
                                                     ccGTTATGATATGTTGGTAGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAGGAGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgg                                                  >  2:1639077/1‑97 (MQ=255)
                                                         tATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccgggg                                           <  1:2799146/100‑1 (MQ=255)
                                                           tGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggcc                                         <  1:1309011/100‑1 (MQ=255)
                                                            gATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggccg                                        >  2:625741/1‑100 (MQ=255)
                                                              tatGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCt                                      >  1:1041051/1‑100 (MQ=255)
                                                              aatcaatgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCt                                      >  1:3475942‑M2/38‑100 (MQ=255)
                                                               atcaatgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCAGCGGCCGCt                                      >  2:2893081‑M2/37‑99 (MQ=255)
                                                               atGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGc                                       <  2:1586709/98‑1 (MQ=38)
                                                               atGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACAGTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTa                                     >  2:1938774/1‑100 (MQ=255)
                                                                 gTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttc                                   <  1:2940743/100‑4 (MQ=38)
                                                                 gTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttc                                   <  1:449998/100‑4 (MQ=38)
                                                                 gTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttc                                   <  1:1695147/100‑4 (MQ=38)
                                                                 gTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttc                                   <  2:2466299/100‑4 (MQ=38)
                                                                  aatgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGc                                  >  2:1559719‑M2/34‑100 (MQ=255)
                                                                   tGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                 <  2:3277224/100‑1 (MQ=255)
                                                                   tGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttccc                                 <  2:1831437/100‑6 (MQ=38)
                                                                   tGGTCGGATAAGGCGCTCGCGCCGCACCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                 <  2:3206923/100‑1 (MQ=255)
                                                                   atgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCCCCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                 >  2:2759599‑M2/33‑100 (MQ=255)
                                                                   atgtcggatgcggcgcgagcgccttatccgacATTGATCGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                 >  2:1874574‑M2/33‑100 (MQ=255)
                                                                    tgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGt                                >  1:126792‑M2/32‑100 (MQ=255)
                                                                     GTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                               >  1:1371050‑M1/1‑100 (MQ=255)
                                                                      tCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttccctgc                              <  2:3168489/100‑9 (MQ=37)
                                                                      TCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGa                              >  2:139465‑M1/1‑100 (MQ=255)
                                                                       CGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGaa                             >  1:654245‑M1/1‑100 (MQ=255)
                                                                       CGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGaa                             >  1:3032547‑M1/1‑100 (MQ=255)
                                                                         GATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCCTTCACCTGACGACGCAGCAGGGAAAGCGCGCCGGGGCCACTAAGCGTGAaca                           <  2:1248060‑M1/100‑1 (MQ=255)
                                                                           TAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAGCACg                         <  1:2422036‑M1/100‑1 (MQ=255)
                                                                           TAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACg                         >  1:1565111‑M1/1‑100 (MQ=255)
                                                                           TAAGGCGCTCGCGCCGCATCCGACATTGATTGATTAAGCTACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACg                         >  2:2553952‑M1/1‑100 (MQ=255)
                                                                             aGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGa                       >  2:3454552/1‑100 (MQ=255)
                                                                               gcgcTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGaaa                     <  1:3063542/100‑1 (MQ=255)
                                                                                cgcTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAAt                    >  1:2892056/1‑100 (MQ=255)
                                                                                 gcTCGCGACGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAAtt                   >  1:1910525/1‑100 (MQ=255)
                                                                                    cgcgCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAg                >  1:1506618/1‑100 (MQ=255)
                                                                                     gcgcCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAgg               <  1:125853/100‑1 (MQ=255)
                                                                                     gcgcCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAgg               <  1:1802934/100‑1 (MQ=255)
                                                                                      cgccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAgg               >  2:2333189/1‑99 (MQ=255)
                                                                                      cgccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGt              <  1:2381871/100‑1 (MQ=255)
                                                                                      cgccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGt              <  1:2126321/100‑1 (MQ=255)
                                                                                         cgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGaa           <  1:1624690/100‑1 (MQ=255)
                                                                                          gcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAAAACGGAAATTAAGGTGAAg          >  2:307933/1‑100 (MQ=255)
                                                                                             tccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGccc       >  1:121022‑M2/7‑100 (MQ=255)
                                                                                                 acATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAgcg   <  1:3596210‑M2/98‑1 (MQ=255)
                                                                                                 acATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAgcg   <  2:574736‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                  
ATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAGCGC  >  NC_000913/361818‑362015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.