| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1167402 = | NA (NA) | 15 (0.130) | 9/162 | NT | NA | noncoding (1/30 nt) | REP103 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP103 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 1167432 = | NA (NA) | intergenic (+43/‑167) | ndh/ycfJ | respiratory NADH dehydrogenase 2/cupric reductase/uncharacterized protein | |||||
Only 100 of 147 total aligned reads displayed.
ATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCATCTT > NC_000913/1167333‑1167531 | cttaaggattcggaggagtctgaaaggatgcctgatacaacgcggctgccgatcgcgctgttcctcaagGGCGGATGTGGCATAAACGCCTCATCCGccc > 1:612293‑M1/70‑100 (MQ=255)atgatgCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGGTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGccc > 1:3617849/1‑100 (MQ=255) ttaaggattcggaggagtctgaaaggatgcctgatacaacgcggctgccgatcgcgctgttcctcaagGGCGGATGTGGCATAAACGCCTCATCCGCCCt > 1:1457249‑M1/69‑100 (MQ=255) tgatgCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCt > 2:1919208/1‑100 (MQ=255) tgatgCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCt > 2:3028114/1‑100 (MQ=255) gatgCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCtt < 2:3567778/100‑1 (MQ=255) aaggattcggaggagtctgaaaggatgtctgatacaacgcggctgccgatcgcgctgttcctcaagggcggatgaggcgtttatgccacatccgccCGTg > 1:2319114‑M2/97‑100 (MQ=255) tgCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGa < 2:1202700/100‑1 (MQ=255) tgCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGa < 1:1858066/100‑1 (MQ=255) ggattcggaggagtctgaaaggatgcctgatacaacgcggctgccgatcgcgctgttcctcaagGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAg > 1:2795821‑M1/65‑100 (MQ=255) gCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAg > 1:2790745/1‑100 (MQ=255) gattcggaggagtctgaaaggatgcctgatacaacgcggctgccgatcgcgctgttcctcaagGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAgg > 1:2584744‑M1/64‑100 (MQ=255) cTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAgg < 1:589188/100‑1 (MQ=255) tggtggGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGa < 1:3567249/100‑1 (MQ=255) tggtggGGAGTATTAACCGCGTTATCCGTCCGCGTGTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCAGCCCGTGAgg > 2:1209365/1‑99 (MQ=255) ggtggGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGaa > 2:2781235/1‑100 (MQ=255) ggggAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAg > 2:3141593/1‑100 (MQ=255) ggggAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAg > 1:2738632/1‑100 (MQ=255) ggaggagtctgaaaggatgcctgatacaacgcggctgccgatcgcgctgttcctcaagggcggatgtggcataaacgcctcatccgccCTTGAGGAACAg < 2:3619409‑M2/12‑1 (MQ=255) ggAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTCCACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAgcg > 2:752785/1‑100 (MQ=255) ggAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAgcg > 1:1537000/1‑100 (MQ=255) ggAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAgcg > 1:3635275/1‑100 (MQ=255) aGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATGAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGcgcg < 2:2993950/100‑1 (MQ=255) agtctgaaaggatgcctgatacaacgcggctgccgatcgcgctgttcctcaagGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAgcgcgn > 1:3108966‑M1/54‑99 (MQ=255) tATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGAt > 2:2538092/1‑100 (MQ=255) tATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGAt < 1:2004209/100‑1 (MQ=255) ttAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCg < 2:2688381/100‑1 (MQ=255) tAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCgg > 1:1879632/1‑100 (MQ=255) ccGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAg < 1:1042031/100‑1 (MQ=255) ccGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAg > 2:946433/1‑100 (MQ=255) gcgATATCCGTCGGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGCATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAg < 2:1878845/98‑1 (MQ=255) cgtcctgcgtccgCGGTTGAAGTTTCATTGATCGACGTACACTGGCGGATGTGGCATAAACGCCGCATCCGCCCTTGACGAACAGCGCGATc < 2:2254895/85‑1 (MQ=255) gTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCcgc > 2:1402820/1‑100 (MQ=255) gTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCcgc < 2:1130511/100‑1 (MQ=255) ttATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCcgcg < 1:1941775/100‑1 (MQ=255) tccgtccgCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTg < 1:2846579/100‑1 (MQ=255) tccgCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATc < 1:946440/100‑1 (MQ=255) tccgCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATc > 1:532437/1‑100 (MQ=255) tccgCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATc > 1:3033760/1‑100 (MQ=255) ccgCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGGGGAACAGCGCGATCGGCAGCCGCGTTGTATCa > 2:2191065/1‑100 (MQ=255) cgcgTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAg < 1:467808/100‑1 (MQ=255) gcgTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAgg < 1:2524554/100‑1 (MQ=255) cgTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGc > 2:1397755/1‑100 (MQ=255) cgTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGc < 1:3341033/100‑1 (MQ=255) tttGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCAt > 2:1612546/1‑100 (MQ=255) tttGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCAt < 1:921669/100‑1 (MQ=255) tGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATcc > 2:451471/1‑100 (MQ=255) tGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATcc < 1:1536058/100‑1 (MQ=255) tGAAGTTGCATTAATCGACGTACACT‑GCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCt > 2:841956/1‑100 (MQ=255) tGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAg < 1:721546/100‑1 (MQ=255) tGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAg < 1:722132/100‑1 (MQ=255) gCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGa > 1:973607/1‑100 (MQ=255) cATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGGTGTATCAGGCATCCTTTCAGAc > 2:1561267/1‑100 (MQ=255) ncgcgctgttcctcaagggcggatgaggcgtttatgccacatccgccCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGAct > 1:3108966‑M2/48‑100 (MQ=255) aTTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGAct > 2:101159/1‑100 (MQ=255) aTTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGAct < 2:940483/100‑1 (MQ=255) ttAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGActc > 1:418343/1‑100 (MQ=255) aaTCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGActcct > 1:784433/1‑100 (MQ=255) aaTCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGActcct > 1:660961/1‑100 (MQ=255) aaTCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGActcc > 2:381250/1‑99 (MQ=255) cGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCg < 1:2097293/100‑1 (MQ=255) cGACGTACACTGCCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCg < 2:532435/100‑1 (MQ=255) gACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGa > 1:3043507/1‑100 (MQ=255) cGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAAt > 1:3128116/1‑100 (MQ=255) gTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAAt < 2:3035680/99‑1 (MQ=255) gTACACGGGCGGATGTGGCAGAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATc < 1:3366526/100‑1 (MQ=255) cctcaagggcggatgaggcgtttatgccacatccgccCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATc > 2:266815‑M2/38‑100 (MQ=255) cctcaagggcggatgaggcgtttatgccacatccgccCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATc > 1:2584744‑M2/38‑100 (MQ=255) tACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATcc > 1:1326865/1‑100 (MQ=255) ctcaagggcggatgaggcgtttatgccacatccgccCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATcc > 1:2795821‑M2/37‑100 (MQ=255) cacgGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGACATCCTTTCAGACTCCTCCGAATCCtt > 1:2319114‑M1/5‑100 (MQ=255) cacTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCtt > 2:2031676/1‑100 (MQ=255) cacTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCtt > 2:2425457/1‑100 (MQ=255) acTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTa > 1:2640059/1‑100 (MQ=255) acTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTa > 2:2084902/1‑100 (MQ=255) agggcggatgaggcgtttatgccacatccgccCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTaa > 1:2615211‑M2/33‑100 (MQ=255) gggcggatgaggcgtttatgccacatccgccCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAg > 1:612293‑M2/32‑100 (MQ=255) ggcggatgaggcgtttatgccacatccgccCTTGAGGCACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCCACTCCTTAAGt > 1:853254‑M2/31‑100 (MQ=255) GGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGt < 1:1236422‑M1/100‑1 (MQ=255) GGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGt > 1:3259423‑M1/1‑100 (MQ=255) GGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGt < 2:3343981‑M1/100‑1 (MQ=255) gcggatgaggcgtttatgccacatccgccCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTa > 1:1692974‑M2/30‑100 (MQ=255) cggatgaggcgtttatgccacatccgccCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTAt > 1:598763‑M2/29‑100 (MQ=255) cggatgaggcgtttatgccacatccgccCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTAt > 1:2874129‑M2/29‑100 (MQ=255) GGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTAtt < 2:2779844‑M1/100‑1 (MQ=255) GTGGCATAAACGCCTCATCCGCCGTTGAGGAACAGCGCGATCGGCAGCCGGGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCa > 2:2375226‑M1/1‑100 (MQ=255) tgGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAg > 1:1081920/1‑100 (MQ=255) tgGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAg > 1:1817247/1‑100 (MQ=255) ggcgtttatgccacatccgccCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGc < 2:612291‑M2/79‑1 (MQ=255) ggCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGc < 1:387649/100‑1 (MQ=255) ggCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGc < 2:660958/100‑1 (MQ=255) ccTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCcgcg < 1:127021/100‑1 (MQ=255) ccTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCcgcg > 2:2168495/1‑100 (MQ=255) cTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCgcgc > 2:3169201/1‑100 (MQ=255) cTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCgcgc > 2:1617439/1‑100 (MQ=255) catccgccCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCtt < 1:120848‑M2/92‑1 (MQ=255) ccgccCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTc > 2:1301125‑M2/6‑100 (MQ=255) ggcCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCAt > 1:2451044‑M2/4‑100 (MQ=255) gccCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCAt < 1:3275428‑M2/97‑1 (MQ=255) cTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCAtctt > 1:3550419/1‑100 (MQ=255) | ATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCATCTT > NC_000913/1167333‑1167531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |