BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4235376 =	NA (NA)	10 (0.090)	7/156	NT	NA	coding (1619/1650 nt)	pgi	glucosephosphate isomerase
*	?	NC_000913	4235411 =	NA (NA)	10 (0.090)	7/156	NT	NA	intergenic (+4/‑495)	pgi/yjbE	glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein

Only 100 of 181 total aligned reads displayed.

GTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGA  >  NC_000913/4235313‑4235510

gtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcatc                                                                                                    >  1:1889761‑M1/64‑100 (MQ=255)

gTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcatc                                                                                                    <  1:784432/100‑1 (MQ=255)

   ttCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtc                                                                                                 <  1:3120611/100‑1 (MQ=255)

   gcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtc                                                                                                 >  1:469680‑M1/61‑100 (MQ=255)

    tCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtcg                                                                                                <  1:3506822/100‑1 (MQ=255)

      tGCTAGAGTTGAAAGATGATAAAGAAATCATCAGCCACTATAGCTCGACCAATGGTCTTATTAACCGCTATAAAGCGTTGCGCGGTTAATCAtcgtcg                                                                                                <  2:151973/98‑1 (MQ=255)

       tccAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGata                                                                                             <  2:221767/99‑1 (MQ=255)

       gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGata                                                                                             <  1:1999586/100‑1 (MQ=255)

        ccAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGatat                                                                                            <  2:1567936/100‑1 (MQ=255)

        ccAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGataa                                                                                            >  1:221767/1‑99 (MQ=255)

             gCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAgg                                                                                       <  2:2147419/100‑1 (MQ=255)

             gCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATAGTCGATATGTaag                                                                                       >  2:658827/1‑98 (MQ=255)

               tGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGcc                                                                                     >  2:2809704/1‑100 (MQ=255)

               tGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGcc                                                                                     >  1:2294826/1‑100 (MQ=255)

                gAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCg                                                                                    >  2:2419468/1‑100 (MQ=255)

                gAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCg                                                                                    >  2:2849685/1‑100 (MQ=255)

                 aaaGATGATAAATAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCgg                                                                                   <  1:2652633/100‑1 (MQ=255)

                    gatgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGAt                                                                                 >  1:3081604/1‑99 (MQ=255)

                      tgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAg                                                                              <  1:768553/100‑1 (MQ=255)

                        atAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGc                                                                            >  1:876201/1‑100 (MQ=255)

                        atAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGc                                                                            >  1:410070/1‑100 (MQ=255)

                         tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                                                           >  2:816971/1‑100 (MQ=255)

                         tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                                                           >  1:952781/1‑100 (MQ=255)

                         tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                                                           >  1:659169/1‑100 (MQ=255)

                         tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                                                           >  2:2534156/1‑100 (MQ=255)

                         tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                                                           >  2:430593/1‑100 (MQ=255)

                         tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCACGGTTCATCATCGTGGATATGTAGGCCGGATAAGGCg                                                                           >  2:2454470/1‑100 (MQ=255)

                         tAAAGAAATCAGCAGCCACGATAGCTCGACCAAGGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                                                           <  2:3083355/100‑1 (MQ=255)

                          aaaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                                                           >  1:3265940/1‑99 (MQ=255)

                          aaaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAAACGATATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAgc                                                                             <  2:474351/97‑2 (MQ=255)

                           aaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGtt                                                                         >  1:903454/1‑100 (MQ=255)

                           aaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGtt                                                                         >  2:2357609/1‑100 (MQ=255)

                            aGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTc                                                                        <  1:1143836/100‑1 (MQ=255)

                              aaaTCAACAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCa                                                                       >  2:2984201/1‑99 (MQ=255)

                                 tCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgcc                                                                   <  1:2595219/100‑1 (MQ=255)

                                  cagcagCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTTGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccg                                                                  <  1:3434282/100‑1 (MQ=255)

                                    gcagcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCa                                                                >  1:1460317/1‑100 (MQ=255)

                                      agcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATc                                                              >  1:358405/1‑100 (MQ=255)

                                      agcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATc                                                              >  2:3060324/1‑100 (MQ=255)

                                            gATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaa                                                        >  2:1787986/1‑100 (MQ=255)

                                             aTAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAc                                                       <  1:3045885/100‑1 (MQ=255)

                                              tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGTGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                                                      <  2:3464358/100‑1 (MQ=255)

                                              tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                                                      <  2:377689/100‑1 (MQ=255)

                                               aGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                                                      <  1:2357625/99‑1 (MQ=255)

                                                gCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGa                                                    >  1:1010228/1‑100 (MQ=255)

                                                 cTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGAt                                                   >  1:2064167/1‑100 (MQ=255)

                                                 cTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGAt                                                   >  2:2483730/1‑100 (MQ=255)

                                                  tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATg                                                  <  2:2058654/100‑1 (MQ=255)

                                                  tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATg                                                  <  1:614031/100‑1 (MQ=255)

                                                  tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATg                                                  >  2:738169/1‑100 (MQ=255)

                                                  tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATg                                                  <  1:2556716/100‑1 (MQ=255)

                                                  nagACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAAACATCGTCGACATGTAGGACGGATAAGGCGTTCACGCCGCATTCGGCAACCGATg                                                  >  2:1641778/3‑100 (MQ=37)

                                                   cGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGCCAACCGATGc                                                 >  2:3337540/1‑100 (MQ=255)

                                                    gACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGcc                                                <  2:1306472/100‑1 (MQ=255)

                                                     aCCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCt                                               >  2:849723/1‑100 (MQ=255)

                                                     aCCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCt                                               >  1:1072813/1‑100 (MQ=255)

                                                     aCCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCt                                               <  1:3479284/100‑1 (MQ=255)

                                                      ccAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTg                                              >  2:1801106/1‑100 (MQ=255)

                                                       cAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGa                                             >  2:1384392/1‑100 (MQ=255)

                                                        aaTGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCTACCGATGCCTGAt                                            <  1:2449297/100‑1 (MQ=255)

                                                        aaTGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGAt                                            >  1:1380944/1‑100 (MQ=255)

                                                        aaTGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGAt                                            >  1:2256919/1‑100 (MQ=255)

                                                         aTGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATg                                           >  1:3367587/1‑100 (MQ=255)

                                                            gTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGa                                        >  1:1008871/1‑100 (MQ=255)

                                                            gTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGa                                        >  1:1552751/1‑100 (MQ=255)

                                                             tCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCAGGCATCGGTTGCCGGATGCgg                                        <  1:1001669/99‑2 (MQ=25)

                                                              cTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcg                                      >  1:2681174/1‑100 (MQ=255)

                                                              atgattaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcg                                      >  1:1583918‑M2/37‑100 (MQ=255)

                                                              atgattaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcg                                      >  2:1401137‑M2/37‑100 (MQ=255)

                                                                GATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgcg                                    <  2:1703910‑M1/100‑1 (MQ=255)

                                                                 attaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg                                   >  2:3616159‑M2/34‑100 (MQ=255)

                                                                 attaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg                                   >  1:484521‑M2/34‑100 (MQ=255)

                                                                 ATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg                                   >  2:3605102‑M1/1‑100 (MQ=255)

                                                                   TAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTc                                 <  1:2070262‑M1/100‑1 (MQ=255)

                                                                    AACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcg                                <  2:2987284‑M1/100‑1 (MQ=255)

                                                                     ACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgc                               <  1:728563‑M1/100‑1 (MQ=255)

                                                                     ACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgc                               <  2:2613343‑M1/100‑1 (MQ=255)

                                                                      CCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                              <  1:3567624‑M1/100‑1 (MQ=255)

                                                                      CCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                              >  1:2951823‑M1/1‑100 (MQ=255)

                                                                      CCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                              <  2:2168462‑M1/100‑1 (MQ=255)

                                                                      CCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGCTcgcg                              <  1:2771954‑M1/100‑1 (MQ=255)

                                                                       CGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGt                             <  1:3219566‑M1/100‑1 (MQ=255)

                                                                           ataAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTa                         <  2:1282760/100‑1 (MQ=255)

                                                                             aaaGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATc                       <  1:1827514/100‑1 (MQ=255)

                                                                              aaGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCa                      >  1:3017640/1‑100 (MQ=255)

                                                                                gCGTGGCGCGTTTAATCATCGTCGATCTGCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAgg                    <  2:1541489/100‑1 (MQ=18)

                                                                                   tGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCt                 <  1:1696472/100‑1 (MQ=255)

                                                                                    ggCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcaac                <  1:2466782/100‑4 (MQ=21)

                                                                                    ggCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCACATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcatc                <  1:2806432/100‑4 (MQ=21)

                                                                                     gcgcGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcatcg               <  1:2935837/100‑5 (MQ=21)

                                                                                      cgcgGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACa              >  2:2099381/1‑100 (MQ=255)

                                                                                       gcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAg             >  1:37892‑M2/12‑100 (MQ=255)

                                                                                            taatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGa        >  1:1385311‑M2/7‑100 (MQ=255)

                                                                                              atcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATg      <  1:2155716‑M2/96‑1 (MQ=255)

                                                                                              atcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATg      <  1:339272‑M2/96‑1 (MQ=255)

                                                                                              atcaTCGTCGATATGTAGGACGGATAAGGCGTTCACGACGCATCAGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATg      >  1:346026‑M2/5‑100 (MQ=255)

                                                                                                caTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGcc    <  2:3461420‑M2/98‑1 (MQ=255)

                                                                                                caTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGcc    >  1:1758514‑M2/3‑100 (MQ=255)

                                                                                                 aTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCCTCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCg   <  2:1983680‑M2/99‑1 (MQ=255)

                                                                                                 aTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCg   >  2:1015919‑M2/2‑100 (MQ=255)

GTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGA  >  NC_000913/4235313‑4235510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.