New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4621838150 (1.160)6 (0.050) 5/162 NT 4.2% coding (70/1332 nt) yjjJ putative protein kinase
?NC_000913 = 4621865 138 (1.170)coding (97/1332 nt) yjjJ putative protein kinase
Rejected: Frequency below cutoff threshold.

Only 100 of 170 total aligned reads displayed.

TAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGC  >  NC_000913/4621767‑4621964
                                                                                                     |                                                                                                   
tAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGt                                                                                                    >  2:765429‑M2/1‑99 (MQ=255)
tAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGt                                                                                                    <  1:360577‑M2/100‑2 (MQ=255)
 aaTGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGtt                                                                                                   <  2:2889575‑M2/100‑3 (MQ=255)
     agcgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGttgcca                                                                                               <  1:527401‑M2/100‑7 (MQ=255)
       cgagcTGACGGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGttgccaga                                                                                             >  2:2515750‑M2/1‑92 (MQ=255)
         agcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAgaga                                                                                           >  1:1110939/1‑100 (MQ=255)
         agcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAgaga                                                                                           <  1:2739758/100‑1 (MQ=255)
             gactgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGagaaga                                                                                        >  1:1157932/1‑99 (MQ=255)
             gactgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGAt                                                                                       >  1:1928266/1‑100 (MQ=255)
              actgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATc                                                                                      <  2:1812607/100‑1 (MQ=255)
               ctgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCg                                                                                     <  2:95900/100‑1 (MQ=255)
               ctgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCg                                                                                     >  1:3430312/1‑100 (MQ=255)
               ctgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCg                                                                                     >  1:3025347/1‑100 (MQ=255)
                tgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCgg                                                                                    >  2:3556117/1‑100 (MQ=255)
                 gaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCggg                                                                                   <  1:1032988/100‑1 (MQ=255)
                 gaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCggg                                                                                   >  2:2188494/1‑100 (MQ=255)
                 gaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAACATCgga                                                                                   <  1:313325/100‑2 (MQ=255)
                   tCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTg                                                                                 <  1:2459204/100‑1 (MQ=255)
                    cTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCTGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGa                                                                                >  2:3002787/1‑100 (MQ=255)
                    cTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGa                                                                                <  1:1272136/100‑1 (MQ=255)
                    cTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGa                                                                                >  2:3174037/1‑100 (MQ=255)
                      tttACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGAtt                                                                              >  1:2957505/1‑100 (MQ=255)
                        tACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCg                                                                            <  1:2518554/100‑1 (MQ=255)
                         aCTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGc                                                                           >  1:999858/1‑100 (MQ=255)
                           tgaaaGGGCTGCGTTCTGCCCCAAAATTACGCCAGCGTCTGGCAACCAGGCAGGAGACGTCCTCCCGCCT‑‑‑TGGTTCCAGAGAAGATCGGGGGATTCGCtt                                                                         >  2:1293892/4‑100 (MQ=255)
                            gCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCttt                                                                        >  2:2733150/1‑100 (MQ=255)
                            gCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGGGATTCGCttt                                                                        >  2:651798/1‑100 (MQ=255)
                             cAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTg                                                                       <  2:1110930/100‑1 (MQ=255)
                             cAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTg                                                                       <  1:3318755/100‑1 (MQ=255)
                             cAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTg                                                                       >  2:910353/1‑100 (MQ=255)
                              aaGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTgg                                                                      <  2:104296/100‑1 (MQ=255)
                               aGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGt                                                                     <  2:3174901/100‑1 (MQ=255)
                               aGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGt                                                                     <  1:2335872/100‑1 (MQ=255)
                                gggCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTa                                                                    >  1:192761/1‑100 (MQ=255)
                                gggCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTa                                                                    <  2:530790/100‑1 (MQ=255)
                                gggCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTa                                                                    >  2:2778064/1‑100 (MQ=255)
                                 ggCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTaa                                                                   >  2:60364/1‑100 (MQ=255)
                                  gCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTaaa                                                                  >  2:2010564/1‑100 (MQ=255)
                                  gCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTaaa                                                                  >  1:796272/1‑100 (MQ=255)
                                   ccGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAg                                                                 <  1:1064852/100‑1 (MQ=255)
                                   ccGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAg                                                                 >  1:383010/1‑100 (MQ=255)
                                        ttCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACgg                                                            <  1:910209/100‑1 (MQ=255)
                                         tctcCCACGGCATTGCGCCAGCGTCTGGCACTCAGTCAGGCGAAGTTATCACGCCT‑‑‑GGTTGATAGAGAAGATTGGATTATTCGCTTTGGTAAAGCACtgg                                                           <  2:1402735/100‑1 (MQ=255)
                                         tCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACggg                                                           <  2:1862459/100‑1 (MQ=255)
                                           tGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCa                                                         >  1:3266905/1‑100 (MQ=255)
                                            gCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAATATCGGGTGATTCGCTTTGGTAAAGCACAGGCaa                                                        >  2:3634893/1‑100 (MQ=255)
                                              cccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAAcg                                                      >  2:2400530/1‑100 (MQ=255)
                                              accGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGCAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAAc                                                       >  2:278602/2‑99 (MQ=255)
                                               ccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAAcgc                                                     <  1:685625/100‑1 (MQ=255)
                                                   aaTTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGata                                                 <  2:42052/100‑1 (MQ=255)
                                                   aaTTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGata                                                 <  1:3442435/100‑1 (MQ=255)
                                                      tGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGc                                              <  1:1523980/100‑1 (MQ=255)
                                                      tGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATCCGCTTTGGTAAAGCACGGGCAACGCGATATGc                                              >  2:1140376/1‑100 (MQ=255)
                                                       gcgcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGCTTCGCTTTGGTCAAGCACGGGCAACGCGATATGCa                                             >  1:1404760/1‑100 (MQ=255)
                                                       gcgcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCa                                             >  1:2976330/1‑100 (MQ=255)
                                                       gcgcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCa                                             >  1:2591754/1‑100 (MQ=255)
                                                       gcgcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCa                                             <  2:2195404/100‑1 (MQ=255)
                                                         gcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGGCAGAGAAGATCGGGTGATTCGCGTTGGTAAAGCACGGGCAACGCGATNTGCAct                                           >  1:2873551/1‑100 (MQ=255)
                                                         gcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCAct                                           >  2:399961/1‑100 (MQ=255)
                                                            aGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActgc                                         >  2:2350276/1‑99 (MQ=255)
                                                             gCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActgctg                                       <  1:3556144/100‑1 (MQ=255)
                                                             gCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActgctg                                       <  1:1429278/100‑1 (MQ=255)
                                                              cGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGttgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagct                                      <  1:1475249‑M2/100‑64 (MQ=255)
                                                              cGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTTAAGCACGGGCAACGCGATATGCACagctgc                                      >  1:288579/1‑100 (MQ=255)
                                                              cGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACtgctgc                                      >  2:2442684/1‑100 (MQ=255)
                                                               gTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCg                                     >  1:3431430/1‑100 (MQ=255)
                                                                tCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGt                                    >  2:560096/1‑100 (MQ=255)
                                                                  tGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcn                                  <  2:101758/100‑2 (MQ=255)
                                                                  tGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc                                  <  1:1398585/100‑1 (MQ=255)
                                                                  tGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc                                  <  2:1490135/100‑1 (MQ=255)
                                                                  tGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc                                  <  1:2357643/100‑1 (MQ=255)
                                                                  tGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc                                  <  1:1974759/100‑1 (MQ=255)
                                                                  tGGCAATCAGTCAGGCCACGTTCTCACGCCT‑‑‑TGTTGCCTGAGAAGATCTGGAGATTCGCTTTAGTAAAACAAGGGAAACGCGATATGCActgatacg                                     >  2:2240778/1‑92 (MQ=255)
                                                                   ggCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGttgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagctcgctc                                 <  1:470833‑M2/100‑69 (MQ=255)
                                                                     cAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTa                               >  2:3028715/1‑100 (MQ=255)
                                                                       aTCAGTCAGGCGACGTTCTCACGCCTGACTGattgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagctcgctc                                <  1:1790605‑M2/100‑70 (MQ=255)
                                                                       aTCAGTCAGGCGACGTTCTCACGACT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGAACGGGCAACGCGATATGCACTGCTGCGTCCTTATc                             >  2:1512903/1‑100 (MQ=255)
                                                                         cagtcagGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATcgc                           <  1:630786/100‑1 (MQ=255)
                                                                         cagtcagGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATcgc                           >  1:1788749/1‑100 (MQ=255)
                                                                          agtcagGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCCTATcgcg                          <  1:2706289/100‑1 (MQ=255)
                                                                          agtcagGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTCTGGTAAACCACGGGCAACGCGATATGCACTGCTGCGTCCTTATcgcg                          >  1:1012941/1‑100 (MQ=255)
                                                                           gtcagGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCgg                         >  1:3091403/1‑100 (MQ=255)
                                                                            tcagGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGa                        <  2:2795960/100‑1 (MQ=255)
                                                                             cagGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGaa                       <  2:2332602/100‑1 (MQ=255)
                                                                              agGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAAt                      >  2:55138/1‑100 (MQ=255)
                                                                               ggCGCCGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAAt                      >  2:3407366/1‑99 (MQ=255)
                                                                               ggCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGGAtt                     >  1:1510884/1‑100 (MQ=255)
                                                                               ggCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAAtt                     >  1:3153193/1‑100 (MQ=255)
                                                                                gCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGTGTGATTCGCTTTGGTAAAGCACGGGCAAAACGATATGCACTGCTGCGTACTTATCGCGGAATTg                    >  2:1599762/1‑100 (MQ=255)
                                                                                gCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTg                    <  1:48329/100‑1 (MQ=255)
                                                                                  gACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAg                  <  2:2141201/100‑1 (MQ=255)
                                                                                  gACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAg                  <  2:1887484/100‑1 (MQ=255)
                                                                                       tctcACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTAt             >  2:2356400/1‑100 (MQ=255)
                                                                                         tcACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTc           >  2:2002468/1‑100 (MQ=255)
                                                                                         tcACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTc           >  1:2039125/1‑100 (MQ=255)
                                                                                              ccT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTc      >  1:1610727/1‑100 (MQ=255)
                                                                                              ccT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTc      <  1:770745/100‑1 (MQ=255)
                                                                                                    tgttgCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTgg   <  1:2522500/100‑1 (MQ=255)
                                                                                                    tgttgCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTgg   <  1:1864022/100‑1 (MQ=255)
                                                                                                     gttgCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGc  <  1:399963/100‑1 (MQ=255)
                                                                                                     |                                                                                                   
TAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCT‑‑‑TGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGC  >  NC_000913/4621767‑4621964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.