Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,367,640 C→A 17.6% I190I (ATC→ATA arnC → undecaprenyl phosphate‑L‑Ara4FN transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,367,6400CA17.6% 357.2 / 65.5 144I190I (ATC→ATAarnCundecaprenyl phosphate‑L‑Ara4FN transferase
Reads supporting (aligned to +/- strand):  ref base C (51/66);  new base A (10/15);  total (61/83)
Fisher's exact test for biased strand distribution p-value = 8.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.39e-01

Only 100 of 146 total aligned reads displayed.

ATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGAC  >  NC_000913/2367543‑2367739
                                                                                                 |                                                                                                   
aTTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCtt                                                                                                   <  2:1049143/100‑1 (MQ=255)
 ttACGGTTGTATGCTTCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAAGATATTc                                                                                                  <  1:3591090/100‑1 (MQ=255)
 ttACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCtt                                                                                                   >  2:2965490/1‑99 (MQ=255)
     ggTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAAGATATTcgcca                                                                                              <  1:2437300/100‑2 (MQ=255)
     ggTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAAGATATTcgcca                                                                                              <  1:350291/100‑2 (MQ=255)
      gTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTcgcccg                                                                                             >  1:303238/1‑100 (MQ=255)
      gTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAAGATATTcgccag                                                                                             <  1:2698561/100‑3 (MQ=255)
      gTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAAGATATTcgccag                                                                                             <  1:2701610/100‑3 (MQ=255)
      gTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAAGATATTcgccag                                                                                             <  2:2233543/100‑3 (MQ=255)
      gTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCACCACCTTTATCCCGATTCTGGCGAAGATATTcgccag                                                                                             <  1:2571183/100‑3 (MQ=255)
       ttGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAAGATATTcgccaga                                                                                            <  2:1096699/100‑4 (MQ=255)
       ttGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCAGATTCTGGCGAAGATATTcgccaga                                                                                            <  1:1009787/100‑4 (MQ=255)
         gTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCccgccg                                                                                          >  1:571649/1‑100 (MQ=255)
         gTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAAGATATTcgccagaat                                                                                          <  1:1057111/100‑6 (MQ=255)
          tATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCCCTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCccgccg                                                                                          >  2:1878913/1‑99 (MQ=255)
           aTGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTg                                                                                        <  2:3242157/100‑1 (MQ=255)
           aTGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAAGATATTcgccagaatcg                                                                                        <  1:3489779/100‑8 (MQ=255)
            tgctgcGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAAGATATTcgccagaatcgg                                                                                       <  2:3607591/100‑9 (MQ=255)
             gctgcGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGcc                                                                                      <  2:1592726/100‑1 (MQ=255)
              ctgcGCGCCTATCGCCGTCATATTGTCGATGCGCTGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCa                                                                                     >  2:749431/1‑100 (MQ=255)
               tgcGCGCCTATCGCCGTCATATTGTCGATGCGATGTGGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCAt                                                                                    <  1:2553547/100‑1 (MQ=255)
                   cgcCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGaa                                                                                >  2:12217/1‑100 (MQ=255)
                     ccTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAAt                                                                              >  2:2447541/1‑100 (MQ=255)
                     ccTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAAt                                                                              >  1:882308/1‑100 (MQ=255)
                      cTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAAtt                                                                             >  1:2489978/1‑100 (MQ=255)
                       tATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGACGAATATCTTCGCCCGCCGTGCCATTGAAATTc                                                                            <  2:2404954/100‑1 (MQ=255)
                        aTCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTcc                                                                           <  2:2096330/100‑1 (MQ=255)
                        aTCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTcc                                                                           <  2:1679478/100‑1 (MQ=255)
                         tCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCa                                                                          <  1:365394/100‑1 (MQ=255)
                         tCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCa                                                                          <  1:217038/100‑1 (MQ=255)
                          tcgcatCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAg                                                                         <  2:181492/95‑1 (MQ=255)
                          cGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAg                                                                         <  2:2526830/100‑1 (MQ=255)
                          cGCCGTCATATTGTCGATGCGATGTTGCACTGCCACGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAg                                                                         <  2:2135570/100‑1 (MQ=255)
                           gacctaatatAGTAGATCCGATGTTACACGTCCATGACCGCAGCACCTTTATCCCTATTCTGGCGAAAAACTACGCTCGCCGTGCCATTCAAATTCCAg                                                                         <  2:51128/93‑1 (MQ=255)
                           gCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGt                                                                        >  1:203012/1‑100 (MQ=255)
                           gCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGt                                                                        <  2:3335290/100‑1 (MQ=255)
                           gCCGTCATAGTGTCAATGCGAGGTGGCTATGCCTTGAACGCAGCACCTTTATCCCGATTCTGGCGAATATGTTCGCCCGCCGTGCCATTGAAATTCCAGt                                                                        <  2:304956/100‑1 (MQ=255)
                            ccGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTa                                                                       <  1:1483262/100‑1 (MQ=255)
                             cGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTAc                                                                      <  2:205562/100‑1 (MQ=255)
                              gTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTAca                                                                     <  2:38029/100‑1 (MQ=255)
                              gTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTAca                                                                     <  1:1028162/100‑1 (MQ=255)
                               tCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTAcat                                                                    >  1:2204446/1‑100 (MQ=255)
                                   atTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATg                                                                >  1:2932222/1‑100 (MQ=255)
                                    ttGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGc                                                               >  1:1541549/1‑100 (MQ=255)
                                      ggcgatgcgatgTTGCACTGCCATGAACGGACCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCg                                                             <  2:1532373/98‑1 (MQ=255)
                                      gTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCg                                                             >  1:1436795/1‑100 (MQ=255)
                                      gTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCACGCCGTGCCATTGAAATTCCAGTAAATCATGCCg                                                             >  2:3083297/1‑100 (MQ=255)
                                      gTCGATGCGATGTTGCACTGCCAAGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCAGCCGTACCATTGAAATTCCAGTACATCATGc                                                               >  2:3053914/1‑98 (MQ=255)
                                        cgatgcgatgTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAg                                                           <  2:269091/100‑1 (MQ=255)
                                           tgcgatgTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGt                                                        >  2:62038/1‑100 (MQ=255)
                                             cgatgTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGa                                                      >  1:3279905/1‑100 (MQ=255)
                                             cgatgTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGa                                                      >  2:1275255/1‑100 (MQ=255)
                                             cgatgTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGa                                                      >  1:1009568/1‑100 (MQ=255)
                                             cgatgTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGa                                                      >  1:186612/1‑100 (MQ=255)
                                                 gTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTATATCATGCCGAGCGTGAGttt                                                  <  1:3428354/100‑1 (MQ=255)
                                                 gTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGttt                                                  >  1:6500/1‑100 (MQ=255)
                                                 gTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGttt                                                  >  1:2045604/1‑100 (MQ=255)
                                                   tGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTgg                                                <  1:2154190/100‑1 (MQ=255)
                                                   tGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTgg                                                <  1:795933/100‑1 (MQ=255)
                                                   tGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTgg                                                <  1:2681478/100‑1 (MQ=255)
                                                     cACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGATTTTGGTg                                              <  1:1915309/100‑1 (MQ=255)
                                                     cACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTg                                              <  2:1885918/100‑1 (MQ=255)
                                                      aCTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGa                                             <  2:548096/100‑1 (MQ=255)
                                                      aCTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGa                                             >  1:1380506/1‑100 (MQ=255)
                                                       cTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTg                                              <  2:899130/98‑1 (MQ=255)
                                                       cTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGaa                                            >  2:194389/1‑100 (MQ=255)
                                                       cTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGACGAGCGTGAGTTTGGTGaa                                            <  2:2661585/100‑1 (MQ=255)
                                                        tGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAAt                                           <  1:223980/100‑1 (MQ=255)
                                                         gCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCCTTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAAt                                           >  2:1132275/1‑99 (MQ=255)
                                                         gCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATc                                          >  1:3318733/1‑100 (MQ=255)
                                                           cATGAACGCAGCACCTTAATCCCGATTCTGGCGAATATCTTCGCCCGCCGTTCAATTCAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCa                                        <  2:3097065/100‑1 (MQ=255)
                                                            aTGATCGCAGCACCTTTATCCCGATTCTGGCGAATACCTTCGCCCGACGTGCCATTGAGATTCCAGTACAGCAGGCCGATCGTGAGTTTGGTGAATc                                          <  2:664744/97‑1 (MQ=255)
                                                             tGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCaaa                                      <  1:1179521/100‑1 (MQ=255)
                                                               aaCGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGGGTTTGGTAAATCCAAATa                                    <  2:3214578/100‑1 (MQ=255)
                                                                  gcagcaCCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAg                                 >  1:1897783/1‑100 (MQ=255)
                                                                     gcaCCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGttt                              <  1:3541525/100‑1 (MQ=255)
                                                                     gcaCCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGttt                              <  2:2602426/100‑1 (MQ=255)
                                                                         cTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATg                          <  1:3520654/100‑1 (MQ=255)
                                                                         cTTTATCCCGATAATGGCGAATATCTTCGCCCGTCCTGCAATTGAAATTCCAGTACATCATGCCGAGCGTGACTTTCGTGAATCCAAATACAGTTTTATg                          <  2:1207367/100‑1 (MQ=255)
                                                                             aTCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTCAATCCAAATACAGTTTTATGCGcc                      >  2:914357/1‑100 (MQ=255)
                                                                               cccGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTg                    >  2:2027632/1‑100 (MQ=255)
                                                                                gcacggcgggCGAAGATATTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGa                   >  1:2939567/9‑100 (MQ=255)
                                                                                 cGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGAt                  <  2:2416668/100‑1 (MQ=255)
                                                                                 cGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGAt                  <  1:1643341/100‑1 (MQ=255)
                                                                                   cggcgggCGAAGATATTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTa                >  2:1928177/6‑100 (MQ=255)
                                                                                   cggcgggCGAAGATATTCGCACACCGTGCCATTAAAATTCCAGTACATCATGCCGAGCATGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTa                >  2:3193968/6‑100 (MQ=255)
                                                                                      cgggCGAAGATATTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAAtt             >  1:3148727/3‑100 (MQ=255)
                                                                                      cgggCGAAGATATTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGGGAGATTGGTGAATCCAAATACAGTTCTATGCGCCTGCTTAAt              >  2:488541/3‑99 (MQ=255)
                                                                                      cTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAAtt             <  2:1739286/100‑1 (MQ=255)
                                                                                      cTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCAAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAAtt             >  2:1953701/1‑100 (MQ=255)
                                                                                       tGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACAGCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAAttt            <  2:1856170/100‑1 (MQ=255)
                                                                                        ggCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTg           <  1:1893457/100‑1 (MQ=255)
                                                                                        ggCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTg           >  1:3413171/1‑100 (MQ=255)
                                                                                        ggCGAATATCTTCGCCCGCCGTGCCATTGAAATTCAAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTg           <  1:660489/100‑1 (MQ=255)
                                                                                         gCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGa          >  2:122762/1‑100 (MQ=255)
                                                                                         gCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGa          <  2:291725/100‑1 (MQ=255)
                                                                                           gAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATg        <  2:3588364/100‑1 (MQ=255)
                                                                                           gAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATg        <  2:571647/100‑1 (MQ=255)
                                                                                               atCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACg    <  2:882301/100‑1 (MQ=255)
                                                                                                 cTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGAc  >  2:2285454/1‑100 (MQ=255)
                                                                                                 |                                                                                                   
ATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGAC  >  NC_000913/2367543‑2367739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: