| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,705,970 | G→A | 29.2% | intergenic (‑180/+128) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,705,970 | 0 | G | A | 29.2% | 362.7 / 156.2 | 200 | intergenic (‑180/+128) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base G (66/75); new base A (48/10); total (115/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.24e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.54e-01 | |||||||||||
Only 100 of 211 total aligned reads displayed.
CAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCC > NC_000913/3705871‑3706069 | aTGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGt < 2:2643177/100‑1 (MQ=255) aTGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGt > 1:101470/1‑100 (MQ=255) aTGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAATGCGCTTTGTTTATGCCGGATGCGGCGt > 2:2279716/1‑100 (MQ=255) tGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGtt < 2:684624/100‑1 (MQ=255) gAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTa > 1:1881753/1‑100 (MQ=255) gAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTa > 1:1489292/1‑100 (MQ=255) gTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACg < 1:3487683/100‑1 (MQ=255) tATTGCTGCCGGATGGCGCTGCACGCAGAGTCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTCATGCCGGATGCGGCGTTAACGc < 2:2110316/100‑1 (MQ=255) tATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGc < 1:2323024/100‑1 (MQ=255) tATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGc < 2:290655/100‑1 (MQ=255) gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa < 1:1709789/100‑1 (MQ=255) gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa > 1:2116179/1‑100 (MQ=255) ctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTAt < 2:494654/100‑1 (MQ=255) ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGc < 1:2272090/100‑1 (MQ=255) ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGc > 2:1627169/1‑100 (MQ=255) ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGc < 1:3293593/100‑1 (MQ=37) aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGATTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCt < 2:1992241/100‑1 (MQ=255) tGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑a < 1:213316/100‑1 (MQ=255) ggCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑Ac > 1:161693/1‑100 (MQ=255) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑Ac > 2:3460089/1‑99 (MQ=255) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑a < 2:1529982/100‑1 (MQ=255) cgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGcataaac < 2:3415184/100‑7 (MQ=25) gCACGCAGAGGAACAGCGCCACCGGGTATACAGATAGTGGACAAAGTGCGCTTTGTTTATGCCGAATAAGGCGTTAACGCCGCATCCGGcataaacaaa < 2:1717787/99‑10 (MQ=18) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCg < 1:3044625/100‑1 (MQ=255) aCGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGt > 1:342496/1‑100 (MQ=255) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTg < 1:1370036/100‑1 (MQ=255) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTg > 1:3021453/1‑100 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGc < 1:1974731/100‑1 (MQ=255) cAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCa < 1:206555/100‑1 (MQ=255) cAGACGCACAGCGCCACCGGCTATACAGATTGTTGACAAATTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGc < 2:1077484/99‑1 (MQ=255) agGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAAt < 1:628829/100‑1 (MQ=255) ggCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAAtt > 2:101148/1‑100 (MQ=255) gCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCAGCCT‑‑AC‑AAAATCGTGCAAATTc > 2:380018/1‑100 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCa > 1:3080347/1‑100 (MQ=255) acaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCaa > 1:1794866/1‑100 (MQ=255) caGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAAt < 2:310388/100‑1 (MQ=255) caGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAAt < 2:671520/100‑1 (MQ=255) aGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCTGCCT‑‑AC‑AAAATCGTGCAAATTCAATa < 1:2219017/100‑1 (MQ=255) aGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATa > 1:740880/1‑100 (MQ=255) gcgcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATAc > 1:2019660/1‑100 (MQ=255) cgcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACa > 2:3128333/1‑100 (MQ=255) gcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACAt > 1:134892/1‑100 (MQ=255) ccACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACAtt > 1:950880/1‑100 (MQ=255) ccACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACAtt < 1:2493535/100‑1 (MQ=255) cACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTg < 1:3361132/100‑1 (MQ=255) ccGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGc < 2:269972/99‑1 (MQ=255) aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTc < 1:317356/100‑1 (MQ=255) cAGATTGTTGACAAANTGCGNTTTGTTNATGCCGGNTGCGGCGTTAACGNCTTNTCCGGCCT‑‑AC‑AAAATCGTGCAAATNCAANACATTGCA‑GAAT‑TTTc > 2:2221156/1‑99 (MQ=17) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑g < 1:1469346/100‑1 (MQ=255) gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTa > 2:3064913/1‑100 (MQ=255) gcataaaCAAAGCGCACTTCGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAgg > 2:1160602/7‑100 (MQ=18) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGcc < 1:2983164/100‑1 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGcc < 2:740877/100‑1 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATa > 1:93419/1‑100 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGAA‑GAAT‑TTTC‑‑GTGGGACTGATatg > 2:3579623/1‑97 (MQ=17) gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCg > 1:115850/1‑100 (MQ=255) gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCg < 2:1865346/100‑1 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCgg < 1:2445447/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAGTCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAg < 2:1587848/99‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgc < 2:617577/100‑1 (MQ=255) tccgatctaggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑‑AC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCCCTT‑‑GTAGGCCTGATAAGCGTAgcgc < 1:1140327/90‑1 (MQ=18) gaatttgtaggCCGGATAAGGCGTTTACGCCGCATCTGGCCT‑‑AC‑AAATTCTTCCAAATTCAGTATATTGCA‑GAAA‑TCAT‑‑GTAGGCCTGATAAGCGTAgcg > 1:1752813/11‑100 (MQ=12) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg > 1:446404/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg > 2:113461/1‑100 (MQ=255) agttttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCATAAAC‑AAAACTGTGCAAATTCAATATATTGCA‑GGAA‑ACAC‑‑GTAGGCCTGATAAGCGAAg > 2:754061/11‑100 (MQ=2) tttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcgc > 2:328768/1‑100 (MQ=255) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑‑ACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑CAT‑‑‑GTAGGCCTGATAAGTGTAGCGCAt > 1:1271158/8‑100 (MQ=18) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCa > 1:1692890/1‑100 (MQ=255) tgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCAT‑‑AC‑AAGTTCGTGCAAATTCAATAAATTGCA‑ATA‑‑TGAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:1696765/6‑100 (MQ=18) gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑‑AC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 1:2192925/5‑100 (MQ=18) gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑‑AC‑AAAACAGTGCAAATTCAATATATTGCA‑ATCT‑TCTG‑‑GTAGGCCTGATAAGCATCGCGCATCAg > 2:2763245/5‑100 (MQ=18) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑‑ACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 1:2535929/5‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑‑AC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAgg > 1:2786673/4‑100 (MQ=21) aggCCGGATAAGGCGTTTACGCCGCATCTGGCCT‑‑AC‑AAATTCTTCCAAATTCAATATATTGCA‑GAAA‑TCAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:1822416/3‑100 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAACATATTGCA‑‑ATTCTCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:861865/3‑100 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑‑AC‑AAAAGCATGCAAATTCAATATATTGCA‑GAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:1847401/3‑100 (MQ=17) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑‑AC‑AAAACAGTGCAAATTCAATATATTGCA‑ATCT‑TCTG‑‑GTAGGCCTGATAAGCATCGCGCATCAGGc > 1:1833242/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACTCCGCATCCGGCCT‑‑AC‑AAAAGCACGCAAATTCAATATATTGCA‑GAGA‑TTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:3564957/3‑100 (MQ=11) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑‑AC‑AAAACCTTGCTAATTCAATATATTGCAGGGAC‑TAT‑‑‑GTAGGCCTGATAAGCATAGCGCATCAGGc > 1:549715/3‑100 (MQ=18) aTGCCGGATGCGGCGTGAACGCCTTATCCGGCCT‑‑AC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑ATTG‑‑GTAGGCCTGATGCGCTGCGCTTATCAGGc < 2:653849/100‑1 (MQ=21) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa > 1:3553624/1‑100 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCGT‑‑AC‑AAAAGCATGCAAATTCAATATATTGCA‑GAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2451247/2‑100 (MQ=17) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑‑AC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAt > 1:2154372/2‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑‑AC‑AAAAGCATGCAAATTCAATATATTGCA‑GAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2813960/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑‑AC‑AAAATCATGAAAATTCAATACATTGCA‑AGAT‑TTTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:145228/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑‑AC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑AAT‑CTCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:2463804/2‑99 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑‑AC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑AAT‑CTCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:13546/2‑100 (MQ=18) gCCGGATCAGGCGTTAACGCCGCATCCGGCCT‑‑AC‑AAAGTCGAGCAAATTCACTACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGATCGCATCAGGCa > 2:2439315/1‑99 (MQ=17) gCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑‑AC‑AAAAGCATGCAAATTCAATATATTGCA‑GAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:1986198/1‑99 (MQ=17) gCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑‑AC‑GAAATCGTGCTAATTCAATATATTGTG‑GGCT‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgaga > 1:287876/1‑96 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑‑AC‑AAGTTCGTGCAAATTCAATAAATTGCA‑‑ATA‑TGAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGcgat > 2:582636/1‑97 (MQ=21) gCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑‑AC‑AAAATCATGAAAATTCAATACATTGCA‑AGAT‑TTTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCac > 1:269161/1‑99 (MQ=17) gCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑‑AC‑AAAACTTTGCAAATTCAATATATTGCA‑ATCT‑CCGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 2:2319068/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑‑AC‑‑AAATCATGCAAATCCAAAATATTGCA‑GGAG‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 1:1666181/1‑100 (MQ=21) ccGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtt > 1:1554762/1‑100 (MQ=255) ccGGATAAGGCGTTCACGCCGCATCCGGCCT‑‑AC‑AAAAGCATGAAAATTCAATATATTGCA‑GGAG‑CTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGACagt > 1:3240046/1‑98 (MQ=17) cGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAttt > 1:2927220/1‑100 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:1065965/100‑1 (MQ=255) gcggcgTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAttttt > 2:3405976/1‑97 (MQ=255) gcggcgTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 2:1505022/100‑1 (MQ=255) | CAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑‑AC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCC > NC_000913/3705871‑3706069 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |