| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,946,689 | G→A | 33.8% | intergenic (+82/‑11) | rrlC → / → rrfC | 23S ribosomal RNA of rrnC operon/5S ribosomal RNA of rrnC operon |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,946,689 | 0 | G | A | 33.8% | 258.9 / 239.4 | 260 | intergenic (+82/‑11) | rrlC/rrfC | 23S ribosomal RNA of rrnC operon/5S ribosomal RNA of rrnC operon |
| Reads supporting (aligned to +/- strand): ref base G (102/70); new base A (82/6); total (184/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.53e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.74e-02 | |||||||||||
Only 100 of 279 total aligned reads displayed.
ACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCT > NC_000913/3946590‑3946788 | aCCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCtgatg < 2:902534/100‑1 (MQ=35) ccGTGAGGCTTAACCTTACAACGCCTAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCtgatg < 1:3076981/99‑1 (MQ=18) ccGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCtgatga > 1:3281716/1‑100 (MQ=35) cGTGAGGCTTAACCTTACAACGCGGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCtgatga < 2:3446904/99‑1 (MQ=25) cGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGaa > 2:1663812/1‑100 (MQ=38) cGTGAGGCTTAACCTTACAACGCCGAAGATGTTCTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGaa > 2:2372777/1‑100 (MQ=38) gTGAGGCTTCACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATGAAATCAGAACGCAGAAGCGGTCTGATGaaa > 2:1576280/1‑100 (MQ=255) tGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAAc < 1:393708/100‑1 (MQ=38) tGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAAc < 2:2836302/100‑1 (MQ=35) gtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAAc > 1:1396239‑M1/72‑100 (MQ=255) gtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAAc > 2:2605364‑M1/72‑100 (MQ=255) tttcacttctgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAAc > 2:1387407‑M1/71‑99 (MQ=255) tttcacttctgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACa > 1:2486449‑M1/71‑100 (MQ=255) tttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACa > 1:1351857‑M1/71‑100 (MQ=255) tttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACa > 1:1967175‑M1/71‑100 (MQ=255) tttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACa > 2:3388249‑M1/71‑100 (MQ=255) ttcacttctgagttcggcagggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACAg > 1:66870‑M1/70‑100 (MQ=255) aGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAg > 2:3016143/1‑100 (MQ=35) tcacttctgagtggggcagggggtcaggtgggaccaccgcgctacgggcgccaggcaaattctgtttcATCAGAACGCAGAAGCGGTCTGATGAAACa > 2:3077834‑M1/69‑98 (MQ=255) cacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAACAGaa > 2:1554219‑M1/68‑100 (MQ=255) acttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtttcATCAGAACGCAGAAGCGGTCTGATGAAACAGAAt > 2:1997369‑M1/67‑100 (MQ=255) aaCCTTACGACGCCGAAGATGTTTTGCCCGATGAGAGAAGCTTTTCAGCCTGATACAGCTTAACTCACCACCCAGAAGCGGGCTGCTGGAACAGAATTTg > 2:139110/1‑100 (MQ=11) aaCCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTg < 1:2544401/100‑1 (MQ=38) tgagttcggcatggggtcaggtgggaccaccgcgctactgccgccaggcaaattctgttttATCAGAACGCAGAAGCGGTCTGATAAAAcagaatagatc < 2:974691‑M1/39‑6 (MQ=255) ttACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTg < 1:2767347/100‑1 (MQ=38) ncAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTggc > 2:2518856/2‑100 (MQ=38) cAACGCCGAAGTTGTTTTGTTGGATGAGAGAATATTTTCAGCGTGATACAGATTAAATCACAACGGAGAAGAGGTCTGATGAAACATAATTTGcgt > 2:1202742/1‑94 (MQ=11) aaCGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACTCAGAAGCGGTCTGATGAAACAGAATTTGCCTggcgg < 1:2565150/100‑1 (MQ=255) ccGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGt > 2:2801149/1‑100 (MQ=38) gAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAg < 2:1914783/100‑1 (MQ=38) aaGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGCCTGATGAAACAGAATTTGCCTGGCGGCCGTCgc > 2:1568470/1‑100 (MQ=255) aTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGcgcg < 2:18937/100‑1 (MQ=35) aTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGcgcg > 1:1024429/1‑100 (MQ=35) aTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGcgcg > 2:1638221/1‑100 (MQ=35) tGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTAGCGGCCGTAGCGCgg < 1:521869/100‑1 (MQ=18) ggCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTcc > 1:802344/1‑100 (MQ=33) nggATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCa > 1:2054033/2‑100 (MQ=18) cGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCa < 1:1747166/100‑1 (MQ=33) ggATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc > 1:2310240/1‑100 (MQ=33) naagaTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAcccc > 1:3240328/2‑100 (MQ=18) aagaTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCa < 1:1134419/100‑1 (MQ=33) ttttCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGcc < 1:3510556/100‑1 (MQ=33) ttttCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGcc < 1:319942/100‑1 (MQ=32) ttttCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGc < 1:3356559/99‑1 (MQ=32) ttCAGCCTGATACAGATTAAATCAGAACGCAGCAGCGGTCTGATGAAACAGAATTTGCTTGACGGCCGTAGCGCGGTGCTCCCACCGGCCCCCATgacta > 1:3038110/1‑96 (MQ=11) ttCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGa > 2:2695288/1‑100 (MQ=33) gCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTc > 2:603406/1‑100 (MQ=33) ccTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCa < 1:612227/100‑1 (MQ=33) tccgatcttgttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAg < 1:804995‑M2/62‑1 (MQ=255) cTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAg < 2:1837368/100‑1 (MQ=33) gATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGaa > 1:2816990/1‑100 (MQ=33) aTACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAg < 2:2997575/100‑1 (MQ=33) tACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGt > 1:1592047/1‑100 (MQ=32) tctgttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGa > 1:2606904‑M2/33‑100 (MQ=255) cAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGa < 1:2631785/100‑1 (MQ=33) cAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGa < 1:1817397/100‑1 (MQ=33) ctgttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa > 1:1493263‑M2/32‑100 (MQ=255) ctgttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa > 1:1475763‑M2/32‑100 (MQ=255) ctgttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa > 1:693096‑M2/32‑100 (MQ=255) ctgttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa > 1:548976‑M2/32‑100 (MQ=255) ctgttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa < 2:1493255‑M2/69‑1 (MQ=255) ctgttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa > 1:1286954‑M2/32‑100 (MQ=255) ctgttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa > 1:3412086‑M2/32‑100 (MQ=255) ctgttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa > 2:1754273‑M2/32‑100 (MQ=255) aGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa < 1:2332972/100‑1 (MQ=33) aGATTAAATCAGAACGCAGAAGAGAGCTGATGAAACACAAGTCGCCTGGCGGCCGGAGCGGGGAGGTCCCACCTGCCCCCATGCCGAATTCAGAAGTg < 2:2427920/98‑1 (MQ=11) tgttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaaa > 2:3389232‑M2/31‑100 (MQ=255) cttccgATCTGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaaa > 1:1365908‑M1/7‑100 (MQ=255) nttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAc > 1:1408253‑M2/30‑100 (MQ=255) gttttattagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAc > 1:1918414‑M2/30‑100 (MQ=255) gttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAc > 1:2964835‑M2/30‑100 (MQ=255) gttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAc > 1:2735726‑M2/30‑100 (MQ=255) gttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAc > 1:1178110‑M2/30‑100 (MQ=255) gttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAc > 2:1930940‑M2/30‑100 (MQ=255) gttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAc > 1:2172575‑M2/30‑100 (MQ=255) gttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAc > 1:341285‑M2/30‑100 (MQ=255) gttttatcagaccgcttctgcgttctgatAAAAAAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACATGACCCCATGCCGAACTCAGAAGTGAAAc > 2:2188718‑M2/30‑100 (MQ=255) gtttcATCAGATCGCTTCTGCGTTCTGATGAAACAGAATTTGCCTGCCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa < 2:1902684‑M1/93‑1 (MQ=255) aTTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAc > 1:989542/1‑100 (MQ=33) ttttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACg > 1:2140425‑M2/29‑100 (MQ=255) tttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGc > 2:3055590‑M2/28‑100 (MQ=255) tttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGc > 1:2375129‑M2/28‑100 (MQ=255) ttatcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGcc > 1:846529‑M2/27‑100 (MQ=255) tcatcagaccgcttctgcgttctgatGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGcc > 1:964029‑M2/27‑100 (MQ=255) aaaTCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGcc > 2:2157545/1‑100 (MQ=32) aaTCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCg < 2:2726230/100‑1 (MQ=32) atcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGt > 2:1342789‑M2/25‑100 (MQ=255) tcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTa > 2:2658651‑M2/24‑100 (MQ=255) tcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTa > 2:1244153‑M2/24‑100 (MQ=255) tcagaccgcttctgcgttctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTa > 2:3498107‑M2/24‑100 (MQ=255) AGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAgc < 2:1284862‑M1/100‑1 (MQ=255) AGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAgc > 1:1108640‑M1/1‑100 (MQ=255) cAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGAt > 2:3227331/1‑100 (MQ=32) gAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATgg < 2:3314780/100‑1 (MQ=33) gAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATgg > 2:473914/1‑100 (MQ=33) aGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTa < 2:2024627/100‑1 (MQ=32) ggTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAgtg > 1:289786/1‑100 (MQ=33) gatGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTgggg > 2:1807333‑M2/4‑100 (MQ=255) gatGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTgggg < 2:1116330‑M2/97‑1 (MQ=255) tGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTc > 2:426771‑M2/2‑100 (MQ=255) | ACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCT > NC_000913/3946590‑3946788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |