| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,049,986 | G→T | 15.8% | intergenic (+234/+147) | polA → / ← yihA | 5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease/cell division GTP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,049,986 | 0 | G | T | 15.8% | 365.7 / 52.0 | 138 | intergenic (+234/+147) | polA/yihA | 5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease/cell division GTP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (65/50); new base T (15/7); total (81/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.62e-01 | |||||||||||
Only 100 of 149 total aligned reads displayed.
AAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATCTATTGAATT > NC_000913/4049887‑4050085 | aaaGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCcagtcag > 1:815101/1‑100 (MQ=255) gTTAGTCGCGTATGGTACAGAGGTAAGATGTTCTATCTTTCAGATCTTTTACTTCACGTAATCGGAATCTGCTGAATATTTTAGCCCCCCCATTCAGTaa > 2:608715/1‑100 (MQ=255) ttAGTCTCGTAGGGTTCATAGGTAAGATATTCTATTTTTCAGCCCTGTTACTTCACGTAATCGGATTTGGCTGAATATTTTATCCGCCCcagtcagt < 2:3534227/97‑1 (MQ=255) gTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGAc > 1:241954/1‑100 (MQ=255) gTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATCTTAGCCGCCCCAGTCAGTAATGAc > 1:437137/1‑100 (MQ=255) cgTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCATTACTGACTggg < 1:2408187/100‑1 (MQ=255) gTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCATTACTGACTgggg < 1:135610/100‑1 (MQ=255) gTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCATTACTGACTgggg < 1:478826/100‑1 (MQ=255) gTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTgggg < 2:1087448/100‑1 (MQ=255) gggTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGt > 1:959463/1‑100 (MQ=255) gggTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGt > 2:3104/1‑100 (MQ=255) cAGAGGTAAGATGTTCTATTTTCCAGACCTTTTGCTTTACGTAATCGGATTTGGCTGAAGATTTTATCCGCCCCACTCGGTAATGACTGGGGCGcttttt < 2:2046969/100‑1 (MQ=255) cAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGtttttt > 2:5363/1‑100 (MQ=255) cAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGtttttt < 2:1601840/100‑1 (MQ=255) cAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGtttttt > 2:3286223/1‑100 (MQ=255) agagGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTa < 1:3272313/100‑1 (MQ=255) gagGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTAt > 1:2322087/1‑100 (MQ=255) gagGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTAt > 2:1055746/1‑100 (MQ=255) gagGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTAt > 1:1169720/1‑100 (MQ=255) gagGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTCGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACGGGAGCGtttttca > 1:1878065/1‑97 (MQ=255) gttagattGTCCTATCTTTCGAACTTTTTCGTTCCCGTAAT‑GGGCTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTg < 1:1691560/92‑1 (MQ=255) ggTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTg < 2:694530/100‑1 (MQ=255) ggTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTg < 2:2056025/100‑1 (MQ=255) gTAAGATGTTCTTTCTTTTAGACCTTTTACTTCACGGACTCGGATTTGGCTGAATATTTTAGCCGCCCCCGTCAGTTATGACTGTGGCGTTTTTTATTg < 2:1959226/99‑1 (MQ=255) gTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATCTTCGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTgg > 2:2554324/1‑100 (MQ=255) aataTGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGc < 1:2145234/97‑1 (MQ=255) aGATGTAATTTCTTCCAGACCTTTTACTTCAGGTAATTTGATTTCTCTGAATATTTTAGCCGTTCAATTCAATAATGTCTAGGGCGTTTTTTAt > 2:3221942/1‑94 (MQ=255) gATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCga > 2:1415013/1‑100 (MQ=255) gATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCga > 1:1892067/1‑100 (MQ=255) gTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCgaaag > 1:780920/1‑100 (MQ=255) ttCTATCTTTTAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCgaaaga < 2:2385967/100‑1 (MQ=255) tCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCgaaagaa > 1:2793624/1‑100 (MQ=255) tCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCgaaagaa > 1:3021918/1‑100 (MQ=255) aTCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGaaagaaaag < 1:2179900/100‑1 (MQ=255) aTCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGaaagaaaag < 1:1253042/100‑1 (MQ=255) cTTTCAGCCCTATTACTTCACGTCATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATAACTCGGGCGTTTTTTATTGAGCGAAAGAAAAGAt > 2:1914376/1‑100 (MQ=255) cTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGAt < 2:470272/100‑1 (MQ=255) tttCAGTCCTTTTACTTCACGTAATCGGATTTGTCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCTTTTTTTATTGGGCGAAAGAAAAGATc < 2:2579459/100‑1 (MQ=255) tttCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGAt > 2:362215/1‑99 (MQ=255) tttCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATc > 1:231740/1‑100 (MQ=255) tttCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATc < 1:1339017/100‑1 (MQ=255) tttCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATc < 1:456314/100‑1 (MQ=255) ttCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATcc > 1:1533471/1‑100 (MQ=255) tCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCg < 2:1679990/100‑1 (MQ=255) cAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGt < 1:1953768/100‑1 (MQ=255) aGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTCTTCGGCGAAAGAAAAGATCAGt > 2:3351040/1‑99 (MQ=255) cTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGTCGAAAGAAAAGATCCGTAATGc > 2:3200133/1‑100 (MQ=255) ttttACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGcc < 1:2906758/100‑1 (MQ=255) aCTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGAt > 2:1268369/1‑100 (MQ=255) cTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATg > 2:1293757/1‑100 (MQ=255) tCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATACGTAATGCCTGATgcg > 2:886836/1‑100 (MQ=255) tCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGGAATGACTGGGGCGTTTTTTATTGGGCGAAAGAATAGATCCTTAATGCCTGATgcg < 2:1353815/100‑1 (MQ=255) aCGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCt < 2:2302910/100‑1 (MQ=255) gTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTAt > 1:3342238/1‑100 (MQ=255) tAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATg < 2:1531297/100‑1 (MQ=255) aTCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGtt > 1:1744969/1‑100 (MQ=255) cGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTa > 2:1955169/1‑100 (MQ=255) cGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTa < 2:475784/100‑1 (MQ=255) gATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATc < 2:3354060/100‑1 (MQ=255) aTTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCa < 1:270318/100‑1 (MQ=255) tttGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAg < 1:3614957/100‑1 (MQ=255) tttGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTGTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAg > 1:1075502/1‑100 (MQ=255) ttGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAgg < 1:3124544/100‑1 (MQ=255) ttGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAgg < 2:3011245/100‑1 (MQ=255) ttGGATGAATATTTTAGATGAACCAGTCAGTAATGACTGAGGTGTTTGTTATTGGGCGCAAGAAAAGATCGGTAATGCCCGATGAGCTATGTTTATCAgg < 2:2171949/100‑1 (MQ=255) tGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGc < 2:818203/100‑1 (MQ=255) ggCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGcc > 1:1623136/1‑100 (MQ=255) cTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGATTATCAGGCCaa > 2:1428321/1‑100 (MQ=255) tGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCaa > 2:2785203/1‑99 (MQ=255) tGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAAc < 2:1884729/100‑1 (MQ=255) atatTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGt < 1:1115249/100‑1 (MQ=255) tatTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTa > 1:1732207/1‑100 (MQ=255) atTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAg < 2:1323970/100‑1 (MQ=255) ttttAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGa > 2:1516033/1‑100 (MQ=255) tttAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGaa < 2:71602/100‑1 (MQ=255) ttAGCCCCCACAGTCAGTAATGACTGGGGCAATTTTTACCGCCAGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGTCAACGGTAGaa < 2:3087906/99‑1 (MQ=255) aaaaacgccCCAGTCATTACTGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAAt > 1:1318812/6‑100 (MQ=38) aaaacgccCCAGTCATTACTGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAAtt > 1:39104/5‑100 (MQ=38) gccgccCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGt < 2:2734754/100‑1 (MQ=255) ccgccCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTa > 1:647285/1‑100 (MQ=255) acgccCCAGTCATTACTGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTa > 1:2498686/2‑100 (MQ=255) gccCCAGTCATTACTGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCC‑GATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATc > 1:2047488/1‑100 (MQ=255) gccCCAGTCAGTAATGACTGGGGCGTTTTTTATTTTTTTTTATTAAAGATCCGTAATGCCTGATGCTCTATTTTTATCAGGCTCACGGTAGAATTGTTAt > 2:3103000/1‑100 (MQ=255) gccCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAAt > 2:1056582/1‑100 (MQ=255) ccccAGTCATTACTGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATc > 2:2746008/1‑100 (MQ=255) ccccAGTCATTACTGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATc > 2:22227/1‑100 (MQ=255) ccccAGTCATTACTGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATc > 1:2981023/1‑100 (MQ=255) ccccAGTCATTACTGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATc > 1:169044/1‑100 (MQ=255) ccccAGTCATTACTGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTACAATTGTAATc > 1:2672519/1‑100 (MQ=255) ccccAGTCATTACTGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCAGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATc > 1:26018/1‑100 (MQ=255) ccAGTCATTACTGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATCTa > 1:3510048/1‑100 (MQ=255) ccAGTCATTACTGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATCTa > 1:3146945/1‑100 (MQ=255) ccAGTCATAACTGCCTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATCTa > 2:2923789/1‑100 (MQ=255) cagtcagtAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATCTAt < 1:1405365/100‑1 (MQ=255) cagtcagtAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATCTAt > 2:2690291/1‑100 (MQ=255) cagtcagtAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATCTAt < 1:1041762/100‑1 (MQ=255) agtcagtAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATCTAtt < 2:2611849/100‑1 (MQ=255) cagtAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATCTATTGaa > 2:3305153/1‑100 (MQ=255) agtAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATCTATTGAAt > 1:320792/1‑100 (MQ=255) gtAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATCTATTGAAtt < 1:2800655/100‑1 (MQ=255) | AAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGTAGAATTGTAATCTATTGAATT > NC_000913/4049887‑4050085 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |