| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,177,172 | T→A | 22.7% | intergenic (+44/‑186) | tufB → / → secE | translation elongation factor EF‑Tu 2/preprotein translocase membrane subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,177,172 | 0 | T | A | 22.7% | 302.3 / 82.6 | 149 | intergenic (+44/‑186) | tufB/secE | translation elongation factor EF‑Tu 2/preprotein translocase membrane subunit |
| Reads supporting (aligned to +/- strand): ref base T (46/69); new base A (15/19); total (61/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 155 total aligned reads displayed.
TCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATA > NC_000913/4177073‑4177269 | tCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAtt < 1:3164438/100‑1 (MQ=255)tCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAtt < 2:1346739/100‑1 (MQ=255) ccGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAttt < 2:3139763/100‑1 (MQ=255) gTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGa < 1:109319/100‑1 (MQ=255) gTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGa < 2:1599027/100‑1 (MQ=255) tGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGAt < 2:2567350/100‑1 (MQ=255) gAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATg < 1:1754432/100‑1 (MQ=255) aaGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGc < 1:3405286/100‑1 (MQ=255) ggcggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGccc > 2:3373336/1‑100 (MQ=255) cggacggagcGTTGGGGCGTGCGTTGTAGCAAAAGTTCTTGGCTAATTGCCTATAACATCTGACGGAATGCGCACTTAGAGTGCATCAAATGATGCCCtt < 2:1300967/91‑1 (MQ=255) gcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtttt < 1:2410465/100‑1 (MQ=255) gcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTGCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtttt < 2:683011/100‑1 (MQ=255) gcCGTACCGTTGGCGCGGGCGTTCTAGCAAAAGTTCTTAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtttt < 1:3261279/100‑1 (MQ=38) ccGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCttttt > 1:1985124/1‑100 (MQ=255) cGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttag < 1:1457235/100‑3 (MQ=255) cGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttag < 1:1457168/100‑3 (MQ=255) cGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttag < 2:1370015/100‑3 (MQ=255) cGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttag < 2:249899/100‑3 (MQ=255) gTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGc < 1:1364284/100‑1 (MQ=255) gTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGc > 2:274421/1‑100 (MQ=255) gTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGc < 1:1494971/100‑1 (MQ=255) gTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttagt < 2:3267890/100‑4 (MQ=38) tACCTTTGGCGCGGGCGTTGTAGCAAAAGTTCTGCGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttag < 2:2257761/98‑3 (MQ=38) tACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCAATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttagtg < 2:50277/100‑5 (MQ=38) aCCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCAc < 1:3566904/100‑1 (MQ=255) cGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGc > 1:1140710/1‑100 (MQ=255) gTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑t < 1:217295/100‑1 (MQ=255) tGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑ttt < 2:2028918/100‑1 (MQ=255) gcgcGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCg > 1:2633563/1‑100 (MQ=255) gcgcGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCg < 2:3507256/100‑1 (MQ=255) cgcgGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGt < 1:3162330/100‑1 (MQ=255) gctgacGTTGTAGCAAAAGTTCTAAGCCAATTGCCCATAACAGTTGACGCAATGCGCACTCAAAGGCCATCATTTGATGCCCTATTTGCACGC‑TTTc < 2:1736462/92‑1 (MQ=255) gcgGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTa < 1:3444674/100‑1 (MQ=255) gcgGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTa < 2:1704240/100‑1 (MQ=255) gccggCGTTGTAGCAAAAGTTCTGCGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTa < 2:149311/97‑1 (MQ=255) tggCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTAcc < 2:3535187/99‑1 (MQ=255) gggCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTAcc < 2:718024/100‑1 (MQ=255) gggCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTAcc < 1:235754/100‑1 (MQ=255) gCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAg < 1:3410107/100‑1 (MQ=255) ttGTAGCAAAAGTTCTGGGCTAATTGCCGATAACATTGGACGCAATGCGCACTAAAAGGGCATCATTTCATGCCCTTTTTGCACGC‑TTTCGTAcc < 2:988060/95‑1 (MQ=255) ttGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAAc < 2:628467/100‑1 (MQ=255) gTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCt > 2:2795084/1‑100 (MQ=255) tAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTg > 2:3316928/1‑100 (MQ=255) gCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGc < 2:3237887/100‑1 (MQ=255) gCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGc < 1:274423/100‑1 (MQ=255) cAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGc > 1:2271553/1‑99 (MQ=255) aaaGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCtca > 2:3557966/1‑100 (MQ=255) aaGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCtcat < 2:1147024/100‑1 (MQ=255) aGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGATCCTTGCtcatc < 2:1906441/100‑1 (MQ=255) aGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCtcatc < 1:1293172/100‑1 (MQ=255) aGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCtcatc < 2:135469/100‑1 (MQ=255) ttCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTATTAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCtcatcc < 2:2880085/99‑2 (MQ=255) ttCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAg < 2:2088113/100‑1 (MQ=255) gCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGAttt < 2:469010/100‑1 (MQ=255) gCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGAttt < 1:1403138/100‑1 (MQ=255) tAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTc > 1:1054732/1‑100 (MQ=255) tAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCACCAGTGATTTTc > 1:2190928/1‑100 (MQ=255) aTTGCCGATAACATTTGACGCAATTCGCACTAAAAGGGCATCATTTCATGCCCTTTTTTCACTC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCtt < 2:3029749/100‑1 (MQ=255) gCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGt > 1:1469666/1‑100 (MQ=255) gCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGt > 1:3233239/1‑100 (MQ=255) gCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGt > 1:870281/1‑100 (MQ=255) gCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGt > 2:125639/1‑100 (MQ=255) ccGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTc > 2:1835151/1‑100 (MQ=255) aTAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATa < 2:3368343/100‑1 (MQ=255) cATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATc > 1:1283057/1‑99 (MQ=255) aTTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCAt > 1:2088664/1‑100 (MQ=255) aTTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCAt > 1:49260/1‑100 (MQ=255) tttGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTTTCACAATCAtt < 2:1909291/100‑1 (MQ=255) tttGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCAtt > 2:2889150/1‑100 (MQ=255) tggcGCACTGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGc < 2:3143154/97‑1 (MQ=255) tGACGCAATGCGCACTAAAAGGGCATCATTTGATGCTCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGc < 2:900078/100‑1 (MQ=255) aCGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTg < 1:2949116/100‑1 (MQ=255) cGCAATGCTCACTAAAAGGGCATCAGTTGATTCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTg < 1:1668203/99‑1 (MQ=255) cAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTgaga < 1:1695687/100‑1 (MQ=255) cAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTgaga > 1:2737215/1‑100 (MQ=255) aaTGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCATTGATTTTCTTTGTCATAATCATTGCTGAGAc > 2:1850634/1‑100 (MQ=255) tGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAg > 1:2403284/1‑100 (MQ=255) tGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAg < 1:125639/100‑1 (MQ=255) cgcACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGc < 1:420590/100‑1 (MQ=255) cgcACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGc < 1:3351238/100‑1 (MQ=255) cgcACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAAAACCTGGCTCATAAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGc > 2:833479/1‑100 (MQ=255) gcACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGct > 1:3633108/1‑100 (MQ=255) tgcaaaaaGGGCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGctc > 2:2701143/5‑100 (MQ=38) cACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTATTTGTCATAATCATTGCTGAGACAGGctc > 2:2187856/1‑100 (MQ=255) gcaaaaaGGGCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGctct > 1:2087626/4‑100 (MQ=39) cTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTg > 1:2592050/1‑100 (MQ=255) cTAAAAGGGCATCATATGATGCCCTTTTTGCACGC‑TTTCGTAACAGAACCTGGCTCATCAGTGAGTTTCTTTGTCATAATAATTGCTGAGCCAGGCTCTg > 2:642866/1‑100 (MQ=255) aaaaaGGGCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGt > 1:860114/2‑100 (MQ=255) aaaaGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGtt > 2:2727029/1‑100 (MQ=255) aaaaGGGCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGtt > 1:1590697/1‑100 (MQ=255) aaGGGCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGa > 1:205721/1‑100 (MQ=255) aaGGGCATCAAATGATGCCCTTTTAGTGCGCATTGCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTg > 1:1495416/1‑100 (MQ=21) gggCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAgg < 1:2614382/100‑1 (MQ=255) ggCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAggg > 1:2790566/1‑100 (MQ=255) gCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGATCTGTTGAggg > 2:3253623/1‑99 (MQ=255) catcatTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCg < 1:801868/100‑1 (MQ=255) catcatTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCg > 1:946234/1‑100 (MQ=255) catTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGtat < 2:19980/100‑1 (MQ=255) atTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGtata < 1:1931387/100‑1 (MQ=255) tttGATGCCGTTTTTGCATGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGtat < 2:1523480/98‑1 (MQ=255) | TCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATA > NC_000913/4177073‑4177269 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |